Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02518 GGAAAAGAAAAACAGAGAGAAAAAAGAGAGAATGATTTGCCTTTTGGTTCAAGTAAACAAAGCCGAGCTATAAAGATAAAACAAAGGTTCCCTTCTAAGTTGTCTGAAATTAAACTTTTTATTTATTTATTTATTTTTATTGTCTTTACGTAGGAAAATTTCGAAAAAAATTGAGGGAAATGAAAAACAGTAAAAAATTTCCGTCAAATTTATTTTGCCTTTTCTCTTCTTCTCTTCTCTTTTACTTTCACGCGCCCTTCATCTCTGCAACAACAACAACACAGCCTCCTCTTGAGGCTCTGCGCCAGTTTTCTTCTTCATTGTCGTCGATGAAACTTCTCGACGGCCGCCGCTGCCGACGGACGCGACCCCGACGCGGCGCCACCTCCTCCTGCGATTACGCATTCACGACCAACATGTTGTAATGGACAACGGCATAATCGGGGTCAACTTGTCGAATCCAAAGGGTATGGTCATTGGAATACAATACAAAGGGGTTGAAAACTTGCTTGAGGTTGGCAATGCCGAAGATGATAGAGGATATTGGGACATCGTTTGGAATCTGGCAGGAAGTTCAGGAACAAAGGGCATTTTCGATCGACTTGAAGCAACAGATTTCAAGGTAATTGTAGAAAATGATGAACAAATAGAACTCTCATTCAGCAGAACTTACAATTCATCCACCGGAGGCGATCTCATTCCCTTAAACATCGACAAAAGGTTCGTGATGCTTCGTAATTCATCAGGATTCTATTCGTACGCCATTTACGAACACTTGAAAGAATGGCCTGCGTTTATCATCGACAACACTAGAATCGTATTCAAGCCCCGAAAAGACAAGTTTCATTACATGGCTGTAGCAGATAAGAGACAGAGATTCATGCCTTTGCCCGACGATCGGAAGCCACCGCAAGGGGAAGCCCTAGCTTATCCGGAGGCCGTACTTCTTGTCGATCCTATAGAACCAGAGTTCAAGGGAGAGGTGGATGACAAGTACCAATACGGCTGCGAAAGCAAAGACGCTCGGGTTCACGGGTGGATATCCACCGACCCGCCCATTGGCTTTTGGCATATCGCACCCACCGAGGAGTTCCGCTCCGGTGGACCCCTCAAACAGTTTCTCACCTCCCATGTCGGTCCCACAACCCTTACTGTTTTTCATAGTGCTCATTACGCAGGAGAGGATATGGTTGTAAAGTTCGGATGTAATGAGCCATGGAAGAAGGTTTTCGGTCCTATCTTTATCCATCTTAATTCCTTTCCTGAAGGAGAGGATCCGCTTAGACTCTGGCAAAATGCTAAAGAACAGATGATGGCTGAAGTTCAAAGCTGGCCTTACGGTTTCCTTGCTTCTGAGGATTTTCCCAAATCCGATCAACGAGGCACCGTCAACGGCAGATTGATAATCCGGGAGAGATATGTGAGTGATGAATATGTGCCTGCAAGTGGTGCATATGTGGGGTTGGCACTTCCTGGAGAACTTGGCTCTTGGCAAACCGAAAGCAAGGGCTACCAATTCTGGACTAGAGCAGATCAGAATGGATCTTTCTCTTTGAATAATGTTCGCAGCGGAAATTATAGTCTCTATGGATGGGTCCCCAATTTTATTGGCAATTACCAATACAACGCTTTCATCGCCGTAACCCCAGGCAGTGATATCAATGTGGGAGAACTTGTTTTTGAGCCCCCAAGAGATGGTCCAACATTGTGGGAAATAGGCATTCCTGACCGTACTGCTGCAGAATTCTATGTGCCAGATCCTAATCCAAAGTATATTAATAAACTTTATGTCAATCATTCAGATAGGTTTAGGCAGTATGGATTATGGGAAAGATACACAGAGTTATATCCTGACGAGGATCTAGTTTATACAGTCGACCTTAGTGACTATAGAAAAGATTGGTTCTTTGCACAGGTTACCAGGAAGATAGAGGACAACAAATATGCTGGAACTACCTGGAAAATAAAGTTCCAACTTGACAGTCCAGATACACATGGAACATATAGGCTGCGTCTTGCATTGGCCACTGCACATGCTGCAGAATTACAAATTCGCAGTTGAAGTTAAATGTATGAAACAAGATGCTTTAGAGGATTAGAAAAAAGGGCACTATAAATATTTTCTTTTCCGACTGCAAGTCTTGTCATTTCACAAAATCCGGGAAATACTATCAGTTGAACATATAAA 2188 43.24 MDNGIIGVNLSNPKGMVIGIQYKGVENLLEVGNAEDDRGYWDIVWNLAGSSGTKGIFDRLEATDFKVIVENDEQIELSFSRTYNSSTGGDLIPLNIDKRFVMLRNSSGFYSYAIYEHLKEWPAFIIDNTRIVFKPRKDKFHYMAVADKRQRFMPLPDDRKPPQGEALAYPEAVLLVDPIEPEFKGEVDDKYQYGCESKDARVHGWISTDPPIGFWHIAPTEEFRSGGPLKQFLTSHVGPTTLTVFHSAHYAGEDMVVKFGCNEPWKKVFGPIFIHLNSFPEGEDPLRLWQNAKEQMMAEVQSWPYGFLASEDFPKSDQRGTVNGRLIIRERYVSDEYVPASGAYVGLALPGELGSWQTESKGYQFWTRADQNGSFSLNNVRSGNYSLYGWVPNFIGNYQYNAFIAVTPGSDINVGELVFEPPRDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNHSDRFRQYGLWERYTELYPDEDLVYTVDLSDYRKDWFFAQVTRKIEDNKYAGTTWKIKFQLDSPDTHGTYRLRLALATAHAAELQIRS 545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 68190288 68199342 - XM_039043468.1 Bhi09g02518 45135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02518 545 Pfam Polysaccharide lyase family 4, domain III 427 544 IPR029411 -
Bhi09g02518 545 Gene3D - 60 270 IPR014718 GO:0030246
Bhi09g02518 545 SUPERFAMILY Galactose-binding domain-like 424 543 IPR008979 -
Bhi09g02518 545 Pfam Rhamnogalacturonate lyase family 1 187 IPR010325 -
Bhi09g02518 545 SUPERFAMILY Starch-binding domain-like 317 415 IPR013784 GO:0030246
Bhi09g02518 545 Gene3D - 425 544 - -
Bhi09g02518 545 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 544 - -
Bhi09g02518 545 Gene3D - 315 414 - -
Bhi09g02518 545 PANTHER RHAMNOGALACTURONATE LYASE B-RELATED 1 544 - -
Bhi09g02518 545 CDD RGL4_M 318 417 IPR029413 -
Bhi09g02518 545 Pfam Polysaccharide lyase family 4, domain II 341 413 IPR029413 -
Bhi09g02518 545 CDD RGL4_N 1 278 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi04g01405 Bhi09g02518 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02518 Bhi-Chr9:68190288 Bhi09g02521 Bhi-Chr9:68191559 0 dispersed
Bhi09g02517 Bhi-Chr9:68184127 Bhi09g02518 Bhi-Chr9:68190288 0 tandem
Bhi09g02518 Bhi-Chr9:68190288 Bhi09g02519 Bhi-Chr9:68190299 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02518 K18195 - csv:101203789 1044.26