Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02493 GGTTTCTCCTTGCAAGTCCCCAGATCGATGGTGTGTGATTTGGCCCAAAAGAATATATTGAGTTTCTTCGTCCTAAGGACGACGCATAAACCACACGACCACCGATCAAAGAGACATTGAGAGAGCAGAATCGTATTAATTGGAAGTTGAGGATTCATGGCTAATTTTGATAACGTTCATCTCTGATATGCATGGATCAAAGTTGCTCCGATCCGATCGCTGACTGACGGTTATTACACAACAACCGAGATTTCACCATTCCAGAAAGAAGCCAGGGTTTTTCTCCATCATCATCACAAAAAATCTATGGTCTATTTGGAATCTATATATAAGTGGACTTACCTCTCTTCTATTTGCACATAAAACTTGTTCAAAGCCAATGGCTTGTGGTAATATCTACGACTCTGGCCGGTTTTCGATCCGTCGTTCTTTATCTAAAGCATCTAGATTCTTTGACTTGATTGAGAAGCATCTTCAAAACTCATCAACTCTACCAAAATCCATCACTGGAGCTCTTACAGATTGTCAGTATCTTGCTCAACTGAATATCAATTTCTTGTCGAATTCGTTTCGGGCCGTTAACGGCACTGATAAAAAGCTAACTTACTCAAAAGCTGATTATATCCAGAGTCTTCTTAGTGCCATCTTAACCAACATTGATACTTGTCTTGATGGTCTAAAAACTGTAGCCGCAGGTTCTAGTTTGGAGAAGGATTTGTTAGCTCCACTTATTGATTGTACCAAATCATACAGTCTTTCACTCGATCTTTTTACGAAGGGTTGGGTTCCTAGGAGGAATAGAAACAGAACACTTGACCACCCTGGGAAAAAACACTTGCAGTTTAGGAAAGGACCGTTACCATTGAGAATGTCGAGACGCGACCGTGCAGTTTACGACTCGGTGGCAAATCGGAGAAAGCTGTCGTCTTCTTCAGATGATGGAGTTTTGGTTAATGGTATTGCAGTTGTGAGTCAAGATGGCAAAGGAGACTTCCTTAACATCACAGATGCTATTAATGCAGCTCCAAACAACTCTCTTGCTGCCAATGGCTACTTCTTGATTTACATTTCGGCTGGTGTTTACCAAGAATATGTGTCTATCCCTTCAAAGAAGAAGTATTTGCTGATGATTGGAGATGGTATAAATCAAACTATCATCACAGGCAACCATAGCGTCGTGGACGGATGGACGACTTTCAACAGTGCAACTTTTGCTGTAGCAGCAGAAGGATTCATGGCAGTAAATATAACTTTCCAAAACACAGCTGGAGCAATCAAAGGCCAAGCAGTTGCATTAAGAAGTGGAGCTGATATGTGTGTTTTCTACAGCTGCAGTTTTGAAGGCTACCAAGACACTTTATACACTCATTCCCTCAGGCAATTCTTTAGAGAATGTGACATTTATGGTACTGTAGACTTCATATTTGGAAATGCTGCTGTTGTCTTCCAAAACTGTAACATATATCCCCGTCTCCCCCGTCCCGGTCAGGCCAACATGATCACCGCTCAAGGCCGATCGGATCCGAACCAAAACACCGGGACTTCGATCCACAACTGCGCAATCCGAGCCACGAGCGATTTGGCTGCAAGTAGTAGCTATATGAACAAGACATATTTGGGAAGGCCATGGAAGCAATATTCAAGAACAGTGTACATGCAAACATTTATAGATGGATTTGTAAATCCTAGTGGTTGGGATCCATGGACAGGGGAATATTTGAGCACATTGTATTATGGAGAGTATAATAATACAGGAGATGGATCAAATACAAAGAACAGAGTTAATTGGGCAGGTTATCATGTGATTAATAATGCAACAGATGCTGCTAATTTTACAGTTTCAAATTTCTTGGTTGGGGATGTGTGGTTACCTCAAACTTGTGTGCCTTACACTGGAGCCTTCATATAAGTGGTCTCAGCTATATTATTCTATGTGTTCTTTTTGTAATGGCTAATCCTTAATTTTCCTCATATTCAACTCGACAAGTAAGGTTGTTTGTACTCTTAATTCAACTAATGCTATTTTTTTTAATCTCATTTCCAAGATAATAATATGATTAAGGGTGTACTCCCTA 2075 40.58 MACGNIYDSGRFSIRRSLSKASRFFDLIEKHLQNSSTLPKSITGALTDCQYLAQLNINFLSNSFRAVNGTDKKLTYSKADYIQSLLSAILTNIDTCLDGLKTVAAGSSLEKDLLAPLIDCTKSYSLSLDLFTKGWVPRRNRNRTLDHPGKKHLQFRKGPLPLRMSRRDRAVYDSVANRRKLSSSSDDGVLVNGIAVVSQDGKGDFLNITDAINAAPNNSLAANGYFLIYISAGVYQEYVSIPSKKKYLLMIGDGINQTIITGNHSVVDGWTTFNSATFAVAAEGFMAVNITFQNTAGAIKGQAVALRSGADMCVFYSCSFEGYQDTLYTHSLRQFFRECDIYGTVDFIFGNAAVVFQNCNIYPRLPRPGQANMITAQGRSDPNQNTGTSIHNCAIRATSDLAASSSYMNKTYLGRPWKQYSRTVYMQTFIDGFVNPSGWDPWTGEYLSTLYYGEYNNTGDGSNTKNRVNWAGYHVINNATDAANFTVSNFLVGDVWLPQTCVPYTGAFI 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 67412351 67419042 - XM_039042506.1 Bhi09g02493 45110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02493 509 Pfam Plant invertase/pectin methylesterase inhibitor 12 110 IPR006501 GO:0004857
Bhi09g02493 509 ProSitePatterns Pectinesterase signature 2. 341 350 IPR033131 -
Bhi09g02493 509 Gene3D - 194 509 IPR012334 -
Bhi09g02493 509 CDD PMEI-like_3 5 135 - -
Bhi09g02493 509 SMART PMEI_2 1 130 IPR006501 GO:0004857
Bhi09g02493 509 Pfam Pectinesterase 195 494 IPR000070 GO:0030599|GO:0042545
Bhi09g02493 509 Gene3D Invertase/pectin methylesterase inhibitor family protein 2 133 IPR035513 -
Bhi09g02493 509 PANTHER PECTINESTERASE 4 506 - -
Bhi09g02493 509 PANTHER PECTINESTERASE 4 506 - -
Bhi09g02493 509 SUPERFAMILY Pectin lyase-like 191 505 IPR011050 -
Bhi09g02493 509 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 5 133 IPR035513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02491 Bhi-Chr9:67412350 Bhi09g02493 Bhi-Chr9:67412351 0 dispersed
Bhi09g02493 Bhi-Chr9:67412351 Bhi10g02285 Bhi-Chr10:58657033 0 dispersed
Bhi09g02492 Bhi-Chr9:67412350 Bhi09g02493 Bhi-Chr9:67412351 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02493 K01051 - csv:101205879 964.911