Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02526 TATGTTAAAATATCGTGATCTGGTTGGGCCACGTGTCCTCGTAATTATGTGGTCTTTCCACACTGGAAAAAAACCCAGAGAGGCTTCAATACATGGACGCAGCAGATCCCTTTCCATAAATGGCGCTGTGCAGCTGAATGATGTGAATCCGCTTCAGTACAACGCTCCGTAAAAAAGCGCTAATTCTGTTTGATCTCACTTTGCCTGACTCCAACCAGCACCGCACTCATCCGCAAAGAAAGAATCGAGTTGCGGATCTAAGTATGGGGAGAGGCAAGATTGTAATTAGGAGAATCGATAATTCGACGAGCAGACAGGTGACTTTCTCGAAGCGTAGGAGCGGATTGCTGAAGAAGGCGAAAGAACTAGCAATTCTTTGCGACGCCGATGTTGGAGTCATCATCTTCTCCAGCACGAGCAAGCTCTATGAATACTCCAGCACCAGCATGAAAACACTAATAGAACGATATAACAAAACAAAAGATGAGCACCATCAGCTTGGGATCTCGACTTCTGAAGTCAAGTACTGGCAAAGGGAAGCAGCAACATTACGGCAGCAACTGCAGAGCTTACATGAAAATCACCGGCAGATGATGGGTGAAGAGCTGACTGGTCTGAGCGTCAAAGACCTACAGAATCTAGAAAATCAATTGGAGATAAGTCTCCATGGTGTCCGTATGAAGAAGGGAAACTTTATTCACCAAAACAATATGGAACTTTATGAGAAGGTAACCCTAATTCGTCAAGAAAACCAGGAATTACACAAAAAGGTTTATGGAACGAAGGATGCCAATGGAGCACACATAAGCAGTCTTACAAATGGACTTGGTGTTGGAGAGGATGCAGGCATACCTATCAACCTTCAACTCAGCCAGCCACAGCAACAAGACAATGAGGCACCAGAAAGAGCTACAAAATTGGGCAGACTACAACTACGCTAGCAAAAAGAGACCTTACACCAACCAGGAAGATATTTCTTATTTTGCATCAAGATAACGGTGTAAGGTTGCAAATTATCTTTCAATCAGTGAAATGTGGTAGAGTAACACACTTTTCCATACCGAAAGAAACCACCTTTGTCTAGTTTGTGGTGATTTAAACAAGGCTATTTATGTGACAAGAAGGCTATGCAAAAAACAAAAAATAATTAAAA 1153 42.67 MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSSTSMKTLIERYNKTKDEHHQLGISTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSVKDLQNLENQLEISLHGVRMKKGNFIHQNNMELYEKVTLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAGIPINLQLSQPQQQDNEAPERATKLGRLQLR 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 68307204 68326611 + XM_039043046.1 Bhi09g02526 45143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02526 225 Pfam K-box region 83 170 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bhi09g02526 225 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Bhi09g02526 225 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bhi09g02526 225 CDD MADS_MEF2_like 2 78 IPR033896 GO:0000977|GO:0045944
Bhi09g02526 225 PANTHER MADS-BOX TRANSCRIPTION FACTOR 23 ISOFORM X1 1 223 - -
Bhi09g02526 225 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 223 - -
Bhi09g02526 225 Coils Coil 86 113 - -
Bhi09g02526 225 Gene3D - 13 93 IPR036879 GO:0003677|GO:0046983
Bhi09g02526 225 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bhi09g02526 225 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bhi09g02526 225 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bhi09g02526 225 MobiDBLite consensus disorder prediction 204 225 - -
Bhi09g02526 225 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bhi09g02526 225 ProSiteProfiles K-box domain profile. 86 176 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bhi09g02526 225 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bhi09g02526 225 SUPERFAMILY SRF-like 2 90 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02526 Bhi-Chr9:68307204 Bhi09g02528 Bhi-Chr9:68307217 1.72E-161 dispersed
Bhi11g01356 Bhi-Chr11:39870488 Bhi09g02526 Bhi-Chr9:68307204 4.83E-41 dispersed
Bhi09g02526 Bhi-Chr9:68307204 Bhi09g02527 Bhi-Chr9:68307216 3.67E-164 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1961 PF01486 K-box 3.20E-22 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02526 K09264 - csv:101203545 407.912