Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02687 GTATTAAAAAACAAAGAAAAAAAAGTAATCGATTTCCACTCTCCCAATTCTTCTCGAGAAAAAAAAAATCCATTCCCCACTCTTTGGGAGGCGTATGGAAGGCTACGATTAAATTAGATGCCACATGATCAGAATCTGAATGTCAATAGTGGCCCAATCTTAAATCCCCATTCTTTGCAAGTCGGTGTTTGTAATGAAAAATGGAATGAAGGGGGAAATTCAGTTGAACCCTCGAACGACTGTTCCGATTTCTCTATTTGTTGTTCTTTCATAATTTTCCCGAGAAATTTTAGCAGTTGACCCGAATCATCTCCAGAGGGAGTATCCGTACACTCATGGCTTCAGATTATGCGTTGAAGGTTCCTGCTGAACTTGAATCAGCTTTGCGGTTGAAGACTGTTCAGTATTTCATTACAAAAAGGCCGTGGCTTGATCTCTATGGGGTTAATGTTAGACCTGTTGCGCCATTTGGAAGTTCGAGTCGGCAGCCATTTATTGATCCAGCATTAATACATCGCTCCTTGCCAGATGAGTTATTGTTTGAGGTCTTTGCCAGAATGACTCCTTATGACCTGGGACGGGCATCGTGTGTCTGCCGAAAATGGAGATATACTATTCGTAATCCTGTATTCTGGCGTAGTGCTTGTTTGAAGGCTTGGCAGCTATCTAGTGTGGTTGAAAACTACAAGTTTTTGCAGTCTATGTATGATGGATCCTGGAGAAAAATGTGGCTTTTGCGGCCAAGGATCCGCACTGATGGTCTTTATGTTAGCAGGAATACTTATATACGTGCTGGGATTGCAGAGTGGAAGATTACCAATCCAGTTCACCTGGTGTGCTATTTCCGTTACATCAGATTTTTTCCTTCTGGGCGCTTTCTCTACAAGAATTCTTCACAGAAGATTAAGGATGTGGCCAAGTGCATGAATTTTCGTGCATCAAAAGCCGACTGTATTTTTGGTGGACACTATACCTTGTCAGATGATAAGGTTGAAGCAGCTGTTTTGTACCCAGGTGCACGTCCTACTGTGCTCAGAATCCGCATGAGGTTAAGAGGAACATCAACGGGGGCTAACAACCGAATGGATCTACTGACCCTTGTTACCAGCGGTATGAATAACAATGAGGTCGGTGATCCTGAAGATGATATCCTTGGCATTGTGGAAAGGTGGCGAGACGATGAAACACACAACCCGGACGTGCCTGCAGTTTCTCATAAGCGGGGCATGACACCTTTTATTTTTGTTCCTTTTGATCAGGTGGAAACATCAGAACTAAACTTGCCTATAGATAAGATGGACTATTTTGTACCCGGTTGATGCACCAAGATTAATGTATCTTTCTGTATATATTCTTCAGTCCGGCCTCTTGAGTTTTTTTTTCTTCGTCACTTTATGTGCTGCTTGATGCCTGTGTATAAATAACGTAGCATGTGAATTTGTCCGAAGACGTCAATTTCTTCTGTGTTTCCACTTGTTCTTATTGTATCATCCCAGTATTGTATGATTGTATTGCAAAAAGTTCCAAAGTGATGCTTATTTATAAATTTTGATGCAACCTGGGAAATTGAAGAATGTGAAGTTAGAATGTTTGA 1594 41.41 MASDYALKVPAELESALRLKTVQYFITKRPWLDLYGVNVRPVAPFGSSSRQPFIDPALIHRSLPDELLFEVFARMTPYDLGRASCVCRKWRYTIRNPVFWRSACLKAWQLSSVVENYKFLQSMYDGSWRKMWLLRPRIRTDGLYVSRNTYIRAGIAEWKITNPVHLVCYFRYIRFFPSGRFLYKNSSQKIKDVAKCMNFRASKADCIFGGHYTLSDDKVEAAVLYPGARPTVLRIRMRLRGTSTGANNRMDLLTLVTSGMNNNEVGDPEDDILGIVERWRDDETHNPDVPAVSHKRGMTPFIFVPFDQVETSELNLPIDKMDYFVPG 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 72176927 72185875 - XM_039042952.1 Bhi09g02687 45304

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02687 327 ProSiteProfiles F-box domain profile. 57 103 IPR001810 GO:0005515
Bhi09g02687 327 PANTHER F-BOX ONLY PROTEIN 48-RELATED 2 311 IPR045118 GO:0019005|GO:0031146
Bhi09g02687 327 Pfam F-box-like 61 106 IPR001810 GO:0005515
Bhi09g02687 327 Pfam F-box only protein C-terminal region 118 327 IPR045464 -
Bhi09g02687 327 PANTHER F-BOX ONLY PROTEIN 9 2 311 - -
Bhi09g02687 327 Gene3D - 51 141 - -
Bhi09g02687 327 SMART fbox_2 63 103 IPR001810 GO:0005515
Bhi09g02687 327 SUPERFAMILY F-box domain 61 139 IPR036047 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02687 K10295 FBXO9; F-box protein 9 - csv:101219089 664.455
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02686 Bhi-Chr9:72176927 Bhi09g02687 Bhi-Chr9:72176927 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g255 . . . . . . . . . . . Cma09g00791 . . . Cpe06g00624 . . . . . . . . . . . . . . . Cone4ag1413 Cone7ag1525 . . Lsi04g02394 Csa04g01794 . . . . . Bda01g01441 Bpe02g01645 . . . . . Cmo09g00783 . . . Car09g00704 . . Bhi09g02687 . . . . . . Cla11g01539 Cam11g1600 Cec11g1629 Cco11g1630 Clacu11g1757 Cmu11g1573 Cre11g1991 . . Chy07g00633 Cme07g00847
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013943 1 2 0 0 1 0 1 0 0 1 0 0 1 1 1 1 0 2 1 0 1 1 1 1 1 0 1 2 1 1 23