Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02491 GGTTTCTCCTTGCAAGTCCCCAGATCGATGGTGTGTGATTTGGCCCAAAAGAATATATTGAGTTTCTTCGTCCTAAGGACGACGCATAAACCACACGACCACCGATCAAAGAGACATTGAGAGAGCAGAATCGTATTAATTGGAAGTTGAGGATTCATGGCTAATTTTGATAACGTTCATCTCTGATATGCATGGATCAAAGTTGCTCCGATCCGATCGCTGACTGACGGTTATTACACAACAACCGAGGTGCATCCTACCAAAATTACGGATCATAACTTATCATGTGGCAAATTCTTCTTATTCCCTTTCTCAAATGTCTAAGTTATTTTTTTGGTATGAGTGATGTGAGAGGATGTCTAAAGATAGGTGCATTGTAGAATGCAGCCAAGTACTAAAAAAAAAAAAAAAAAAAAAAACTTCAAACCTCTCTGAAATTTTTCATTATTCCCCCTTCTTCTCTCCGAGCTCACGGTTTAGCTTCAAACTCACATGGGAAGTCCACCATTGGTTTCGCATTGTGATGTTCAAGAAAAGCAAATAAATCTTGCATTTACTTTAGTCTCGTCTCTTAGCACAACATTTAAGGAAGCATGGATTACTCAATCTAGCATTTCACCATTCCAGAAAGAAGCCAGGGTTTTTCTCCATCATCATCACAAAAAATCTATGGTCTATTTGGAATCTATATATAAGTGGACTTACCTCTCTTCTATTTGCACATAAAACTTGTTCAAAGCCAATGGCTTGTAAGTTTCTGTTTCCTCCCTTACTAGCTTCATTTCTTATACTTTTAACCCTTTTCACCTCTTCATCTGCTGAATATGATTCTCTCACTAATTTTCCCCCTTCAAAAGCCATTTGCAAATTCACCTCAAATCCTTCTTACTGCATCACCGTCCTTAAAAAATCCACAGGTGGTAATATCTACGACTCTGGCCGGTTTTCGATCCGTCGTTCTTTATCTAAAGCATCTAGATTCTTTGACTTGATTGAGAAGCATCTTCAAAACTCATCAACTCTACCAAAATCCATCACTGGAGCTCTTACAGATTGTCAGTATCTTGCTCAACTGAATATCAATTTCTTGTCGAATTCGTTTCGGGCCGTTAACGGCACTGATAAAAAGCTAACTTACTCAAAAGCTGATTATATCCAGAGTCTTCTTAGTGCCATCTTAACCAACATTGATACTTGTCTTGATGGTCTAAAAACTGTAGCCGCAGGTTCTAGTTTGGAGAAGGATTTGTTAGCTCCACTTATTGATTGTACCAAATCATACAGTCTTTCACTCGATCTTTTTACGAAGGGTTGGGTTCCTAGGAGGAATAGAAACAGAACACTTGACCACCCTGGGAAAAAACACTTGCAGTTTAGGAAAGGACCGTTACCATTGAGAATGTCGAGACGCGACCGTGCAGTTTACGACTCGGTGGCAAATCGGAGAAAGCTGTCGTCTTCTTCAGATGATGGAGTTTTGGTTAATGGTATTGCAGTTGTGAGTCAAGATGGCAAAGGAGACTTCCTTAACATCACAGATGCTATTAATGCAGCTCCAAACAACTCTCTTGCTGCCAATGGCTACTTCTTGATTTACATTTCGGCTGGTGTTTACCAAGAATATGTGTCTATCCCTTCAAAGAAGAAGTATTTGCTGATGATTGGAGATGGTATAAATCAAACTATCATCACAGGCAACCATAGCGTCGTGGACGGATGGACGACTTTCAACAGTGCAACTTTTGCTGTAGCAGCAGAAGGATTCATGGCAGTAAATATAACTTTCCAAAACACAGCTGGAGCAATCAAAGGCCAAGCAGTTGCATTAAGAAGTGGAGCTGATATGTGTGTTTTCTACAGCTGCAGTTTTGAAGGCTACCAAGACACTTTATACACTCATTCCCTCAGGCAATTCTTTAGAGAATGTGACATTTATGGTACTGTAGACTTCATATTTGGAAATGCTGCTGTTGTCTTCCAAAACTGTAACATATATCCCCGTCTCCCCCGTCCCGGTCAGGCCAACATGATCACCGCTCAAGGCCGATCGGATCCGAACCAAAACACCGGGACTTCGATCCACAACTGCGCAATCCGAGCCACGAGCGATTTGGCTGCAAGTAGTAGCTATATGAACAAGACATATTTGGGAAGGCCATGGAAGCAATATTCAAGAACAGTGTACATGCAAACATTTATAGATGGATTTGTAAATCCTAGTGGTTGGGATCCATGGACAGGGGAATATTTGAGCACATTGTATTATGGAGAGTATAATAATACAGGAGATGGATCAAATACAAAGAACAGAGTTAATTGGGCAGGTTATCATGTGATTAATAATGCAACAGATGCTGCTAATTTTACAGTTTCAAATTTCTTGGTTGGGGATGTGTGGTTACCTCAAACTTGTGTGCCTTACACTGGAGCCTTCATATAAGTGGTCTCAGCTATATTATTCTATGTGTTCTTTTTGTAATGGCTAATCCTTAATTTTCCTCATATTCAACTCGACAAGTAAGGTTGTTTGTACTCTTAATTCAACTAATGCTATTTTTTTTAATCTCATTTCCAAGATAATAATATGATTAAGGGTGTACTCCCTAA 2607 39.66 MACKFLFPPLLASFLILLTLFTSSSAEYDSLTNFPPSKAICKFTSNPSYCITVLKKSTGGNIYDSGRFSIRRSLSKASRFFDLIEKHLQNSSTLPKSITGALTDCQYLAQLNINFLSNSFRAVNGTDKKLTYSKADYIQSLLSAILTNIDTCLDGLKTVAAGSSLEKDLLAPLIDCTKSYSLSLDLFTKGWVPRRNRNRTLDHPGKKHLQFRKGPLPLRMSRRDRAVYDSVANRRKLSSSSDDGVLVNGIAVVSQDGKGDFLNITDAINAAPNNSLAANGYFLIYISAGVYQEYVSIPSKKKYLLMIGDGINQTIITGNHSVVDGWTTFNSATFAVAAEGFMAVNITFQNTAGAIKGQAVALRSGADMCVFYSCSFEGYQDTLYTHSLRQFFRECDIYGTVDFIFGNAAVVFQNCNIYPRLPRPGQANMITAQGRSDPNQNTGTSIHNCAIRATSDLAASSSYMNKTYLGRPWKQYSRTVYMQTFIDGFVNPSGWDPWTGEYLSTLYYGEYNNTGDGSNTKNRVNWAGYHVINNATDAANFTVSNFLVGDVWLPQTCVPYTGAFI 565
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 67412350 67419042 - XM_039042503.1 Bhi09g02491 45108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02491 565 Pfam Pectinesterase 251 550 IPR000070 GO:0030599|GO:0042545
Bhi09g02491 565 ProSitePatterns Pectinesterase signature 2. 397 406 IPR033131 -
Bhi09g02491 565 Gene3D - 250 565 IPR012334 -
Bhi09g02491 565 PANTHER PECTINESTERASE 15 562 - -
Bhi09g02491 565 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 189 IPR035513 -
Bhi09g02491 565 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 160 IPR006501 GO:0004857
Bhi09g02491 565 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 189 IPR035513 -
Bhi09g02491 565 SMART PMEI_2 32 186 IPR006501 GO:0004857
Bhi09g02491 565 CDD PMEI-like_3 39 191 - -
Bhi09g02491 565 PANTHER PECTINESTERASE 15 562 - -
Bhi09g02491 565 SUPERFAMILY Pectin lyase-like 248 561 IPR011050 -
Bhi09g02491 565 Pfam Plant invertase/pectin methylesterase inhibitor 38 166 IPR006501 GO:0004857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02489 Bhi-Chr9:67412348 Bhi09g02491 Bhi-Chr9:67412350 0 dispersed
Bhi09g02491 Bhi-Chr9:67412350 Bhi09g02493 Bhi-Chr9:67412351 0 dispersed
Bhi09g02490 Bhi-Chr9:67412350 Bhi09g02491 Bhi-Chr9:67412350 0 tandem
Bhi09g02491 Bhi-Chr9:67412350 Bhi09g02492 Bhi-Chr9:67412350 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02491 K01051 - csv:101205879 1034.25