Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02480 AAAAGAGAAAAAAATAATTAATAATAAAAATAAATAGAGAGAGAGGCAAGAAGAATCCCAATGCCCAGAGATACAGACAGGAGAGCCTACTGTTTACACTCCATTGTCCTTGTGATCAGTTAAACTAATCCCTCCAAATTTCCATATCATTTCACACTCCTCTCAAATCACAGACTGGTTTGTTCTTGACGAGTTTTCAAGAAGGAGGGACTCTGATTTGTTGCACATGAGAGTGGATCAAGCTGAAGAAATGTCCGAAGACGAAGATCGGTCTTTACCTTCGGATCTAGGCGGCGGCGGCGGCGGCGACGCCATCGCTGAATCGGCTAGTAAGACTCGCAATTGCACAGGGTGTTCCGGTGATGTTACGGCTTCTGGTTCTGCTGAGAATATACTTCATAATGTTCTTGAGAACGTGCTTCACTTTCTTACTTCTCGTCGTGACCGGAACGCGGCTTCACTTGTTTGCAAGTCGTGGTATCGAGTTGAAGCCCTTACTCGATCCGACCTTTTTATTGCAAATTGCTATGCGGTTTCTCCTCGCCGAGTTACGTCGCGGTTTAATCGAGTTCGGTCAGTGACCATTAAAGGGAAGCCTCGGTTTGCAGATTTTAACCTGATGCCGCCCAATTGGGGAGCCCACTTTTCCCCATGGGTGGCGGCCATGGCTAAATCCTACCCTTGGCTTGAGAGAGTCTATTTGAAGCGCATGTCTGTGACTGACGACGATCTGGCCCTGCTTGCTGACTCTTTTCCTGGCTTTAAGGAGCTTGTGTTGTTTTGCTGTGAAGGATTTGGCACCAGTGGTATTGCTGTTGTTGCCACCAGATGCAGGCACCTTCGAGTACTTGATCTGATTGAATCTGACGTAGCAGACGATGAAGTGGATTGGATATCTTGTTTCCCAGAGAAGGAAACCTGTCTTGAATCTCTGATCTTTGACTGCGTAGAGTGGCCCATTAATTTTGAGGCACTAGAGAGGTTGGTGAGTAGATCCCCATCGTTGAAGAAACTTGGGGTGAATCGCCACGTTTCCATTGCTCAACTATACCATTTGATGATTCGGGCTCCAAGTCTAACATATCTGGGAACCGGTTCGTTCAGTACGTCAGAGGCTGTGGTTCATGGGGAGTCAGAGCCTGACTATGCCTCTGCTTTTGCTGCTTGCAAATCCTTAGTTTGTCTTTCTGGATTCAAGGACATTTTGCCTGATTACCTACCTTGTATCTATCCAGTATGTGCTAATCTCACCACTCTGAACTTGAGCTATGCAAATATAACTCCTGAACAACTCAAACCAGTTATAAGCCACTGCCACAAGCTCCAGACTTTCTGGGCTCTTGATTCAATATGTGATGATGGACTTCAGGCTGTTGCTTCCACCTGCAAGGAATTGCAAGAACTGAGGGTTTTCCCTGTTGATGTTCGAGAAGATGGAGAAGGCCCCATTTCTGAGGTGGGCTTCCAGGCAATATCTGAGGGTTGCAGGAAATTGCAATATATTCTCTACTTTTGCCAGAGAATGACCAATGCAGCTGTGGTAGCTATGTCACAGAACTGCCAAGATCTTGTGGTGTTTAGACTGTGTATTATGGGACGGCACCAGCCAGACCATAAAACTGGAGAACCCATGGATGAAGGATTTGGTGCCATTGTTATAAACTGTAAGAAGCTAACTAGGCTTGCGATATCTGGATTATTGACAGATCGTGCTTTCAGCTACATCGGGAAGTATGGGAAACTGGTACGCACCCTGTCAGTTGCTTTTGCTGGAAACAGTGATTTGGGATTGAAATATGTGCTTGAGGGCTGTCATAGATTGCAAAAACTTGAGATTAGAGATAGCCCATTTGGCGATGGAGCCTTGCGATCTGGTTTACATCATTACTATAATATGAGATTTCTCTGGATGTCAGCTTGTAAATTGTCTCGCCAAGGCTGCCAAGAGGTTGCCAGAGCCATGCCTCACTTAGTGGTTGAGGTGATGAGGAGTGATGAGGAAATTGAAAACGATGTTCAGGTGGAGGGTATGGAAGACCATGTCCAGGTGCTATATATGTATAGATCTCTTGAGGGGCCGAGGGATGATGCTCCAAAGTGTGTTGACATCCTATAGAATATTGGACTACTAGAAGATTCAACTGTCAGTGAGCACAGTCACAATTTTGTGCGATAAGTTTATTACTTCTTGTTAAAGGCTTATCCTTCAATACCTAAAAAAACCCATGTTTACCCACTTTAGAAAAGTTGGATGCCTGTTTTTTCATGGGGAAGATTATGATGGTTTTGGGAGCCATCCATGGAGTGGAAACATCTCATTTGAGAAATGGAACTTCCTGAGACTTTGAAAAGTGTAGTTGCTGAGGATTAATCTCCTTACTGTTCATCAGGAGGCTAATCAAGTTTTCATAAGTTTGTTTCTAATTGTTCCGTTTAATTTCTTCATTTCAATATTCGGTAACTGTAAACTAGAGCTGCTGGAGGAGACATGGGTCGTAGAGAGTTGCCTTAAAAGCTTAGATATCAATTATTGGTCATTTGTCGATTGAATCAAAAAAAGAAAAACATTTGTAAGAATTGGAGGATCTGTCAACTGCAAGTTCTATGAATATCTCTCCAACCATCAGGCCACCAATAGCAAGGGGATGACACAGGTACTCTTACTCAGTCCTACAATAATCATTAGTCCATTTATTTTGATTCAAATGGTTAGTAGATGTGAGAATTGAAAGACTCGGCCTCTCTAGCTAAATGTTGTTTATTTCTAATCAGATGTACCAGTAGTGTAGGCCCCAGATTATTGAGTTTACTATTGTTGTTTATTAGAAAATGTGAGATGGATGGGGTAATAAATGCCACAAATTATTCATGGACAGAATTTCCATATAATAATGGTACTGTCTCGTCCTTTTTTTCCCTCCTTTCTCCTCTCCATTTCTTTGTGCTAGCTAAATTAATCAGTCCTCTGTGATTTTATGCCACTGCACATTAGAAGTTTGCATATTTGAAGAATGTATAGGCACTTCAGAGCTATCTGAACTTCCTAGATTAGGTAAAAAAATTTGCTAGTTTTTGTTTGCTGAGTAGACTTTGTACGGCCGTTTTCAAATTGGTCACTTCAGGATCAATTATTTGATGACTTGTCACATCCCCTCCCTGAGTTTGCGTTATAAAGCAGCCATCCATTAA 3189 42.71 MRVDQAEEMSEDEDRSLPSDLGGGGGGDAIAESASKTRNCTGCSGDVTASGSAENILHNVLENVLHFLTSRRDRNAASLVCKSWYRVEALTRSDLFIANCYAVSPRRVTSRFNRVRSVTIKGKPRFADFNLMPPNWGAHFSPWVAAMAKSYPWLERVYLKRMSVTDDDLALLADSFPGFKELVLFCCEGFGTSGIAVVATRCRHLRVLDLIESDVADDEVDWISCFPEKETCLESLIFDCVEWPINFEALERLVSRSPSLKKLGVNRHVSIAQLYHLMIRAPSLTYLGTGSFSTSEAVVHGESEPDYASAFAACKSLVCLSGFKDILPDYLPCIYPVCANLTTLNLSYANITPEQLKPVISHCHKLQTFWALDSICDDGLQAVASTCKELQELRVFPVDVREDGEGPISEVGFQAISEGCRKLQYILYFCQRMTNAAVVAMSQNCQDLVVFRLCIMGRHQPDHKTGEPMDEGFGAIVINCKKLTRLAISGLLTDRAFSYIGKYGKLVRTLSVAFAGNSDLGLKYVLEGCHRLQKLEIRDSPFGDGALRSGLHHYYNMRFLWMSACKLSRQGCQEVARAMPHLVVEVMRSDEEIENDVQVEGMEDHVQVLYMYRSLEGPRDDAPKCVDIL 629
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 67200681 67204402 - XM_039042248.1 Bhi09g02480 45097

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02480 629 Pfam F-box 55 93 IPR041567 -
Bhi09g02480 629 Gene3D Ribonuclease Inhibitor 94 629 IPR032675 -
Bhi09g02480 629 MobiDBLite consensus disorder prediction 1 30 - -
Bhi09g02480 629 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 45 628 - -
Bhi09g02480 629 Pfam Transport inhibitor response 1 protein domain 114 159 IPR041101 -
Bhi09g02480 629 Gene3D - 47 92 - -
Bhi09g02480 629 SUPERFAMILY F-box domain 59 88 IPR036047 GO:0005515
Bhi09g02480 629 SUPERFAMILY RNI-like 80 586 - -
Bhi09g02480 629 SMART LRR_CC_2 480 503 IPR006553 -
Bhi09g02480 629 SMART LRR_CC_2 420 444 IPR006553 -
Bhi09g02480 629 PANTHER F-BOX PROTEIN FBX14 45 628 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02480 - - - csv:101206433 1205.28
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00499 Bhi-Chr3:9710889 Bhi09g02480 Bhi-Chr9:67200681 0 dispersed
Bhi07g00578 Bhi-Chr7:23876065 Bhi09g02480 Bhi-Chr9:67200681 1.09E-82 dispersed
Bhi09g02480 Bhi-Chr9:67200681 Bhi12g01780 Bhi-Chr12:57182398 5.06E-20 dispersed
Bhi09g02480 Bhi-Chr9:67200681 Bhi09g02481 Bhi-Chr9:67282530 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g477 . Blo12g00720 . Bda03g00467 Bpe02g00131 Bpe04g00428 Bma04g00441 Bma01g02595 . . Cma01g01635 Cma09g00584 . . . Cpe06g00446 . . . . . . . . . . . . . . . Cone4ag1311 Cone7ag1254 . . Lsi04g02267 Csa03g04477 Chy04g00224 . Blo17g00104 . Bda11g00786 Bda13g01371 . Bpe14g00475 . Bma02g00121 Sed05g1571 Cmo01g01680 Cmo09g00571 . . . Car09g00514 . . Bhi09g02480 Tan01g3834 Cmetu04g2278 . Hepe01g2158 Mch11g0695 . Cla11g01410 Cam11g1467 Cec11g1495 Cco11g1491 Clacu11g1628 Cmu11g1445 Cre11g1864 . . . Cme04g00250
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001591 5 2 2 4 3 0 3 2 2 2 2 2 3 2 2 3 2 2 3 2 2 1 2 2 2 2 2 5 2 1 69