Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02572 CTATTTGAGCACGCGGTAGATTGCCATTTGCATTCTCTCGAGAAACAAAAGAAAGAAAGAAACAGAGAGACCATCCCATAATTTTATCATACAAGTCCGGATTGTGAGACTGCCAAACCAATTTTTACAAACACAAACAGAGAAGCGCAGCAAAATCAACAGAGGATTCCATGACAATTGATCATTTGTAGCTTCTCTCTATTCTGTTGCTGTCCGCTACTTCAGGATTTCTTTCCCTTTACCCTTTTTATATATCCCTTCTTTCTCTTCTCTAAACCTTTTACTTATACTTCCTTATTCATTTCACAAATCAAATTCCCCAACATTTCTGTCTGCTTCATCTTCGACCATTTGGGGGATTTTTGGACCAGTATGGCCAATATGTGTCTTATATGACTTGGTGTGTGGAAGGGGGGGAAGGGAAGTTACAGAGGAGTCGTATCTGATTTATCGTAACTCTGCTTCCATTCAAAAGGCTCGTCTTCGCTTTCTGTGGGGATGATGGCTGTTACTTCCGCCTGCAAGGACGCTGCTAGCAAGATGAGCAGCTTGGATAATGGGAAGTACGTTAGGTACACACCAGAGCAAGTGGAAGCCCTTGAGAGGCTTTATTATGAATGCCCAAAACCCAGTTCTATGCGCCGCCAGCAGCTTATAAGGGAGTGCCCAATTCTCTCCAATATCGAACCCAAGCAGATCAAAGTTTGGTTCCAAAATCGGAGATGTAGAGAGAAGCAGAGAAAGGAGGCATCACGCCTTCAGACTGTGAACAGGAAGCTTACGGCTATGAACAGACTCCTAATGGAGGAAAATGATAGGTTGCAGAAACAGGTGTCACAGCTTGTGTATGAGAACAGCTATTTTCGTCAACAAACCCAGAATGCGACCTTAGCCACCACTGACACAAGTTGCGAGTCAGTGGTGACAAGTGGTCAACAGAATTTGACTCCGCCGCATCCACCAAAGGATGCCAGTCCCGCAGGACTTTTGTCCATTGCGGAGGAGACTTTAGCAGAGTTTCTTTCAAAGGCTACTGGAACTGCTGTGGAGTGGGTCCAAATTCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGATGCACTGGAGTTGCTGCTCGTGCATGTGGTCTTGTGGGTCTCGAACCTACAAGAGTGGCTGAAATTCTTAAAGATTGGCCTTCTTGGTTTCGGGATTGCCGTGCCGTTGATGTTCTAAACGTCCTATCTACTGGAAATGGAGGAACGATTGAGCTTCTATACATGCAGCTCTATGCACCTACTACTTTGGCACCTGCTCGTGATTTCTGGCTGCTGCGATACACATCTGTTTTGGAGGATGGTAGTCTTGTGGTCTGTGAAAGATCTCTTAACAATACTCAGAATGGTCCAAGTATGCCTCCAGTCCAACACTTTGTAAGAGCAGAAATGCTACCAAGTGGGTATTTGATAAGACCTTGTGAAGGTGGTGGATCAATAATCCATATAGTTGATCACATGGACTTAGAACCTTGGAGCGTGCCTGAAGTGTTGCGGCCATTATACAAGTCCTCTACGCTGCTTGCTCAGAAGAACACAATGGCGGCATTACGCTTGTTGAGACAGATTTCACAAGAAGTTTCTCAACCAAGTGTTACTGGTTGGGGAAGAAGACCTGCCGCACTTCGTGCTCTTAGTCAGAAATTGAGCAGAGGTTTCAACGAAGCAGTTAATGGGTTTACAGACGAGGGATGGTCTTTGTTAGAAAATGATGGCATTGATGATGTTACACTTCTCGTAAACATGTCTCATGGCAAGACAATGATGGGTGCAAATATTTCATATTCTAATGGCTTTCCATCCATGAGCAACGCAGTGCTTTGTGCCAAAGCATCGATGTTACTACAGAATGTTACTCCAGCAATGCTCATCAGGTTCTTGAGAGAACACCGGTCGGAATGGGCAGACAGCAGTATTGATGCTTACTCAGCAGCAGCAATTAAGACCGGTCAGTGTGGCTTACCAGGGTCTCATGCTGGAACTTTTGGGGGTCAGGTTATTCTTCCCTTGGCACAAACAGTTGAGCATGAAGAGTTTATGGAAGTTGTTAAATTTGAAAACATGGGCCACTATAGGGATGATATGCTCATGCCTGGTGACATCTTCCTCCTCCAACTTTGCAATGGTGTGGACGAGAATGCAGTTGGTACTTCTGCTGAACTCATCTTTGCTCCGATTGACGCCTCTTTTTCTGATGATGCACCTATTCTACCATCCGGCTTCCGTATCATTCCGCTTGATTCTGGGATGGATGCTTCAAGTCCAAACCGCACGCTTGATCTTGCTTCGGCTCTTGATGTTGGGCCGGCAGGAAATAGAGCCTCTGGTGATTGTGCTGGTCAATCAGGAAAATCAAAATCTGTGATGACAATTGCATTCCAATTTGTATTTGATGTTCACCTTCAAGATAATGTAGCAGCAATGGCACGGCAGTATGTCAGGAGCATTATAGCATCTGTTCAGAGGGTGGCACTGGCTCTTTCCCCTTCGAATTTCGGTCCTCATGCTAACCTTCAGACACCAGCTGGTGCTCCCGAAGCACAAACACTTGCTCGTTGGATCTCTCAAAGCTATAGGTGTTATATGGGCATGGAATTACTGAAAAATGAAGGAAGAGAATCCATTCTCAAATCCCTTTGGCATCACTCAGATGCGGTCATGTGCTGCTCTTTGAAGGCATTGCCAAATTTTACATTTGCTAATCAATCTGGACTTGACATGCTTGAGACAACCTTGGTGGCTCTCCAAGACATTACTCTGGAGAAGATTTTTGATGACAATGGAAAGAAAACTTTAGCCTCAGAGTTCCCGCGGATAATGCAGCAGGGCTTCCTTTGTCTTCAAGGGGGTGTCTGCTTATCAAGCATGGGAAGGGCAGTATCCTATGAGAAAGCTGTGGCATGGAAAGTTTTGAATGAAGAAGAAAATGCTCACTGTATTTGCTTCATGTTTATGAACTGGTCTTTTGTTTGAAACGCTTAGTCAGAAAGTAGGAACATGACAATTAGACTAGATCAAATTTTCCTTTAACTTAGATTTCAGAAGCAATGAAAATAACCCAAGAACTAAATGAGCAAAGCATATTGCCCCTAATGTCTCTTTCTCCCACTTTGTTGCTTACCCTTTGTGAAATTAGTTATGGAATCGTCTTGTCCATATATTTTTTCTTATAATTAATATTAAGGCAACAAATCTCACGATGA 3257 44.09 MMAVTSACKDAASKMSSLDNGKYVRYTPEQVEALERLYYECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNRLLMEENDRLQKQVSQLVYENSYFRQQTQNATLATTDTSCESVVTSGQQNLTPPHPPKDASPAGLLSIAEETLAEFLSKATGTAVEWVQIPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDWPSWFRDCRAVDVLNVLSTGNGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYKSSTLLAQKNTMAALRLLRQISQEVSQPSVTGWGRRPAALRALSQKLSRGFNEAVNGFTDEGWSLLENDGIDDVTLLVNMSHGKTMMGANISYSNGFPSMSNAVLCAKASMLLQNVTPAMLIRFLREHRSEWADSSIDAYSAAAIKTGQCGLPGSHAGTFGGQVILPLAQTVEHEEFMEVVKFENMGHYRDDMLMPGDIFLLQLCNGVDENAVGTSAELIFAPIDASFSDDAPILPSGFRIIPLDSGMDASSPNRTLDLASALDVGPAGNRASGDCAGQSGKSKSVMTIAFQFVFDVHLQDNVAAMARQYVRSIIASVQRVALALSPSNFGPHANLQTPAGAPEAQTLARWISQSYRCYMGMELLKNEGRESILKSLWHHSDAVMCCSLKALPNFTFANQSGLDMLETTLVALQDITLEKIFDDNGKKTLASEFPRIMQQGFLCLQGGVCLSSMGRAVSYEKAVAWKVLNEEENAHCICFMFMNWSFV 842
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 69867104 69874969 - XM_039043445.1 Bhi09g02572 45189
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02572 842 CDD START_ArGLABRA2_like 160 375 - -
Bhi09g02572 842 CDD homeodomain 22 82 IPR001356 GO:0003677
Bhi09g02572 842 Pfam MEKHLA domain 701 841 IPR013978 -
Bhi09g02572 842 SUPERFAMILY Bet v1-like 165 375 - -
Bhi09g02572 842 Gene3D - 14 88 - -
Bhi09g02572 842 ProSiteProfiles START domain profile. 156 370 IPR002913 GO:0008289
Bhi09g02572 842 ProSiteProfiles 'Homeobox' domain profile. 17 81 IPR001356 GO:0003677
Bhi09g02572 842 PANTHER CLASS III HD-ZIP PROTEIN CNA1 6 842 - -
Bhi09g02572 842 Coils Coil 91 118 - -
Bhi09g02572 842 CDD bZIP 74 113 - -
Bhi09g02572 842 Pfam START domain 166 374 IPR002913 GO:0008289
Bhi09g02572 842 SMART HOX_1 19 85 IPR001356 GO:0003677
Bhi09g02572 842 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 6 842 IPR044830 GO:0003700
Bhi09g02572 842 SUPERFAMILY Homeodomain-like 21 84 IPR009057 -
Bhi09g02572 842 SMART START_1 165 375 IPR002913 GO:0008289
Bhi09g02572 842 Gene3D - 200 376 IPR023393 -
Bhi09g02572 842 Pfam Homeodomain 22 80 IPR001356 GO:0003677
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g00453 Bhi-Chr9:9698927 Bhi09g02572 Bhi-Chr9:69867104 0 dispersed
Bhi09g00454 Bhi-Chr9:9698927 Bhi09g02572 Bhi-Chr9:69867104 0 dispersed
Bhi09g02572 Bhi-Chr9:69867104 Bhi10g00546 Bhi-Chr10:11992890 0 dispersed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1966 PF01852 START 1.40E-53 CL0209 Bhi TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02572 K09338 - csv:101218438 1666.74