Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi09g02517 | GGGAAATACTATCAGTTGAACATATAAAAGGGAAACTCTTTCCTGGTAAGGAAGTTCTGGAAATCATCAGCTAGGACGAGGGATTAGGCTTTGCTAAAAATGGCAAATGAGATACTCCAATTGGATATTCAGGATCATCATGTAGTTATGGACAATGGTATATTGCAAGTGACACTGTCCAAGCCAGATGGAAATGTTACTGGGATAAAATACAACAGCATTGACAATGTTTTAGAAGTTGATGATAAGGAAGCTCATAGAGGGTACTGGGACCTTGTGTGGAACTCTGGGACTCCAGGAACGACAGGAACCTTCGATGAGATGAGAGGAAAAGAATTTGAAGTGATTGTGCAAAATGAGGAACAGATAGAGCTCTCATTTAAAAGGAATTATCCATTTAAGGACGAGGCTGTTCCCTTAAATATAGACAAAAGGTTCATAATGCTTCGTAACTCCTCTGGATTCTACTCCTATGCCATCTATGAGCACATGAAGGAATGGCCACCATTCAACCTTCCCCAAACAAGGATTGTGTTTAAGCTAAGAAAAGACAAGTTTCATTATATGGCCATAGCAGATGACAGACGGAGATTCATGCCACTTCCTGAGGATAGACTACGTCATAGAGGAAAACCTTTGGATTTTCCGGAGGCTGTATTGCTAGTCAATCCTAAAGAACCCAAGTTCAAGGGAGAGGTGGATGATAAGTACCAATATTCTTGTGAAAATAAAGATCTTAAAGTGCATGGATGGATATCCATGGATCCTCCAGTGGGTTTCTGGCAAATCACTCCAAGCAGTGAGTTCAGATCAGGTGGACCCCTCAAACAGAATCTTACCTCTCATGTGGGTCCATATGCTCTTGCTATGTTCCTCAGCGCTCATTATTCAGGAGAGGACTTGGTGCTGAAGCTCAGTCCTGATGAACCATGGAAGAAAGTTTTTGGCCCTGTGTTTTTCTATCTAAATTCTGTTTCTGATGGAGTTGATCCACTTTCTTTGTGGGAAGATGCTAAAACTCAGATGACGAAGGAAGTTCAAAGCTGGCCCTATTCTTTTCCAGCTTCTGAGGATTTCCCCCCACCAAACCAACGTGGTAGATTGACTGGCAAATTATTTGTCCTTGACAGATATGTTAATCAAGATAAAATGCTGGCAACTGATGCATATGTGGGACTGGCAGCACCAGGAGATGCTGGATCATGGCAGACCGAAAACAAGGGTTACCAGTTTTGGACCAAAACAGATGCAGATGGCTCGTTTAGCATTGAACACATACGCATCGGCGACTACAATCTTTATGCTTGGGTTCCTGGCTTCATTGGTGACTACCGTTATGATGCTGTCATTAGTGTCTCTGCAGGTAGTGATATGGACGTAGGTGATCTTGTTTATGAGCCGCCTAGGAATGGGCCGACATTGTGGGAAATAGGAATTCCTGATCGCTCTGCTGCTGAATTCTATGTTCCTGATCCTGATCCAAAGTACATTAACAAATTGTATGTCAATCATCCGGATAGATTCAGGCAATATGGACTGTGGGAAAAATATGCAGAGTTATATCCTGATGCAGACTTAGTATATACAGTTGGTGTCAGTGATTACACAAAAGATTGGTTCTTTGCTCATGTTAATCGAACGAGAAATGATGGATCCCATTTAGCAACCACGTGGGAAATCAAGTTTACACTTGATAATGTCATAGAAAAGAGCGGCACCTATACGTTGCGAGTGGCTCTGGCCACCGCCAATGTTGCTGAATTACAGATCCAGGTAAATAATCCAGAAGCAAAGCCTAGTTTATTTACAACAGGAGTGATTGGGCATGACAATACAATTGCTAGGCATGGAATTCATGGACTCTATCGACTCTACAGTGTGGACATATTAGGATCTCTACTGGTGGAAGGAGATAACACCATCTTCCTTTCACAAATTATAAACAACTCATCTTTCAATGGCGTCATGTATGATTATATCCGCCTCGAAGGCCCTCCATCCGACACCTCTACTTCATAAACTATCCTTTTTTTCCTTTTAACATTGCAAAATTTGACCTTTCAATGATTATTATCATCTTAGTATTGTAAATTTATGAAACTTTGGCTGATTGATATTTGCATCAGCTTAACCCATGTCACCTTATAATTCAAAATTTGAGCATAATTCAATTGA | 2175 | 41.1 | MANEILQLDIQDHHVVMDNGILQVTLSKPDGNVTGIKYNSIDNVLEVDDKEAHRGYWDLVWNSGTPGTTGTFDEMRGKEFEVIVQNEEQIELSFKRNYPFKDEAVPLNIDKRFIMLRNSSGFYSYAIYEHMKEWPPFNLPQTRIVFKLRKDKFHYMAIADDRRRFMPLPEDRLRHRGKPLDFPEAVLLVNPKEPKFKGEVDDKYQYSCENKDLKVHGWISMDPPVGFWQITPSSEFRSGGPLKQNLTSHVGPYALAMFLSAHYSGEDLVLKLSPDEPWKKVFGPVFFYLNSVSDGVDPLSLWEDAKTQMTKEVQSWPYSFPASEDFPPPNQRGRLTGKLFVLDRYVNQDKMLATDAYVGLAAPGDAGSWQTENKGYQFWTKTDADGSFSIEHIRIGDYNLYAWVPGFIGDYRYDAVISVSAGSDMDVGDLVYEPPRNGPTLWEIGIPDRSAAEFYVPDPDPKYINKLYVNHPDRFRQYGLWEKYAELYPDADLVYTVGVSDYTKDWFFAHVNRTRNDGSHLATTWEIKFTLDNVIEKSGTYTLRVALATANVAELQIQVNNPEAKPSLFTTGVIGHDNTIARHGIHGLYRLYSVDILGSLLVEGDNTIFLSQIINNSSFNGVMYDYIRLEGPPSDTSTS | 639 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 68184127 | 68190315 | - | XM_039043464.1 | Bhi09g02517 | 45134 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi09g02517 | 639 | CDD | RGL4_M | 331 | 430 | IPR029413 | - | |
| Bhi09g02517 | 639 | Gene3D | - | 328 | 427 | - | - | |
| Bhi09g02517 | 639 | Gene3D | - | 7 | 271 | IPR014718 | GO:0030246 | |
| Bhi09g02517 | 639 | SUPERFAMILY | Galactose mutarotase-like | 13 | 291 | IPR011013 | GO:0003824|GO:0005975|GO:0030246 | |
| Bhi09g02517 | 639 | CDD | RGL4_C | 442 | 630 | - | - | |
| Bhi09g02517 | 639 | Pfam | Polysaccharide lyase family 4, domain III | 440 | 629 | IPR029411 | - | |
| Bhi09g02517 | 639 | Pfam | Rhamnogalacturonate lyase family | 7 | 200 | IPR010325 | - | |
| Bhi09g02517 | 639 | PANTHER | RHAMNOGALACTURONATE LYASE FAMILY PROTEIN | 1 | 637 | - | - | |
| Bhi09g02517 | 639 | PANTHER | RHAMNOGALACTURONATE LYASE B-RELATED | 1 | 637 | - | - | |
| Bhi09g02517 | 639 | Pfam | Polysaccharide lyase family 4, domain II | 355 | 425 | IPR029413 | - | |
| Bhi09g02517 | 639 | SUPERFAMILY | Galactose-binding domain-like | 437 | 630 | IPR008979 | - | |
| Bhi09g02517 | 639 | SUPERFAMILY | Starch-binding domain-like | 329 | 427 | IPR013784 | GO:0030246 | |
| Bhi09g02517 | 639 | CDD | RGL4_N | 14 | 294 | - | - | |
| Bhi09g02517 | 639 | Gene3D | - | 438 | 630 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi09g02517 | Bhi-Chr9:68184127 | Bhi09g02523 | Bhi-Chr9:68203664 | 0 | dispersed | |
| Bhi09g02517 | Bhi-Chr9:68184127 | Bhi09g02518 | Bhi-Chr9:68190288 | 0 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi09g02517 | K18195 | - | csv:101204193 | 1273.84 |