Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02871 ACCCCCGCAATCAATGTTAGAGTGCGCGTCCGACGTGGCATGTTTTTTTTTAGGGTCCAGTCCAATTCTTCTTCTTCTTCTTCTTCTTCTTCGAGTGCTTTCCCCCCTTTTTGCTTTGCTTAGAGGAGAAAAATGGAAATGGCCAAATGGGTTAGCTGAGAATAGAGAGAAAGAGAGAGAGAAACGAACCCACAAGTTGCAGAAGCAGAGGATGATGGAGTGGCAGAACCAGAACCAGCAGCAACAGAACCAAACTGAGCAATTGCAAATGCAAATGCAGGTGGAGCAATTGAGCAACGCCGATGGAGTTAGTGGCCTCTATGTCAAGGTGATGACCGATGAGCAAATGGAGCTTCTCAGGCAGCAGATCTCTGTCTATGCTTCCATTTGTGAGCAGCTTGTCGAGATGCACAAGGCAATCACCGCCCAGCAGGACCTTGCGGGAATGAGGCTTGGGAATCTTTACTGTGATCCAATAATGGCATCTGCTGCTGGTCACAAGATAACTGCCAGGCAGAGGTGGACGCCTACGCCTGTGCAGCTTCAAATTCTTGAGCAGATCTTTGATGAGGGCAATGGAACCCCAAGCAAGCAGAAGATCAAGGATATAACTCTACAGCTGACACAACATGGTCAAATTTCAGAAGCAAACGTTTATAATTGGTTTCAGAACAGAAGGGCTCGTTCAAAAAGAAAGCAAGCAAATTCAGTACCAAGTAATGCAGACTCAGAACCAGAGACAGAAGTTGATTCTCCAAAGGAGAAAAAGACTAAACCAGAAACCTTCCAAACTTACGAACACTTCGTTCCGAAGTCAGGCAACATATACTCTCAGAGAACTGATTTAAGTACTGAAATACATTCCTTTGACGTACAGTCGAATAAAGGGGAGCCCATGTTTCAGTCTTTCGGATCTGGTCATATCAGTCAGATGACTCCAATACAGAATCATAGAAATAATCTGTCGAATGATAAAATGAACGTGCCAGATTACTCTCCTTACACTCCTTGTGAAGGATATCACTTGGTCGAGTGATGCTTCTATCATTCCGCTGATGTGCTTGTCTGCTTGTCCTGAAGCTCATCCTGGAGGAATGTGCACTGACATAGTAAATATTATACTGCATGTAAAAGGAATTCAAATTTTGAAAATGCTTGTAAGGCATTTTATATACGTGGTTATGAATTATATAGCTTACTGTACTGCTTTAAACCAATTTTTGAAGGATTTGATTAAATACGTTATTACTTTTTGGTACAAAA 1263 42.6 MLECASDVACFFLGSSPILLLLLLLLRVLSPLFALLRGEKWKWPNGLAENREKEREKRTHKLQKQRMMEWQNQNQQQQNQTEQLQMQMQVEQLSNADGVSGLYVKVMTDEQMELLRQQISVYASICEQLVEMHKAITAQQDLAGMRLGNLYCDPIMASAAGHKITARQRWTPTPVQLQILEQIFDEGNGTPSKQKIKDITLQLTQHGQISEANVYNWFQNRRARSKRKQANSVPSNADSEPETEVDSPKEKKTKPETFQTYEHFVPKSGNIYSQRTDLSTEIHSFDVQSNKGEPMFQSFGSGHISQMTPIQNHRNNLSNDKMNVPDYSPYTPCEGYHLVE 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 75625226 75627067 - XM_039041929.1 Bhi09g02871 45488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02871 340 ProSiteProfiles 'Homeobox' domain profile. 163 228 IPR001356 GO:0003677
Bhi09g02871 340 Coils Coil 53 87 - -
Bhi09g02871 340 CDD homeodomain 167 229 IPR001356 GO:0003677
Bhi09g02871 340 PANTHER - 68 330 - -
Bhi09g02871 340 SUPERFAMILY Homeodomain-like 166 229 IPR009057 -
Bhi09g02871 340 SMART HOX_1 165 232 IPR001356 GO:0003677
Bhi09g02871 340 MobiDBLite consensus disorder prediction 242 257 - -
Bhi09g02871 340 Pfam Homeodomain 167 227 IPR001356 GO:0003677
Bhi09g02871 340 Gene3D - 169 233 - -
Bhi09g02871 340 PANTHER WUSCHEL-RELATED HOMEOBOX 13 68 330 IPR044559 GO:0003700
Bhi09g02871 340 MobiDBLite consensus disorder prediction 224 257 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02871 Bhi-Chr9:75625226 Bhi11g00264 Bhi-Chr11:6084567 5.02E-92 dispersed
Bhi11g02705 Bhi-Chr11:72529669 Bhi09g02871 Bhi-Chr9:75625226 4.30E-14 dispersed
Bhi09g02871 Bhi-Chr9:75625226 Bhi08g01290 Bhi-Chr8:39357629 7.19E-14 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1981 PF00046 Homeodomain 1.20E-17 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02871 - - bhj:120085747 644.81