Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02413 ACCGGTTCCAGAAGGCCCAACAAGTCTTACCAGAAGGCAAGAAGAAAAGAGAGAAGGCTTCTCTACGGGCGTGCGCAGCGTGCAATTGCATCTGCAAGTTCCATCTTAGATTCACGAACTCCATAGCCGAAGTCGAAATTGCGATCATCTCAAGTCCCTTGTCGTCGAGATATTTCTCTCCGAATTGTCTCGCTTTGAACGGAACTGTACGTCACCATAATTTTGGTCCGCCATGGCTCCGCCTGCGCCGTCTCATCGAACTTCATCGCCGTCCCAACCATCAGGAAAAAGTGAAGTATCTGATCTGAAATCACAGCTCCGGCAGCTTGCTGGAAGCAGAGCACCGGGTGTTGAAGATTCCAAGAGGGAACTTTTTAAGAAAGTGATCTCATACATGACTATTGGAATTGATGTATCGTCTCTCTTTGGAGAGATGGTGATGTGCTCTGCTACATCAGACATTGTTCTCAAGAAAATGTGTTATCTTTACGTTGGCAATTATGCCAAGGTTAATCCTGATCTTGCTCTGCTCACAATTAATTTCCTTCAAAGAGATTGCAAGGATGATGATCCAATGATTAGAGGGCTTGCTTTGAGGAGTTTATGTTCCCTTCGGGTTGCAAATCTTGTTGAGTACCTGGTTGGGCCCTTGGGTTCTGGTTTGAAGGATAGCAATAGTTATGTGAGAATGGTTGCTGTTATTGGGGTTTTGAAGCTATATCGTATATCTGCTTCAACATGCACTGATGCTGATTTTCCAGCAACGCTGAAGCATTTGATGCTTAATGATCGAGATACTCAGGTAGTTGCAAATTGTTTATCTGCTTTACAAGAGATTTTGACCTCAGAAGCCAGCTCCTTAGAAGAAGCATCTAGAGAAAGAGAGGCTTTGCTCAGCAAGCCAGTTGTGTATTATCTTCTGAATCGGATCAAAGAATTTAATGAATGGGCACAGTGTCTCATACTTGAATTGGTTTCCAAATATGTACCGTCAGATAGCAATGAGATTTTTGACATCATGAATCTCCTTGAAGATCGTCTTCAGCATGCTAATGGTGCTGTGGTATTGGCAACCACCAAAGTTTTTCTACATTTGACTTTATCTATGACTGATGTTCATCAGCAGGTCTATGAACGGATTAAAGCCCCTCTCTTAACCTTAGTGAGCTCAGGAAGCCCAGAGCAATCTTATGCAGTTCTCAGCCACCTGCATCTCCTGGTGATGCGTGCTCCATTTGTATTTTCTGCAGACTATAAATACTTCTATTGTCAGTACAATGAGCCGTCTTATGTCAAAAAATTGAAGCTCGAAATGTTGACTGCAGTGGCGAATGAGAGCAACACTTACGAAATTGTGACAGAATTATGTGAATATGTTGCGAATGTTGATATTCCCATTGCAAGAGAGTCAATACGTGCTGTTGGAAAAATAGCACTGCAACAGTATGATGTTAATGCAATTGTTGATAGACTTCTGCAGTTTTTGGAGATGGAAAAGGACTATGTGACTGCTGAAGCTCTGGTGCTTGTTAAAGATCTTTTGAGAAAATATCCACAATGGAGTCATGATTGCATTGCTGTTGTCGGCAGCATCAGCAGTAAAAATATTCAAGAACCAAAGGCCAAAGCAGCCCTTATCTGGATGTTGGGGGAGTACTCACAGGACATGCAAGATGCCCCATATATTCTAGAGAGTTTAGTTGAAAACTGGGATGATGAGCCGTCTGCTGAGGTACGCCTACATCTTCTCACTGCAGTGATGAAGTGTTTCTTCAAAAGGCCTCCCGAAACTCAAAAGGCCTTGGGAGCTGCACTGGCAGTAGGTCTTGCTGATTTTCACCAGGATGTGCATGATCGAGCACTGTTCTACTACAGGCTTTTGCAATACAATGTTTCTGTAGCTGAACGTGTGGTCAATCCTCCAAAGCAAGCCGTTTCTGTATTTGCTGATACACAGAGCAGTGAAGTCAAGGATAGAATATTTGATGAATTTAACAGTTTGTCTGTTATTTATCAGAAGCCATCTTACATGTTCACTGACAAGGAACACCGCGGTCCATTTGAGTTCTCGGACGAACTTGGAAATTTATCTATTGGTGCAGAGTCTGCCGATTCTGTTGTTCCAGCTCAGCAAGTTGAGGCAAATGATAAGGATCTACTTCTAAGCGCCTCAGTGGAAGAGGAAACTAGAGTCGTTAGTAACAATGGTTCTGCATATAGTGCTCCTTCATATGAGGGCTCTATTGGATCTCTAATTCCTCAAGCGCCATTAGAATTTGCAGTATCAAATCCTTCCGTACCAGGCCCTGCTCCCCAGTCGAGCTCTCCATTTGATGATCTATTTGGTTTAGTTTCTGCTCCTGCTCCCACTCCGGCTCCCCCTGCACCTTCACCACCTCCATTGCAGCTAAATTCAAAAGCTGTTTTAGATCCAGGAACTTTTCAGCAGAAATGGCGCCAGCTGCCTATATCTATATCACAGGAATTTTCAGTAAGCCCTCGAGGGATCGCAGCGCTAACATCACCACAAGTCCTCCTCCGACACATGCAAAATCATTCTATTCATTCCATTGCATCCGGTGGCCAGGCACCTAACTTCAAAATTTTCTTCTTCGCACAAAAACAAGAAGAACCATCCAACTTTCTGGTGGAGTGCATAATCAATACAGCATCTGCCAAAGCACAGGTAAAGGTCAAAGCCGATGACCAAAGCGCATCGCAAACTTTCTCGTCTTTGTTCCAATCAGCTCTGGCTAACTTTGGTTTGCCATGAGTCTTCAGCATCAAGTTTTGCATGGTAAATCCCCTCATTCGAGTCACCTGCATCGACATAGGAACAGATGGATGAAGATAAACGAGGTAGCAATGGTTATGGAATTTCACATTGATTTGTAGTATAGATGAGTGTAATATGGGACTGAAAATGCTCCTCTTTCTGTTCGGAATCGTGGCCCTTACCAATTGCTTAGATTTTTGCTCCAAAATCTGTGGTATAAAAGCTGCTCCTCTGTAAAAGCTTTTGAAGTTTCAAGTCTTGTAGTTAGTTTTTTGTACTTCCCATCTCTGTTCGCTTCTTTTTAACTTCTGTTTTGGAAAAGAAAAGCTATGGTTTCTTACATCAGACTATTTTTCAGCCTTGTATGGAGGTAAATAATATCCAGGTTCCTTCGTCATTCTTGTTCCAAAACTCACTGGATAA 3199 42.86 MAPPAPSHRTSSPSQPSGKSEVSDLKSQLRQLAGSRAPGVEDSKRELFKKVISYMTIGIDVSSLFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDDDPMIRGLALRSLCSLRVANLVEYLVGPLGSGLKDSNSYVRMVAVIGVLKLYRISASTCTDADFPATLKHLMLNDRDTQVVANCLSALQEILTSEASSLEEASREREALLSKPVVYYLLNRIKEFNEWAQCLILELVSKYVPSDSNEIFDIMNLLEDRLQHANGAVVLATTKVFLHLTLSMTDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSHLHLLVMRAPFVFSADYKYFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYVANVDIPIARESIRAVGKIALQQYDVNAIVDRLLQFLEMEKDYVTAEALVLVKDLLRKYPQWSHDCIAVVGSISSKNIQEPKAKAALIWMLGEYSQDMQDAPYILESLVENWDDEPSAEVRLHLLTAVMKCFFKRPPETQKALGAALAVGLADFHQDVHDRALFYYRLLQYNVSVAERVVNPPKQAVSVFADTQSSEVKDRIFDEFNSLSVIYQKPSYMFTDKEHRGPFEFSDELGNLSIGAESADSVVPAQQVEANDKDLLLSASVEEETRVVSNNGSAYSAPSYEGSIGSLIPQAPLEFAVSNPSVPGPAPQSSSPFDDLFGLVSAPAPTPAPPAPSPPPLQLNSKAVLDPGTFQQKWRQLPISISQEFSVSPRGIAALTSPQVLLRHMQNHSIHSIASGGQAPNFKIFFFAQKQEEPSNFLVECIINTASAKAQVKVKADDQSASQTFSSLFQSALANFGLP 846
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 65616873 65624068 + XM_039042694.1 Bhi09g02413 45030

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02413 846 SUPERFAMILY ARM repeat 28 598 IPR016024 -
Bhi09g02413 846 MobiDBLite consensus disorder prediction 686 721 - -
Bhi09g02413 846 MobiDBLite consensus disorder prediction 1 25 - -
Bhi09g02413 846 SMART B2_adapt_app_C_2 724 841 IPR015151 GO:0006886|GO:0016192|GO:0030131
Bhi09g02413 846 Pfam Adaptin N terminal region 39 551 IPR002553 GO:0006886|GO:0016192|GO:0030117
Bhi09g02413 846 Gene3D - 13 608 IPR011989 -
Bhi09g02413 846 PANTHER AP-4 COMPLEX SUBUNIT BETA-1 16 844 - -
Bhi09g02413 846 Gene3D - 716 844 IPR012295 -
Bhi09g02413 846 MobiDBLite consensus disorder prediction 11 25 - -
Bhi09g02413 846 SUPERFAMILY Subdomain of clathrin and coatomer appendage domain 732 841 IPR009028 GO:0006886|GO:0016192|GO:0030117
Bhi09g02413 846 PANTHER ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER 16 844 IPR026739 GO:0016192
Bhi09g02413 846 PIRSF Beta_adaptin 10 846 IPR016342 GO:0015031|GO:0030276
Bhi09g02413 846 Pfam Beta2-adaptin appendage, C-terminal sub-domain 728 840 IPR015151 GO:0006886|GO:0016192|GO:0030131
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02413 - - - csv:101215264 1569.67
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02413 Bhi-Chr9:65616873 Bhi12g00287 Bhi-Chr12:8210048 4.49E-108 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g336 Blo01g01708 . . . . Bpe02g00235 . Bma01g02485 . . Cma01g01595 . . . . . . . . . . . . . . . . . . . . Cone4ag1537 Cone7ag1415 . . Lsi04g02220 Csa03g04432 Chy04g00267 . . . . . . . . . Sed05g1613 Cmo01g01643 . . . Car01g01214 . . Cpe02g00382 Bhi09g02413 Tan01g3774 Cmetu04g2386 . Hepe01g2114 Mch11g0652 . . . . . . . . . . . Cme04g00299
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010989 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 31