Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02713 ACAAAACCCTTCCCGCCATTTTCACTCTCACTCGTTCCCTCGTCTGATTTCCCACGGAATCCTCTCGCTCGTCGGAGCTCGTCGAGAAAGGTGGTAGACGAAGCAACGGCCGAGATGCTGAAGCCGAAGCCATTCGCCGGAGCTAATGTGTTTGTCTCCCGCAATCTTGTCGCTCCGGAGATGTTCGACGCTCTTCACGACGCTCTCAAGCAGAATGGGGCTGAGGTTTTCCTTTGTTGCGATCCCTCTCGAAACGGCCCTAATGATTATCATGTTATCTCCTCCCCCGATCATGAAAAGTTCGAGGATCTTCGTGCGAAGGGATGCAATTTGCTAGGTCCTCAGTGCGTGATGTCATGTGCAAAAGAGCACAGACCCCTTCCTCAACAGGGTTTTACTTGCTGCCTTGCAATGGATGGTGTGAAAATTCTAGCATCCGGATTTCAGGAAGATGAAAAGGTTGAGATAGGGAAGTTAGTTAATGCAATGGGAGGAGTATTGCATATGAAAGCATCACTAGATGTCAGCTTTGTTATTGCGAAGAATGCATTGGCTGCTAAATACAAGTGGGCACTAAACATTTCAAAGAAACCAATTGTGACATTTGCTTGGTTACAACAATGCTGGATTGAACATCGTGTAGTGCCTCAGGAGGGATATCGAGTCCTTCCATTTTCTGGATTGAATATATCGGTATCTAGGATTCCTGCAGGTGAGCGCAAGGAGATTGAAAAGCTTATCTTGCAAAATGGTGGAAGATATTCTGCCGATCTTACAAGAAAGTGCACACATTTGATATGTGATGCTCCTGAAGGTGACAAGTACAAGGTTGCACGGACATGGGGCCGTATCAATATTGTTACTCGGAAATGGTTTGATCAGTCCATAGCTAGAAAAGCATGTCTTAATGAGGAGTTGTACCCTGTTGGTAGCGTTTCTGGAACTTCGAATAAAATGACAAGGGGTTGTTTGACTGCTCACAATAGCCAAGAGAAGATTACTGGGAACTTGCAAGCTGTACCATCCTCATTTATTGCTGATTCAAATTTCTCAGCAGTTTCTGGTCCTGGGTTTTCAGATATGGATTTTGAAGCTACTCTTTCACAGAGCACATCTATGTTTTCAGATGCTTCTCATTTTATAAATGAGGTTGATGTTGAAGTGCCAGTTGTGATGGGAAAGAACGAAGAAAACACTGATAATTGTATTGCAAATGACTTTCAGTCTGAAAACGACCTATATTTGTCAGCATGTAGAATAAAAGTTGTTGGGTTTGAAGCTTCTGAGATGCGGAAGATTGTGAATATGATTCTCAGAGGTGGAGGCTCCCGATACATGTTGTTCAATGACAAATTAACACACATAATAGTTGGAAATCCCTCGGAAATGGAGAAAAAGGAGGTCAGAGATATTGCAGCTTCAGGAGTCATTCATGTTGTTAGAGCCAACTGGCTTGAAGATTGTGATCGTCAGAAGAAGGAGATCCCTATTCTTGGTAGACACATGGCATATGATGAACTTATTCCTAAAGCATCCAGTAAAACGAGCACCATCGTTATGGATCCAAATAAAGTTCCGAATGTTCATCCAAGCGTGCCATCAAATGTGTTAGAAGGAAATGTTCATGTTAGAATTGGAAAGACATCGACGACAGAGGAAAAAATTGAAGAAAAAATTGAAACAAACGTGAGTGGTGACAGGACCATGAAATTATCCCAGAAAAGCCACCAATGCGTAGCAAATGGTACAAACAAGAGTCAAGAAAAGATGTGGCGTGATTTCATGGTTCCAAGTGGGAAGTCATCATGTGTGTTTAAGGGGAAAATATTTTGTTTTTCTAGTTCCTTTCCAGAAGATCGGAGGGCTGAAATTGTAGAGTGGATAAATCAAGGGGGAGGGGAGGTTGTTGAAGATCATACAAAGCAGAAAGTGCACTTCACTGTTGAATGTCATGGTGAGATACCAAGGAGTACAGATGTTCATACTACTTACGTGTCAAGTCATTGGGTCCGATCATGTTTAGAGGATGGATGCTTGTGGGATACCAATGGGCACATTCTCTATTCTCCTCTTCCTTGCCGTGTCCCTTTGTCTGGGTTTGAAAACATACGGTTCTGTGTTTCACAATATGATGATAAAGACAGAGTACTGTTAAGAAATCTGTGTTTTGTACTTGGGGCCAAGTTTGTGGAGAAGTTGACAAAGAAGGTAACACATCTAATATGTAAGTTTTCCGATGGGATGAAGTATGAGGCTGCTTGTAAATGGGGAATACATTCAATTACAGCTGAATGGATATATGAGTGTGTCAGACAGAGTAAGATTGTTTCTCTTGATTTGTATCGCCCAAAAGAAGTTACAGCTCAAGACAGAGCGGCAGGCTTATGCACTGTCAGTCAGTTTCCTACTCAAACTGTCCAAAGGATAGCCAGCGAAAGTGAATCCCAGTTTCCTATCCATTCTGCTATCCCGAGAGACCAATCAACTGGAACTAACAGTAGCTCTATAGGAGAAGTTGAACAAATAAGTTTTACTAAAAAAAGGCGCAAGTTCCTTGACGAAGCTATACAAAAGCGTTCACTTTTTGTTGGAAACAGTTCCACTCATTTTGACTGCAATTTGAACTCCACAAAAGAAACTACATCAAAATCTTCTGTGGTAACTTCACACGTCCCTGATGTCGCTGCCGCAATTGAGGATTTGTTGGAGCAGACAACTAAGATTCACGATCAGAAGTCACCTGGAAAGACTGACTGCGACAAAAGTATTTTCCCGCCCGACTGTTCGGGCGTTGGTCAAGACCATTCAGAAGCTCCTCCAATTGGTGGTTTATCCAACCAGTGGTCAAAAAGAGCTGAAAGAAAAGAAGACGTCAACAATCCTACTACTGGAGATGGGAGTGTAGGCATATATGATGGCTTTAGTGAAACACAAACTGAGTCTCAGGTTGTGGGTTATGAAGAGGATTTGTCAGGAAGGCAAATGCTCATAGACAGAGTTCGAACTCGGAGTAGCATGACTTGAAACTACATCTGCTCTTGTAAATACACAAAGCCTTAAAGATCGTGGTAGGACTAGCTGCTGCGTTTTGAAGGTTTGATTAGAAGTCCTTTTCCAAATGAGTTTAATGTTATTCAAGCATTATTTCCATTTAGGAGTTGTAGAAAATATTTGAACCTTGATTGGTTGTATAGTTATAACCAAAAAGACCAAAAAAAAAAAAAAAAAAAGAAATCATTGAAAGATCAGTTTTGCATGGGGTTTTTATCCATTGTCTTGTGATTCAATGACATCTTGGCACTTGTAAGCTGGAAATTGAGCTATACTAAGCCGTTTTGCAAGTTATAGCCGTTTTGCAAGTAACACAGAAGATTTGTGGAGATTTTCGGCTAACTGATGGATGGTTATTCTACTGCCCTCTAAAAGGTGGGTTGAACGGTGGTGAACCGAACGGCTAAAAAACGTGGACGAGGCTGGGACGGCGCGCAAAGGGGCTGAGACACGAAGAAGCG 3512 42.11 MLKPKPFAGANVFVSRNLVAPEMFDALHDALKQNGAEVFLCCDPSRNGPNDYHVISSPDHEKFEDLRAKGCNLLGPQCVMSCAKEHRPLPQQGFTCCLAMDGVKILASGFQEDEKVEIGKLVNAMGGVLHMKASLDVSFVIAKNALAAKYKWALNISKKPIVTFAWLQQCWIEHRVVPQEGYRVLPFSGLNISVSRIPAGERKEIEKLILQNGGRYSADLTRKCTHLICDAPEGDKYKVARTWGRINIVTRKWFDQSIARKACLNEELYPVGSVSGTSNKMTRGCLTAHNSQEKITGNLQAVPSSFIADSNFSAVSGPGFSDMDFEATLSQSTSMFSDASHFINEVDVEVPVVMGKNEENTDNCIANDFQSENDLYLSACRIKVVGFEASEMRKIVNMILRGGGSRYMLFNDKLTHIIVGNPSEMEKKEVRDIAASGVIHVVRANWLEDCDRQKKEIPILGRHMAYDELIPKASSKTSTIVMDPNKVPNVHPSVPSNVLEGNVHVRIGKTSTTEEKIEEKIETNVSGDRTMKLSQKSHQCVANGTNKSQEKMWRDFMVPSGKSSCVFKGKIFCFSSSFPEDRRAEIVEWINQGGGEVVEDHTKQKVHFTVECHGEIPRSTDVHTTYVSSHWVRSCLEDGCLWDTNGHILYSPLPCRVPLSGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFSDGMKYEAACKWGIHSITAEWIYECVRQSKIVSLDLYRPKEVTAQDRAAGLCTVSQFPTQTVQRIASESESQFPIHSAIPRDQSTGTNSSSIGEVEQISFTKKRRKFLDEAIQKRSLFVGNSSTHFDCNLNSTKETTSKSSVVTSHVPDVAAAIEDLLEQTTKIHDQKSPGKTDCDKSIFPPDCSGVGQDHSEAPPIGGLSNQWSKRAERKEDVNNPTTGDGSVGIYDGFSETQTESQVVGYEEDLSGRQMLIDRVRTRSSMT 969
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 72690256 72707377 - XM_039042828.1 Bhi09g02713 45330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02713 969 SUPERFAMILY BRCT domain 186 272 IPR036420 -
Bhi09g02713 969 PANTHER DNA REPLICATION REGULATOR DPB11-RELATED 7 957 - -
Bhi09g02713 969 Gene3D BRCT domain 559 655 IPR036420 -
Bhi09g02713 969 MobiDBLite consensus disorder prediction 896 932 - -
Bhi09g02713 969 Pfam twin BRCT domain 191 253 IPR001357 -
Bhi09g02713 969 Pfam twin BRCT domain 103 166 IPR001357 -
Bhi09g02713 969 Pfam twin BRCT domain 666 727 IPR001357 -
Bhi09g02713 969 CDD BRCT 103 170 - -
Bhi09g02713 969 CDD BRCT_TopBP1_rpt2_like 662 735 - -
Bhi09g02713 969 ProSiteProfiles BRCT domain profile. 662 745 IPR001357 -
Bhi09g02713 969 Gene3D BRCT domain 354 460 IPR036420 -
Bhi09g02713 969 ProSiteProfiles BRCT domain profile. 100 184 IPR001357 -
Bhi09g02713 969 SUPERFAMILY BRCT domain 374 458 IPR036420 -
Bhi09g02713 969 SUPERFAMILY BRCT domain 566 651 IPR036420 -
Bhi09g02713 969 SMART BRCT_7 374 454 IPR001357 -
Bhi09g02713 969 SMART BRCT_7 184 261 IPR001357 -
Bhi09g02713 969 SMART BRCT_7 564 639 IPR001357 -
Bhi09g02713 969 SMART BRCT_7 97 174 IPR001357 -
Bhi09g02713 969 SMART BRCT_7 4 86 IPR001357 -
Bhi09g02713 969 SMART BRCT_7 659 735 IPR001357 -
Bhi09g02713 969 ProSiteProfiles BRCT domain profile. 372 464 IPR001357 -
Bhi09g02713 969 Pfam BRCT domain, a BRCA1 C-terminus domain 564 644 IPR001357 -
Bhi09g02713 969 Gene3D BRCT domain 659 752 IPR036420 -
Bhi09g02713 969 CDD BRCT_TopBP1_rpt2_like 186 261 - -
Bhi09g02713 969 Gene3D BRCT domain 186 273 IPR036420 -
Bhi09g02713 969 ProSiteProfiles BRCT domain profile. 182 271 IPR001357 -
Bhi09g02713 969 SUPERFAMILY BRCT domain 57 184 IPR036420 -
Bhi09g02713 969 Gene3D BRCT domain 98 185 IPR036420 -
Bhi09g02713 969 SUPERFAMILY BRCT domain 627 746 IPR036420 -
Bhi09g02713 969 Gene3D BRCT domain 24 94 IPR036420 -
Bhi09g02713 969 ProSiteProfiles BRCT domain profile. 562 649 IPR001357 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02711 Bhi-Chr9:72690256 Bhi09g02713 Bhi-Chr9:72690256 0 dispersed
Bhi09g02712 Bhi-Chr9:72690256 Bhi09g02713 Bhi-Chr9:72690256 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02713 K10728 - csv:101212525 1706.81