Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02521 GGAAAAGAAAAACAGAGAGAAAAAAGAGAGAATGATTTGCCTTTTGGTTCAAGTAAACAAAGCCGAGCTATAAAGATAAAACAAAGGTTCCCTTCTAAGTTGTCTGAAATTAAACTTTTTATTTATTTATTTATTTTTATTGTCTTTACGTAGGAAAATTTCGAAAAAAATTGAGGGAAATGAAAAACAGTAAAAAATTTCCGTCAAATTTATTTTGCCTTTTCTCTTCTTCTCTTCTCTTTTACTTTCACGCGCCCTTCATCTCTGCAACAACAACAACACAGCCTCCTCTTGAGGCTCTGCGCCAGTTTTCTTCTTCATTGTCGTCGATGAAACTTCTCGACGGCCGCCGCTGCCGACGGACGCGACCCCGACGCGGCGCCACCTCCTCCTGCGATTACGCATTCACGACCAACATGTTGTAATGGACAACGGCATAATCGGGGTCAACTTGTCGAATCCAAAGGGTATGGTCATTGGAATACAATACAAAGGGGTTGAAAACTTGCTTGAGGTTGGCAATGCCGAAGATGATAGAGGATATTGGGACATCGTTTGGAATCTGGCAGGAAGTTCAGGAACAAAGGGCATTTTCGATCGACTTGAAGCAACAGATTTCAAGGTAATTGTAGAAAATGATGAACAAATAGAACTCTCATTCAGCAGAACTTACAATTCATCCACCGGAGGCGATCTCATTCCCTTAAACATCGACAAAAGGTTCGTGATGCTTCGTAATTCATCAGGATTCTATTCGTACGCCATTTACGAACACTTGAAAGAATGGCCTGCGTTTATCATCGACAACACTAGAATCGTATTCAAGCCCCGAAAAGACAAGTTTCATTACATGGCTGTAGCAGATAAGAGACAGAGATTCATGCCTTTGCCCGACGATCGGAAGCCACCGCAAGGGGAAGCCCTAGCTTATCCGGAGGCCGTACTTCTTGTCGATCCTATAGAACCAGAGTTCAAGGGAGAGGTGGATGACAAGTACCAATACGGCTGCGAAAGCAAAGACGCTCGGGTTCACGGGTGGATATCCACCGACCCGCCCATTGGCTTTTGGCATATCGCACCCACCGAGGAGTTCCGCTCCGGTGGACCCCTCAAACAGTTTCTCACCTCCCATGTCGGTCCCACAACCCTTACTGTTTTTCATAGTGCTCATTACGCAGGAGAGGATATGGTTGTAAAGTTCGGATGTAATGAGCCATGGAAGAAGGTTTTCGGTCCTATCTTTATCCATCTTAATTCCTTTCCTGAAGGAGAGGATCCGCTTAGACTCTGGCAAAATGCTAAAGAACAGATGATGGCTGAAGTTCAAAGCTGGCCTTACGGTTTCCTTGCTTCTGAGGATTTTCCCAAATCCGATCAACGAGGCACCGTCAACGGCAGATTGATAATCCGGGAGAGATATGTGAGTGATGAATATGTGCCTGCAAGTGGTGCATATGTGGGGTTGGCACTTCCTGGAGAACTTGGCTCTTGGCAAACCGAAAGCAAGGGCTACCAATTCTGGACTAGAGCAGATCAGAATGGATCTTTCTCTTTGAATAATGTTCGCAGCGGAAATTATAGTCTCTATGGATGGGTCCCCAATTTTATTGGCAATTACCAATACAACGCTTTCATCGCCGTAACCCCAGGCAGTGATATCAATGTGGGAGAACTTGTTTTTGAGCCCCCAAGAGATGGTCCAACATTGTGGGAAATAGGCATTCCTGACCGTACTGCTGCAGAATTCTATGTGCCAGATCCTAATCCAAAGTATATTAATAAACTTTATGTCAATCATTCAGATAGGTTTAGGCAGTATGGATTATGGGAAAGATACACAGAGTTATATCCTGACGAGGATCTAGTTTATACAGTCGACCTTAGTGACTATAGAAAAGATTGGTTCTTTGCACAGGTTACCAGGAAGATAGAGGACAACAAATATGCTGGAACTACCTGGAAAATAAAGTTCCAACTTGACAGTCCAGATACACATGGAACATATAGGCTGCGTCTTGCATTGGCCACTGCACATGCTGCAGAATTACAAGTTCGACTGAATGATGCACAAGCACTTCCTCCATTATTCACAACTGGATTGATTGGAAAGGACAATACTATAGCTAGACATGGAATCCATGGTCTCTATCGTTTGTACACGGTTGACATTCCGGGTGGTGAGCTTGTGGTGGGCAACAATACAATTCTTCTTACGCAAGCAAGTAGCAACAGTCCTTTTGTAGGGATCATGTATGATTATATTCGTCTAGAAGGACCCTTAACATCCAAAATGTAAATAATTCAATTGAACTTGTTACAGATTCATTCAATAAAATTTTCATCATATCTGACCAAGGAA 2359 43.24 MDNGIIGVNLSNPKGMVIGIQYKGVENLLEVGNAEDDRGYWDIVWNLAGSSGTKGIFDRLEATDFKVIVENDEQIELSFSRTYNSSTGGDLIPLNIDKRFVMLRNSSGFYSYAIYEHLKEWPAFIIDNTRIVFKPRKDKFHYMAVADKRQRFMPLPDDRKPPQGEALAYPEAVLLVDPIEPEFKGEVDDKYQYGCESKDARVHGWISTDPPIGFWHIAPTEEFRSGGPLKQFLTSHVGPTTLTVFHSAHYAGEDMVVKFGCNEPWKKVFGPIFIHLNSFPEGEDPLRLWQNAKEQMMAEVQSWPYGFLASEDFPKSDQRGTVNGRLIIRERYVSDEYVPASGAYVGLALPGELGSWQTESKGYQFWTRADQNGSFSLNNVRSGNYSLYGWVPNFIGNYQYNAFIAVTPGSDINVGELVFEPPRDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNHSDRFRQYGLWERYTELYPDEDLVYTVDLSDYRKDWFFAQVTRKIEDNKYAGTTWKIKFQLDSPDTHGTYRLRLALATAHAAELQVRLNDAQALPPLFTTGLIGKDNTIARHGIHGLYRLYTVDIPGGELVVGNNTILLTQASSNSPFVGIMYDYIRLEGPLTSKM 623
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 68191559 68199342 - XM_039043467.1 Bhi09g02521 45138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02521 623 SUPERFAMILY Galactose-binding domain-like 424 616 IPR008979 -
Bhi09g02521 623 Gene3D - 61 270 IPR014718 GO:0030246
Bhi09g02521 623 Pfam Polysaccharide lyase family 4, domain II 341 413 IPR029413 -
Bhi09g02521 623 PANTHER RHAMNOGALACTURONATE LYASE B-RELATED 1 622 - -
Bhi09g02521 623 CDD RGL4_C 429 616 - -
Bhi09g02521 623 Pfam Polysaccharide lyase family 4, domain III 427 615 IPR029411 -
Bhi09g02521 623 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 622 - -
Bhi09g02521 623 SUPERFAMILY Starch-binding domain-like 317 415 IPR013784 GO:0030246
Bhi09g02521 623 Gene3D - 425 616 - -
Bhi09g02521 623 Gene3D - 315 414 - -
Bhi09g02521 623 CDD RGL4_M 318 417 IPR029413 -
Bhi09g02521 623 Pfam Rhamnogalacturonate lyase family 1 187 IPR010325 -
Bhi09g02521 623 CDD RGL4_N 1 278 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02518 Bhi-Chr9:68190288 Bhi09g02521 Bhi-Chr9:68191559 0 dispersed
Bhi09g02519 Bhi-Chr9:68190299 Bhi09g02521 Bhi-Chr9:68191559 0 dispersed
Bhi09g02521 Bhi-Chr9:68191559 Bhi09g02523 Bhi-Chr9:68203664 0 dispersed
Bhi09g02520 Bhi-Chr9:68190299 Bhi09g02521 Bhi-Chr9:68191559 0 tandem
Bhi09g02521 Bhi-Chr9:68191559 Bhi09g02522 Bhi-Chr9:68192017 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02521 K18195 - csv:101203789 1198.73