Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02828 AAAATATACTAAATTATAATTAAATATTCAGAATTCCTGCATTTCTCGCTGGAAAAAAAAGCCCTTGGAGCTGAGCTGCTTGCTTTTTCGTTCCGAAGCCTTTCGATTTCTTTCCCCTTTTTGTTTTTCATCTCCGCTATTTTTCATTTATTATTTGGGATTGGGACTTCCTTGTATGGAATTATAGTTCCAGCGAAGGAGAACAATGTCGGGATCTGAGACCGGAGTGATGTCCAGCGGCGAGCCCTTCACCATCGGTCTCCAGAAGAATTCAGTACAATCACAACAGTCGGTCATGCAGGGCATGCATTTACCCTTCGGCGCCGACGGCGTCTACAAGCCCGTTGCCGCCGCCTCTCCCACCTACCAGTCCTCCGGCGTCGGAGTTGCCGGTAATGCCGGTGCCGATGGATCTGCTCGTGAAGCTTTCGTTAACATGAATTCACAAAGCGAGCCTGTAAAGAGGAAGAGAGGGAGGCCTCGGAAGTATGGGCCAGATGGCAGTATGGCACTGGCTCCTGCAGTCCGCTCTGCCGCTGCAACTCAGCCCAGTGGAGGTTTTTCTCCTCCACCCACCGCCGCGCCTCCGTCTGGAGGATCAGCTTCTCCAACTTATTTGAAGAAAGCCAGAGGCAGGCCCCCTGGCTCCTCCACCAAAAAACAGCAGTTGGATGGTTCGGGGTCAGCAGGAGTTGGATTTACCCCACATGTCATCACCGTAAAAGCTGGAGAGGATGTATCTTCGAAAATAATGTCATTTTCACAGAATGGTCCTAGAGCTGTTTGTATCCTTACGGCAAATGGAGCAATATCCAATGTGACTCTACGTCAACCAGCCATGTCTGGCGGAACCGTGACTTACGAGGGGCGATTTGAGATTTTATCGCTATCTGGATCCTATCTCCTCTCCGAGAACGGTGGCCAGCGGAGTCGAACGGGAGGTTTAAGTGTTTCATTATCTGGACCAGATGGTAGAGTATTAGGTGGTGGAGTGGCTGGTCTTCTAACGGCAGCATCTCCTGTACAGGTGGTGGTGGGGAGTTTCATCACTGATGGGGGGCACAAGGAATTGAGTGTAAACCAAATAGAACAGCTGCCTGTTACTGCACCCCATAAACTTGCTCCGATCCGTGCTGGAATGACAGGGGCCAGCAGCCCGCCATCACGTGGGACTCTCAGTGAATCCTCAGGAGGGCCCGGGAGTCCGTTTAATCAGAGTGGTGGAGCCTGCAATAATAACCCCATACCTTGGAAGTGAAACTCGAGTTGCTTCGTTAACTCACTTGATTTGCTAATATGGCAGGCCAACATGGAATCTGGTGCTCTATTTTCTAATTTGTTTTAGATGCACCTGTAATTTAAGTTTAGCCTTACAGGATAATGTAACTCTTTCCAGTTTGGGTTGGCTTGTGCCCGCTGGAAACAAAAGACGACACCAATAGTTTCAGTTAGGAATTATAAGTTTATGAAATAGCTGTGTTTTGTTTATTATTAAGATAGTGGTGGAATTGCAAATGATGAGTTTATTTCAA 1532 48.24 MSGSETGVMSSGEPFTIGLQKNSVQSQQSVMQGMHLPFGADGVYKPVAAASPTYQSSGVGVAGNAGADGSAREAFVNMNSQSEPVKRKRGRPRKYGPDGSMALAPAVRSAAATQPSGGFSPPPTAAPPSGGSASPTYLKKARGRPPGSSTKKQQLDGSGSAGVGFTPHVITVKAGEDVSSKIMSFSQNGPRAVCILTANGAISNVTLRQPAMSGGTVTYEGRFEILSLSGSYLLSENGGQRSRTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFITDGGHKELSVNQIEQLPVTAPHKLAPIRAGMTGASSPPSRGTLSESSGGPGSPFNQSGGACNNNPIPWK 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 75017296 75020914 + XM_039042164.1 Bhi09g02828 45445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02828 350 SUPERFAMILY AF0104/ALDC/Ptd012-like 165 283 - -
Bhi09g02828 350 MobiDBLite consensus disorder prediction 316 350 - -
Bhi09g02828 350 Pfam Plants and Prokaryotes Conserved (PCC) domain 167 280 IPR005175 -
Bhi09g02828 350 ProSiteProfiles PPC domain profile profile. 161 301 IPR005175 -
Bhi09g02828 350 Gene3D - 167 297 - -
Bhi09g02828 350 MobiDBLite consensus disorder prediction 72 163 - -
Bhi09g02828 350 CDD DUF296 166 280 IPR005175 -
Bhi09g02828 350 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 10-LIKE ISOFORM X1 16 344 - -
Bhi09g02828 350 SMART AT_hook_2 139 151 IPR017956 GO:0003677
Bhi09g02828 350 SMART AT_hook_2 86 98 IPR017956 GO:0003677
Bhi09g02828 350 MobiDBLite consensus disorder prediction 309 350 - -
Bhi09g02828 350 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 16 344 IPR039605 GO:0003680
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01204 Bhi-Chr4:29285074 Bhi09g02828 Bhi-Chr9:75017296 4.15E-133 dispersed
Bhi09g02828 Bhi-Chr9:75017296 Bhi11g00147 Bhi-Chr11:3375138 2.86E-70 dispersed
Bhi09g02828 Bhi-Chr9:75017296 Bhi09g02829 Bhi-Chr9:75017586 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02828 - - csv:101207513 567.0