Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02766 CAGGGCGGCCAAGGAGAATTGAAAGTTGAACCCCATTGTTGTTTGAATTTACAGTTTATACCAAACGTGAAACGACTTTCTCTTGCTTTGTTTAGGGGTTTCGTACGGGTACAGCAGGGAAGGTATGAGGAAATACCACCCAGTTCCAGTTACTTATTAAAAAGTTGCCGACCGACCTGAAGATTAAGATCAAGATTAACAAGATTATTGATTGTACAGATTTCCCATCTTCCTTTCTCTGCCTTCTTCTTCTCCTTCAACTTCCTTCAACTTCGCAGTTCACAGATCTCAGATCCAAATCCGATTCTTCTCTACCTAATTTCTTCGACCTATGGCCGATCTATTTCACCCCTTTCATGTCTTCCCTCCCCTCTCTTCTTCTTTTCACTTCCGCCGTCTCCTCACGTAGATTCATTCACTTTCAGTTCTCTCTTCTTCACTTTTCTTTGCCTTTCTTTGCCTTCCCCCACTTTCTTCTTCTTATGGATTAACTTTCTTCACCCTTTCCCCCCTACATACACCCATCTTCCCTTCCCATAACTTTATCATCCTTCCCTTCTTCTTCTTCCTCCATGGACGACCTCGGTGCCCAGGTTGTTCCTCCTATTTTCATCCACCAGACCTTGTCCAGTCGCTACACTGATCTGCCTTCCATCCCCAAGAAGCGTGCTTTATCTTATCAGGTCCCCAACTTTCATCATCAGGGTCAACTCCATCCTCATACTTGGAACCCTAAGGCTTGGGATTGGGATAGCGCTAGATTCCTCACCAAACCCTCCAACCACTCCGATTCTCTTTCATCCCAGCTCAAGAGGAAAGACGATTTCGCTGCTGCTGCTGCTGCTGCTGCTACTCCCTCCACCTTCAACAACAAGACGCTCGACGACGAGGATGAGAGTCTTCGCCTTAATCTTGGTGGTGGTTTCAATTTGAATTACGTTGAGGAGCCCGTGTCCAAACCTCCCAAAAAGGTCCGCCCTGGATCTCCCGGCTCTGTCACCTACCCTATGTGCCAGGTCGATAATTGTAAGGAAGATCTGTCCAATGCCAAAGACTATCACCGCAGACACAAAGTTTGCGAGGTCCATAGCAAATCTTCCAAAGCCCTAGTTGCTAAACAGATGCAGAGGTTCTGCCAGCAGTGCAGCAGATTTCATCCTCTTTCGGAATTTGATGATGGGAAGAGGAGCTGTAGGAGGAGACTTGCGGGGCACAACTGGCGTAGAAGAAAGACACAGCCCGAGGATGTAACCTCAAGGCTGACCCGGCCAGGAAGTAGAGGACCCCCAAGCACTGGGAATTTGGACATCGTCAGTCTATTGACTGTTCTAGCTAGGGCTCAAGGGAAAAACGAAGACCAGAGTGTGAAGAGCTTGCTATCAGCAAATAGTGACCAGCTCATTCAGATCCTCAGTAAGATCAATTCACTTCCTTTACCAGCTGACCTTGCAACGAAGTTGCCCAATTTAGAGAATTTTAGGGGGAAGGCTCCTCCGCAAAGTTCTTTGCAGCACCAAAACAAATTAAATGGAAATCCATCTTCTCCTTCGACCATGGACTTGCTTACTGTACTTTCAGCTACTTTAGCCGCATCAGCTCCAGATGCTCTCGCAATGCTGTCGCAGAAGAGCAGTGTCAGCAGTGATAGTGAAAAAACAAGGTCGTCGTGCCCATCTGGTTCTGATCTCCAGAATAGGCCTCTGGAACTTCCTTCAGTTGGAGGAGAAAGAAGCAGTACCAGTTACCAGTCTCCCATGGAAGATTCAGAAGGACAGGTTCAAGGAACTCGAGTTGGTTTGCCACTTCAGCTGTTTAACTCTTCGCCTGAACATGATGCCCCACCAAACTTGGCGGCTTCTAGAAAGTACTTCTCTTCTGATAGCAGTAATCCTATTGAAGAGAGATCTCCGTCATCTTCACCTCCTCTCCTGCAAAAGTTGTTCCCTGTGCGGAGCACAGAAGAAACTACCAGTAATGGGAAAATACCAATCAGAAAAGAAATTAGTGGTGTTGAGGTTCGAAAGCCTCCTAGTAGCAATATTCCGTTTGAACTCTTCAGAGAGTTAGATGGGGCCAGACCAAATTCCTTTCGAACTGTTCCGTATCAAGCTGAATACACTTCTTCGGGGTCTGATCATTCACCTTCTAGTTTAAATTCTGATGCTCAGGATCGCACTGGAAGGATAAGTTTTAAACTCTTTGATAAGGATCCTAGTCAGTTTCCAGGGACATTGCGGACACAAATATACAATTGGCTGTCTAATTGTCCGTCTGAAATGGAAAGCTACATACGGCCTGGTTGCGTGGTTCTGTCGGTTTATATGTCTATGTCATCCATTGCATGGGAACAGCTCGAAGAAAATTTGGATCTGCATGTTAAATCTTTGATTCATAACGAAGAACTTGATTTTTGGAGAAGTGGAAGATTTTTAGTTCACGCCGGGAGGCAACTAGCGTCACACAAGGATGGGAAGATTCGTCTGAACAAATCCTCAAAAGCTTGGAGTAATCCAGAGTTAATCTTGGTGTCCCCTTTGGCAGTTGTGGGTGGACACAAGACCTCCTTTTTATTAAGGGGAAGGAATTTGAAAAATCCTGGCACCAGGATTCATTGCACATCTATGGGAGGCTATGTATCTGAAGAAGTAATGGGATTAAGCAGGCAGGGAATATACGACGAGATACATTCTGGAAGTTTCAAAGTTGGGGATGTATCAACTACTACTCTTGGTCGTTGTTTCATTGAGGTGGAAAATGGTTTTCGAGGAAATAGTTTCCCTGTTATCATAGCTGATGCTACCATCTGTAGGGAATTGAGGCATCTTGAGTCCGATTTTGATGAGTTTAAAGTACCTGATATCTGTTCAGAAAGTAATTCATATGATCCTTCGCAGCCAAGGCTAAGGGATGAAATTTTGCAGTTCTTGAATGAACTTGGATGGTTATTCCAAAGGGAAAGGTCCTCTTACGAGCTAGATAATCCAGATTTTTTAATAAGGCGGTTCAGATTTTTACTCACGTTCTCAGCAGAGAGGGACTTCTGTGCGTTGGTGAAAACACTTCTTGACATTTTAGCTAAAAAATGCTTGATCACAGATGGACTGTCAATGAAATCGTTGGAGATGATATCTGAGATTCAGCTCTTAAACCGGTCAGTGAAAAGGAGGTGCAGGCGGATGGTTGACTTACTTGTTCATTATCACGTATCTGGTTTTGGTGATGCAGAGAAAAAGTACCTCTTTCCACCGAATTTTATTGGTCCTGGTGGTATTACGCCTCTGCATTTGGCAGCGTCGATGACAGATGCAGATGATTTGGTTGATGCACTAACAAATGACCCGCTAGAGATTGGGTTGGGGTGCTGGAGTTCCCAACTTGATGAAAACGGGCAGTCACCACGGGCTTATGCTTTAATGAGGGGTAATCATTCTTGTAACGAGCTGGTGGAGCGAAAACTTAGTGATAGAAAGAATGGTCAAGTTTCAGTAAGAATTGGGAATGAGATAGAGCAAGTAGAGGTGTCTAGTGGTGAGCGGGGCAGGGTGCAAGGTAGGTCCTGCCCCAGGTGTGCTGTTGTTGCAGCGAAGTGCAGCAGGAGGGTTCCTGGGAGTGGGACACACAGGTTACTTCATCGGCCCTACATTCATTCAATGCTTGCTATAGCTGCTGTGTGCGTTTGCGTGTGCCTATTTTTGCGAGGTTCCCCGGACATTGGTTTAGTTGCACCCTTCAAATGGGAGAACTTGGACTATGGGACAATTTAGTTCGAATGGACTTGGAGATGGAGTGAGGTGCTGAATAGAAAACATGAGGAATCAAACCGGAAGGCCAAAGAAGGGACAGGGGTTGGTAAGATGAGAATCTCTTGCCGTGAATAATGAAAAGATGAGAAGGCTAGGGAGGAAATACAAGATTGTTGAGGTTTAGCTAATGAAGAAGATGTCAACTAATGGTCGCTCTGACGTTATGAAGTTGTGAAGTAGAGACAGAGATGGATTAGTTGGAAGGGGATTGTATTGTATTGTTTTGCATCTGTGGACAAGACTGAGGTTTGGGGTTTTGAAATGTAGCGTAGCCTGCCCGCAACAGGGCTGCCTCGGGACGAGCAGGTCGACAATGATGAATGATTTTGAAGAAGAAAGGATGGAACAGAAGGTTTGATTTTACTTGGTGAAGCATGTTTTGCTTTGCCTTTCCCTGACCCCCACCCCGTCTTCCTTCCCCCGTTTTTTTCCTTTCTTTTTTTATTTTTTATTTAATTGTCATTTCTTAGTAGCACGCCATACAGTAAGCAGTAAGTATGAATATAATCTAATATATAAATATTACAGTTGTCTCAAACAACACAATGTAAAGTTGATCCAATCACATTTATACTTTTACAAGACTTTTTGTCAAGGAAAGAGGCCCAGTGCAAGAACTGTTCTGTACCCAA 4435 44.69 MDDLGAQVVPPIFIHQTLSSRYTDLPSIPKKRALSYQVPNFHHQGQLHPHTWNPKAWDWDSARFLTKPSNHSDSLSSQLKRKDDFAAAAAAAATPSTFNNKTLDDEDESLRLNLGGGFNLNYVEEPVSKPPKKVRPGSPGSVTYPMCQVDNCKEDLSNAKDYHRRHKVCEVHSKSSKALVAKQMQRFCQQCSRFHPLSEFDDGKRSCRRRLAGHNWRRRKTQPEDVTSRLTRPGSRGPPSTGNLDIVSLLTVLARAQGKNEDQSVKSLLSANSDQLIQILSKINSLPLPADLATKLPNLENFRGKAPPQSSLQHQNKLNGNPSSPSTMDLLTVLSATLAASAPDALAMLSQKSSVSSDSEKTRSSCPSGSDLQNRPLELPSVGGERSSTSYQSPMEDSEGQVQGTRVGLPLQLFNSSPEHDAPPNLAASRKYFSSDSSNPIEERSPSSSPPLLQKLFPVRSTEETTSNGKIPIRKEISGVEVRKPPSSNIPFELFRELDGARPNSFRTVPYQAEYTSSGSDHSPSSLNSDAQDRTGRISFKLFDKDPSQFPGTLRTQIYNWLSNCPSEMESYIRPGCVVLSVYMSMSSIAWEQLEENLDLHVKSLIHNEELDFWRSGRFLVHAGRQLASHKDGKIRLNKSSKAWSNPELILVSPLAVVGGHKTSFLLRGRNLKNPGTRIHCTSMGGYVSEEVMGLSRQGIYDEIHSGSFKVGDVSTTTLGRCFIEVENGFRGNSFPVIIADATICRELRHLESDFDEFKVPDICSESNSYDPSQPRLRDEILQFLNELGWLFQRERSSYELDNPDFLIRRFRFLLTFSAERDFCALVKTLLDILAKKCLITDGLSMKSLEMISEIQLLNRSVKRRCRRMVDLLVHYHVSGFGDAEKKYLFPPNFIGPGGITPLHLAASMTDADDLVDALTNDPLEIGLGCWSSQLDENGQSPRAYALMRGNHSCNELVERKLSDRKNGQVSVRIGNEIEQVEVSSGERGRVQGRSCPRCAVVAAKCSRRVPGSGTHRLLHRPYIHSMLAIAAVCVCVCLFLRGSPDIGLVAPFKWENLDYGTI 1063
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 73688867 73694827 + XM_039044151.1 Bhi09g02766 45383

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02766 1063 MobiDBLite consensus disorder prediction 351 469 - -
Bhi09g02766 1063 MobiDBLite consensus disorder prediction 304 326 - -
Bhi09g02766 1063 MobiDBLite consensus disorder prediction 430 469 - -
Bhi09g02766 1063 Pfam SBP domain 147 220 IPR004333 GO:0003677
Bhi09g02766 1063 MobiDBLite consensus disorder prediction 213 243 - -
Bhi09g02766 1063 MobiDBLite consensus disorder prediction 351 375 - -
Bhi09g02766 1063 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 14 39 1063 - -
Bhi09g02766 1063 MobiDBLite consensus disorder prediction 383 400 - -
Bhi09g02766 1063 SUPERFAMILY SBT domain 145 225 IPR036893 GO:0003677|GO:0005634
Bhi09g02766 1063 MobiDBLite consensus disorder prediction 227 243 - -
Bhi09g02766 1063 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 39 1063 IPR044817 GO:0003677
Bhi09g02766 1063 ProSiteProfiles Zinc finger SBP-type profile. 144 221 IPR004333 GO:0003677
Bhi09g02766 1063 MobiDBLite consensus disorder prediction 300 326 - -
Bhi09g02766 1063 Gene3D - 138 208 IPR036893 GO:0003677|GO:0005634
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02766 - - - cmax:111474399 1833.15
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02766 Bhi-Chr9:73688867 Bhi11g01308 Bhi-Chr11:38749388 7.46E-38 dispersed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi11g01308 . 180 1014 SBP-box Gene Family AT2G47070 55.2 6.2e-239 824.7
Bhi11g01309 . 180 1014 SBP-box Gene Family AT2G47070 55.2 6.2e-239 824.7
Bhi11g01310 . 180 1014 SBP-box Gene Family AT2G47070 55.2 6.2e-239 824.7
Bhi11g01308 . 25 1014 SBP-box Gene Family AT3G60030 54.3 8.3e-278 954.1
Bhi11g01309 . 25 1014 SBP-box Gene Family AT3G60030 54.3 8.3e-278 954.1
Bhi11g01310 . 25 1014 SBP-box Gene Family AT3G60030 54.3 8.3e-278 954.1
Bhi12g02448 . 15 163 SBP-box Gene Family AT5G50570 55.3 2.8e-40 163.7
Bhi12g02449 . 15 163 SBP-box Gene Family AT5G50570 55.3 2.8e-40 163.7
Bhi12g02447 . 15 163 SBP-box Gene Family AT5G50570 55.3 2.8e-40 163.7
Bhi01g02096 . 159 262 SBP-box Gene Family AT5G50570 64.4 2.5e-36 150.6
Bhi09g02766 . 1 1063 SBP-box Gene Family AT1G20980 50.1 1.1e-265 914.1
Bhi09g02766 . 1 725 SBP-box Gene Family AT1G76580 50.2 2.5e-170 596.7
Bhi11g01308 . 180 1014 SBP-box Gene Family AT2G47070 55.2 6.2e-239 824.7
Bhi11g01309 . 180 1014 SBP-box Gene Family AT2G47070 55.2 6.2e-239 824.7
Bhi11g01310 . 180 1014 SBP-box Gene Family AT2G47070 55.2 6.2e-239 824.7
Bhi11g01308 . 25 1014 SBP-box Gene Family AT3G60030 54.3 8.3e-278 954.1
Bhi11g01309 . 25 1014 SBP-box Gene Family AT3G60030 54.3 8.3e-278 954.1
Bhi11g01310 . 25 1014 SBP-box Gene Family AT3G60030 54.3 8.3e-278 954.1
Bhi12g02448 . 15 163 SBP-box Gene Family AT5G50570 55.3 2.8e-40 163.7
Bhi12g02449 . 15 163 SBP-box Gene Family AT5G50570 55.3 2.8e-40 163.7
Bhi12g02447 . 15 163 SBP-box Gene Family AT5G50570 55.3 2.8e-40 163.7
Bhi01g02096 . 159 262 SBP-box Gene Family AT5G50570 64.4 2.5e-36 150.6
Bhi12g02448 . 15 163 SBP-box Gene Family AT5G50670 55.3 2.8e-40 163.7
Bhi12g02449 . 15 163 SBP-box Gene Family AT5G50670 55.3 2.8e-40 163.7
Bhi12g02447 . 15 163 SBP-box Gene Family AT5G50670 55.3 2.8e-40 163.7
Bhi01g02096 . 159 262 SBP-box Gene Family AT5G50670 64.4 2.5e-36 150.6
Bhi09g02766 . 1 1063 SBP-box Gene Family AT1G20980 50.1 1.1e-265 914.1
Bhi09g02766 . 1 725 SBP-box Gene Family AT1G76580 50.2 2.5e-170 596.7
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012096 0 1 1 0 0 0 1 0 0 1 1 0 2 1 1 2 0 0 1 0 1 1 1 1 1 1 1 1 3 1 24
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1976 PF03110 SBP 2.90E-29 No_clan Bhi TF