Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02625 GTGATTTTAGAGCTTTGGAGGCTTATAAAATGGGGGAAGCTCGTGGGGAATAGGCATTGTAGGCGGAGAGACAGCGAGACTTCAGAATAAGCTAAAAAAACTAAAAGCAATAGTGTGTGAGAAAAAAATCAGTTTGAAGTTTCTTCTTCTTCATCTTCTTCTTCTTCCCCCCTTCTGCAACTCCCCGCTTCTCTGTATCCCTTTCTGTTAATTATCTGTCTTTCAGGTTCTGGTTTTTGGGTTTGTTTTTCGGGAATGAACAATAACCAAACTTAGGATTGTGCAAAGCCAGGTATTTTCAGAATCGAGATCCAGGATTTGTGTCTTACTTTTCATTTTTCTATAGTTTAATTCCTTTGGTTTTGTTTTTTATTGCTTTCTTTTTCGTTCTTTTTCTTCTAATGATCAATCCGCATGGAGGGTGAATTTTAGTCCCTCAAGGTTTGGTTTTCTTTTCTTCTTTCTGTTTTTTTCTTTTTTTTGAAGTTGAAGGGGTTGTCTATTTTCAGACCTCTTTGATATTTTTAATTGTGGCCTGTTCTTTCTATTTTAACAAGAACCAGGTTCATCTGTAGGGAAATACATTTTTTTTTTTTTTTTTTTTTTCCATTTTGGTTTTGGGTTCTTTCATTTTGGCGAACCATCGAAAGTAATGGCAGCTGCCATGGATTTCTACAATGAAGGACCACAGACAGACCACTTCGGTGGTGAACTAATGGAAGCAATTGTACCTTTTATTAAAGTTGCTTCCTCTTCTGCTTCCTCTCTCTCTACAAATTTCTCTTCTTCTTCTTCACCAACAGCGTATCTCCCTCCTTATTCTTCTTCCTTCGACACCCACCACCTCAACTTCTCTCACTCAGCCCCTCAACAGTCCACTTTGTACTCAAATGGCTGCTCCACTTCGATGAACCCAGTATTTTCAGATGGGTTCTCGACACAAAACCACATTGGTTTCGAACAGCCATTCACAATTGGACCCCATCAGTTATCATCAACTCAAATCCCCCATTCCCAACCTCAAATCAATCTTCTTCAAAACCAAACCCCACTAGCCTTTGCTTGGGGGCAACAAAACCATCAACCACCATCCTGCTATGAAGAACAAACGCGCAGCTTCCTCACCCCCAAGCCCATCCCAATGAAGCAAGTGGGTTCGTCTTCAAAACCCACTAAGCTTTACAGAGGTGTCAGGCAACGGCATTGGGGAAAATGGGTGGCCGAGATCCGACTCCCAAGGAACCGAACTCGGCTCTGGCTCGGTACCTTTGACACTGCTGAAGAAGCTGCCTTGGCATATGACAAAGCAGCCTTCAAGCTTCGAGGGGACTCTGCCAGACTTAATTTCCCCAACCTCAAGCACCAAGGCTCCTGTGTTGAAGGCGAATTCGGCGAGTACAGGCCTCTACATTCCTCAGTAGCTGCAAAGCTCCAAGTAATTTGTGATAACTTGGCCAAGCCGCAGAAACAAGGCAACTCAAAGAGGCCTGTTAGTGCAGCTAAGAAGTCAAGGTCCCAATCCTGCTCCATGGCCGCGGAAACAGTAGCTGTGAAGGTGGAGAACTCCTCGTCAAGGGCTGTCACAGAGAGCGACGGGTCTGAAGCGTCTTCACCTCTATCAGATCTTACATTTCCTGACTTCACAGAGTTGCCATGGGATCAGAATCAAGCTCGGGAGAATTCAATGCTAGAAAAATATCCTTCTGAGATCGATTGGGCATCGATCTTACCTTAATAATTTGATCGGAATCTTCAAGGGCATCTGCAACAGAGTTTTATTGAAGGTTGCAGGCCGAGGCTCAAGGCTCATATTCTTTTAAATGGGCATTGTGTCAATATCATGTAAATGTCCATGGTCAGCTGGTTTTTTTCTTGCTAGACCGTGAATGATTTAATTTTGGTATTCTTTTTTCTCTTCAGTTGTAGTAACTGTATTCATTTTTTTATTGGTATGTTATATTGTCTAAAATTTGCAGTTAAA 1981 42.35 MAAAMDFYNEGPQTDHFGGELMEAIVPFIKVASSSASSLSTNFSSSSSPTAYLPPYSSSFDTHHLNFSHSAPQQSTLYSNGCSTSMNPVFSDGFSTQNHIGFEQPFTIGPHQLSSTQIPHSQPQINLLQNQTPLAFAWGQQNHQPPSCYEEQTRSFLTPKPIPMKQVGSSSKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAFKLRGDSARLNFPNLKHQGSCVEGEFGEYRPLHSSVAAKLQVICDNLAKPQKQGNSKRPVSAAKKSRSQSCSMAAETVAVKVENSSSRAVTESDGSEASSPLSDLTFPDFTELPWDQNQARENSMLEKYPSEIDWASILP 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 70833421 70835401 + XM_039043919.1 Bhi09g02625 45242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02625 360 PRINTS Ethylene responsive element binding protein signature 177 188 IPR001471 GO:0003700|GO:0006355
Bhi09g02625 360 PRINTS Ethylene responsive element binding protein signature 199 215 IPR001471 GO:0003700|GO:0006355
Bhi09g02625 360 SMART rav1_2 176 239 IPR001471 GO:0003700|GO:0006355
Bhi09g02625 360 CDD AP2 175 235 IPR001471 GO:0003700|GO:0006355
Bhi09g02625 360 SUPERFAMILY DNA-binding domain 176 233 IPR016177 GO:0003677
Bhi09g02625 360 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 358 - -
Bhi09g02625 360 MobiDBLite consensus disorder prediction 270 289 - -
Bhi09g02625 360 MobiDBLite consensus disorder prediction 302 347 - -
Bhi09g02625 360 Pfam AP2 domain 177 225 IPR001471 GO:0003700|GO:0006355
Bhi09g02625 360 Gene3D AP2/ERF domain 176 234 IPR036955 GO:0003700|GO:0006355
Bhi09g02625 360 ProSiteProfiles AP2/ERF domain profile. 176 233 IPR001471 GO:0003700|GO:0006355
Bhi09g02625 360 MobiDBLite consensus disorder prediction 302 345 - -
Bhi09g02625 360 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-4 1 358 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01206 Bhi-Chr3:25006490 Bhi09g02625 Bhi-Chr9:70833421 2.23E-83 dispersed
Bhi05g01853 Bhi-Chr5:58150471 Bhi09g02625 Bhi-Chr9:70833421 6.47E-33 dispersed
Bhi09g02625 Bhi-Chr9:70833421 Bhi10g01151 Bhi-Chr10:24175453 6.15E-33 dispersed
Bhi09g02625 Bhi-Chr9:70833421 Bhi04g00746 Bhi-Chr4:18265145 5.81E-104 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1969 PF00847 AP2 2.70E-15 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02625 K09286 - csv:101214560 624.009