Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02523 CACCGTGCCAAGCTCCAACTATGCGCGCCGGTTCCGTGCAGCATTAAATTCCAACCTTCGCCGTCGAGCAAAAAATTTCGTAAGTGAAGGTTTGACAATGTCGTCCAGAGGCGTCCGATTGCAGATACGAGATCATCACGTGGTAGTGGAAAATGGAATACTGCAACTAACTTTATCAAAACCTGATGGAATTATCACTGGCATTCGGTATAATGGTGTTGACAATCTACTTGAAGTTCTTAACCCTGAATCTAACAGAGGGTACTGGGACCTTGTTTGGAATTCTCCAGGAAGCAAGGGAATATTTGACGTGATTAAAGGGTCAAGTTTTAGGGTTATAGTGGAAAATGAGGAACAGGTCGAGCTTTCTTTTATGAGGATGTGGGATCCCTCCCTTGAGGGCAAGCTTGTTCCTTTGAATATAGACAAAAGGTTTATAGTGCTACGCGGTTCCTCTGGATTCTACTCTTATGCTATTTATGAGCACTTGAAGGATTGGCCTGATTTTGATATTGGTGAAACCAGGATCACTTTTAAGCTTAGAAAAGACAAGTTTCAGTACATGGCTGTAGCTGACAATAGGCAGAAAGTCATGCCACTGCCCGATGATCGGTTATCTGGAAGATGCCAAACTTTGGCCTACCCGGAAGCTGTCTTGCTTACTAATCCCAAGAACCCTGAACTCAAGGGTGAGGTGGATGACAAATACCAATACTCGTGTGAAAACAAAGACTTAAAGGTTCATGGATGGATATGCACCAATCCACCCACCGGGTTTTGGCATATTACTCCCAGTGATGAATTTCGGTCAGGGGGGCCTCTTAAGCAAAGTCTAACATCACACGTGGGACCTACAACTCTTGCTATATTTCTTAGTGCTCATTATGCGGGACAAGATTTGGTGCCAAAATTTAGAGCTGGTGAGCCATGGAAGAAAGTTTTTGGCCCTGTTTTTTTCTATCTTAATTCCACCTCAGTTGGAGATGACCCATTTTGGTTATGGGAGGATGCTAAAATTCAGATGATGGCGGAAGTTGAAAGTTGGCCGTATAGTTTCCCTGCATCTGAGGATTTCCCGAAAGTAGATCAACGGGGTGTTGTTCGAGGTAGGCTACTGGTTCTTGACAGGTATGTGAGTCAAGACTATCTTCCAGCCAGCGGAGCCTTCGTTGGAATCTCTGCACCAGGAGAAGTGGGGTCATGGCAGAGAGAATGCAAGGGATATCAATTCTGGACTAGAGCAGATGATGGTGGTTATTTTACCATCAACCACGCACACACTGGCGACTATAATCTATATTCATGGGTCCCTGGCTTCATTGGAGATTACCGTTGCGATGCCCTCATCAACGTGAACCAAGGATCTTGCATTGAAATGGGCGATCTTGTATATGAACCTCCAAGAGATGGGCCTACACTATGGGAAATTGGCATTCCCGATCGCTCTGCATCTGAGTTCTATGTTCCTGATCCTAATCCAACACATATTAATAAGCTCTTTGTCAATCATCCTGACAGGTTCCGGCAGTACGGGTTGTGGGACAGGTATGCCGAATTATACCCGAACGAGGATTTAGTGTACACAGTTGGCACAAGTGACTATAGCAAAGATTGGTTCTTTGCTCAGGTCCCTAGGAAGACAAAAAGTAATTCACATGAAGGAACTACTTGGCAAATCAAATTCTATCTTAATAGAGTGGCTCGCAAGAGTATGTATACACTACGAGTTGCAATTGCATCTGCTACTCTTGCTGAATTGCAGGTTCGGGTAAATGATCCGAGATCAAAGCGACCTTTGTTTACGAGCGGATTGATAGGGAGAGACAATTCAATTGCAAGACATGGAATTCATGGAATTTATTGGCTTTACAGCGTGGGCGTAGGAGGCTGTCATCTTGTTGAAGGAGAAAACACAATCTTCTTGACTCAGCCACGCTGCACCAGCCCTTTCCAGGGTATCATGTATGATTATATCCGTCTGGAAGGCCCTCCAACAAATTGATTAATCCTCAACTATTTTTCATATTGCACTTCTTTTTCCTCAAGTTAAATTCCATATTGCGTATTGCTTATCTATCTTCAATATTTATGTGTATGAAGTTATTTTTGGGTATGTCTCCTGGCTTGTATGGGAGATTGTTTCTCAACCCCTCTGTCGTTTTTAGTTTTTCTATTTTTAAAATTTATGCCCATTTACTCCTAAA 2204 43.28 MSSRGVRLQIRDHHVVVENGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRGYWDLVWNSPGSKGIFDVIKGSSFRVIVENEEQVELSFMRMWDPSLEGKLVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQKVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGEVDDKYQYSCENKDLKVHGWICTNPPTGFWHITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFFYLNSTSVGDDPFWLWEDAKIQMMAEVESWPYSFPASEDFPKVDQRGVVRGRLLVLDRYVSQDYLPASGAFVGISAPGEVGSWQRECKGYQFWTRADDGGYFTINHAHTGDYNLYSWVPGFIGDYRCDALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPTHINKLFVNHPDRFRQYGLWDRYAELYPNEDLVYTVGTSDYSKDWFFAQVPRKTKSNSHEGTTWQIKFYLNRVARKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGIHGIYWLYSVGVGGCHLVEGENTIFLTQPRCTSPFQGIMYDYIRLEGPPTN 634
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 68203664 68220645 - XM_039041994.1 Bhi09g02523 45140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02523 634 CDD RGL4_M 331 430 IPR029413 -
Bhi09g02523 634 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 633 - -
Bhi09g02523 634 CDD RGL4_N 14 293 - -
Bhi09g02523 634 Pfam Polysaccharide lyase family 4, domain III 440 628 IPR029411 -
Bhi09g02523 634 SUPERFAMILY Galactose mutarotase-like 12 296 IPR011013 GO:0003824|GO:0005975|GO:0030246
Bhi09g02523 634 Gene3D - 438 629 - -
Bhi09g02523 634 CDD RGL4_C 442 629 - -
Bhi09g02523 634 SUPERFAMILY Starch-binding domain-like 331 423 IPR013784 GO:0030246
Bhi09g02523 634 Pfam Rhamnogalacturonate lyase family 10 200 IPR010325 -
Bhi09g02523 634 Pfam Polysaccharide lyase family 4, domain II 354 425 IPR029413 -
Bhi09g02523 634 Gene3D - 7 304 IPR014718 GO:0030246
Bhi09g02523 634 SUPERFAMILY Galactose-binding domain-like 437 629 IPR008979 -
Bhi09g02523 634 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 633 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01405 Bhi-Chr4:35586119 Bhi09g02523 Bhi-Chr9:68203664 0 dispersed
Bhi04g01406 Bhi-Chr4:35586123 Bhi09g02523 Bhi-Chr9:68203664 0 dispersed
Bhi09g02517 Bhi-Chr9:68184127 Bhi09g02523 Bhi-Chr9:68203664 0 dispersed
Bhi09g02521 Bhi-Chr9:68191559 Bhi09g02523 Bhi-Chr9:68203664 0 dispersed
Bhi09g02523 Bhi-Chr9:68203664 Bhi11g00875 Bhi-Chr11:26891371 0 dispersed
Bhi09g02522 Bhi-Chr9:68192017 Bhi09g02523 Bhi-Chr9:68203664 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02523 K18195 - csv:101203947 1254.2