Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02489 GGTTTCTCCTTGCAAGTCCCCAGATCGATGGTGTGTGATTTGGCCCAAAAGAATATATTGAGTTTCTTCGTCCTAAGGACGACGCATAAACCACACGACCACCGATCAAAGAGACATTGAGAGAGCAGAATCGTATTAATTGGAAGTTGAGGATTCATGGCTAATTTTGATAACGTTCATCTCTGATATGCATGGATCAAAGTTGCTCCGATCCGATCGCTGACTGACGGTTATTACACAACAACCGAGATTTCACCATTCCAGAAAGAAGCCAGGGTTTTTCTCCATCATCATCACAAAAAATCTATGGTCTATTTGGAATCTATATATAAGTGGACTTACCTCTCTTCTATTTGCACATAAAACTTGTTCAAAGCCAATGGCTTGTAAGTTTCTGTTTCCTCCCTTACTAGCTTCATTTCTTATACTTTTAACCCTTTTCACCTCTTCATCTGCTGAATATGATTCTCTCACTAATTTTCCCCCTTCAAAAGCCATTTGCAAATTCACCTCAAATCCTTCTTACTGCATCACCGTCCTTAAAAAATCCACAGGTGGTAATATCTACGACTCTGGCCGGTTTTCGATCCGTCGTTCTTTATCTAAAGCATCTAGATTCTTTGACTTGATTGAGAAGCATCTTCAAAACTCATCAACTCTACCAAAATCCATCACTGGAGCTCTTACAGATTCCGCAGGTTCTAGTTTGGAGAAGGATTTGTTAGCTCCACTTATTGATTGTACCAAATCATACAGTCTTTCACTCGATCTTTTTACGAAGGGTTGGGTTCCTAGGAGGAATAGAAACAGAACACTTGACCACCCTGGGAAAAAACACTTGCAGTTTAGGAAAGGACCGTTACCATTGAGAATGTCGAGACGCGACCGTGCAGTTTACGACTCGGTGGCAAATCGGAGAAAGCTGTCGTCTTCTTCAGATGATGGAGTTTTGGTTAATGGTATTGCAGTTGTGAGTCAAGATGGCAAAGGAGACTTCCTTAACATCACAGATGCTATTAATGCAGCTCCAAACAACTCTCTTGCTGCCAATGGCTACTTCTTGATTTACATTTCGGCTGGTGTTTACCAAGAATATGTGTCTATCCCTTCAAAGAAGAAGTATTTGCTGATGATTGGAGATGGTATAAATCAAACTATCATCACAGGCAACCATAGCGTCGTGGACGGATGGACGACTTTCAACAGTGCAACTTTTGCTGTAGCAGCAGAAGGATTCATGGCAGTAAATATAACTTTCCAAAACACAGCTGGAGCAATCAAAGGCCAAGCAGTTGCATTAAGAAGTGGAGCTGATATGTGTGTTTTCTACAGCTGCAGTTTTGAAGGCTACCAAGACACTTTATACACTCATTCCCTCAGGCAATTCTTTAGAGAATGTGACATTTATGGTACTGTAGACTTCATATTTGGAAATGCTGCTGTTGTCTTCCAAAACTGTAACATATATCCCCGTCTCCCCCGTCCCGGTCAGGCCAACATGATCACCGCTCAAGGCCGATCGGATCCGAACCAAAACACCGGGACTTCGATCCACAACTGCGCAATCCGAGCCACGAGCGATTTGGCTGCAAGTAGTAGCTATATGAACAAGACATATTTGGGAAGGCCATGGAAGCAATATTCAAGAACAGTGTACATGCAAACATTTATAGATGGATTTGTAAATCCTAGTGGTTGGGATCCATGGACAGGGGAATATTTGAGCACATTGTATTATGGAGAGTATAATAATACAGGAGATGGATCAAATACAAAGAACAGAGTTAATTGGGCAGGTTATCATGTGATTAATAATGCAACAGATGCTGCTAATTTTACAGTTTCAAATTTCTTGGTTGGGGATGTGTGGTTACCTCAAACTTGTGTGCCTTACACTGGAGCCTTCATATAAGTGGTCTCAGCTATATTATTCTATGTGTTCTTTTTGTAATGGCTAATCCTTAATTTTCCTCATATTCAACTCGACAAGTAAGGTTGTTTGTACTCTTAATTCAACTAATGCTATTTTTTTTAATCTCATTTCCAAGATAATAATATGATTAAGGGTGTACTCCCTAATG 2081 40.56 MACKFLFPPLLASFLILLTLFTSSSAEYDSLTNFPPSKAICKFTSNPSYCITVLKKSTGGNIYDSGRFSIRRSLSKASRFFDLIEKHLQNSSTLPKSITGALTDSAGSSLEKDLLAPLIDCTKSYSLSLDLFTKGWVPRRNRNRTLDHPGKKHLQFRKGPLPLRMSRRDRAVYDSVANRRKLSSSSDDGVLVNGIAVVSQDGKGDFLNITDAINAAPNNSLAANGYFLIYISAGVYQEYVSIPSKKKYLLMIGDGINQTIITGNHSVVDGWTTFNSATFAVAAEGFMAVNITFQNTAGAIKGQAVALRSGADMCVFYSCSFEGYQDTLYTHSLRQFFRECDIYGTVDFIFGNAAVVFQNCNIYPRLPRPGQANMITAQGRSDPNQNTGTSIHNCAIRATSDLAASSSYMNKTYLGRPWKQYSRTVYMQTFIDGFVNPSGWDPWTGEYLSTLYYGEYNNTGDGSNTKNRVNWAGYHVINNATDAANFTVSNFLVGDVWLPQTCVPYTGAFI 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 67412348 67419042 - XM_039042505.1 Bhi09g02489 45106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02489 510 PANTHER PECTINESTERASE 15 105 - -
Bhi09g02489 510 PANTHER PECTINESTERASE 107 507 - -
Bhi09g02489 510 PANTHER PECTINESTERASE 107 507 - -
Bhi09g02489 510 PANTHER PECTINESTERASE 15 105 - -
Bhi09g02489 510 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 103 IPR035513 -
Bhi09g02489 510 ProSitePatterns Pectinesterase signature 2. 342 351 IPR033131 -
Bhi09g02489 510 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 145 IPR035513 -
Bhi09g02489 510 Gene3D - 195 510 IPR012334 -
Bhi09g02489 510 SUPERFAMILY Pectin lyase-like 192 506 IPR011050 -
Bhi09g02489 510 Pfam Pectinesterase 196 495 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02489 Bhi-Chr9:67412348 Bhi09g02491 Bhi-Chr9:67412350 0 dispersed
Bhi09g02489 Bhi-Chr9:67412348 Bhi09g02490 Bhi-Chr9:67412350 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02489 K01051 - csv:101205879 789.26