Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02840 GCCGTTAGAATTGGGGTGGGTGAGTCTAATCGGAAGCTCCGAAAAGCGGAAAAACGCAAGCCCGATTCCCGTGTCCAGTATAAAAGCCCCTCAAAATCCCCTCGAAACGACAAACGTTACGCCCACGGTTGATTCAAAACGACTGCCCTTCTCATCTCTCATCTTATAGGTCTCTTCCTTTCTCTCGCCGCTTCAAATGCGTCCCTTCAGGTACCTTGCCGGCGTCAACTCCTCCGCCATCTCCGACACGCCCGAGCCCGAGAGGTATGACTCTGACTTCGTCATAATCCTCGCTGCCCTCCTCTGCGCCTTGATTTGCGTTCTCGGTCTTGTTGCTGTTGCTCGCTGCGCCTGGCTACGCCACCTCGCCGGCGATGGTGGCGGCGCTGCTTCCACTCGTTCTCCTCCGCCTCCTGCCTCCAACAAAGGTCTCAAAAAGAAGATCCTGAGGTCTCTTCCGAAGTACACCTTCACCGCTGAGTTTTCTGCTCAGTTCTCAGATTGCGCGATCTGCCTCGCGGAGTTCGTTGTCGGTGATGAAATTCGGGTGTTGCCGCAGTGTGGCCATGGATTTCACATGTCCTGCATCGATATGTGGTTCCGATCTCACTCTTCCTGTCCTTCCTGCCGTCAGATTCTGGTGGTAAGTCAGTGCCAGAAGTGCGGCGGTTTTCCGGCGAGCTCAAGTTCGAACGGTGGGACGGAATCCAGAGTAAAAGAGGAAGGAGATGATAAGACGAATAGCGGAGATGGCATAACTTCACAGTACAGACGATGAATTCAAAAAGGGGAACAGTATGAGTATCATGTGGATGGTGGACACTGCAACAGCCAATGTGATTTGTTTAATTCCATTTTGGATCGCATTTTTCAGCAGCAAATGGCTTCCCTCTCTGCATCTCTCTTCAACAAATGCCAATTTCTCTCTTTCCTCCCCACTGAAGATTTTAAGAGGTCAGATCCATAAAGTTTTCAAAATGGAATAATTCTGCAACTGCTCCATTTGCTATTTAAAAATTACCAAATCCCCAATCCATTTTTTTTACCTTCCATAGCCATGGCTGCTCTCTGTCCTTTTCACTTTCACTTATATGATAATCACTATCAAATTTTTTAGGTTTTAAA 1125 48.71 MRPFRYLAGVNSSAISDTPEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRSPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFVVGDEIRVLPQCGHGFHMSCIDMWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNSGDGITSQYRR 193
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 75187962 75189325 - XM_039042684.1 Bhi09g02840 45457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02840 193 ProSiteProfiles Zinc finger RING-type profile. 103 145 IPR001841 -
Bhi09g02840 193 MobiDBLite consensus disorder prediction 160 193 - -
Bhi09g02840 193 SMART ring_2 103 144 IPR001841 -
Bhi09g02840 193 SUPERFAMILY RING/U-box 84 151 - -
Bhi09g02840 193 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 2 179 - -
Bhi09g02840 193 PANTHER RING-H2 FINGER PROTEIN ATL8 2 179 - -
Bhi09g02840 193 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 149 IPR013083 -
Bhi09g02840 193 CDD RING-H2_EL5_like 102 145 - -
Bhi09g02840 193 Pfam Ring finger domain 102 145 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02840 Bhi-Chr9:75187962 Bhi11g00331 Bhi-Chr11:7606244 1.76E-61 dispersed
Bhi09g02840 Bhi-Chr9:75187962 Bhi09g00258 Bhi-Chr9:5400162 1.20E-22 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02840 - - csv:101207021 333.569