Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02931 TTATCTCAAAACGCACCGTTTTGGCGCCCTTCTTCTCTCAGCTCCGGGTCCGTTCTTCATTTTCCATTCTTTGGAGATAAAGGCCATTCGCCGTCGGGAAGGTCTAGATCTTTCTGGAAGCCATTTTCATATAACACCTCCGCTGTTCTGTCCCACCCCTTCATCGCCTTCGGAAAATTGCGCTCCTGTGGTTGGATTGAACCGAACTCCGACTACAAAAGATTTCGCCAGTGGTCTATTCTGATTCTCGACAACATTCATTTCCATCGGTGCCGGTTCTTGTTTCCGTTGCTTGTACTATTTTTTCTCGTCTGAAAAGACGGTAGCTGAAGTTGAATAGCATGGCGGACCATTCAAATGAAGGTTCCAGCACTAGCAGTAATTCCGGGGAGACTGCAACTTCCATTATTGAGCTGAACATCAAGACTTTAGATTCACATATCTACAGTTTTCAAGTGAATAAAGATATCCCGGTTCAATTATTCAAGGAGAAAATCGCAAGTGAAATAGGAATCCCAGTGAATCAGCAACGTTTGATATTCAGGGGAAAGGTTTTAAAGGATGAATGTTCTCTTTCTGAGTATCATTTGGAAAATGGACATACATTGCATTTAGTTGAAAGACAACCAACTCAGCAGCATGCAGCATCCGAAAGTAGCACTGGCGACAGACCAGCAAATGTACCTTCATCAACGGGTAACGAAGCTGGAGTTGGCGTCCCTAGAAATCGTGTTGGACAAATTGCACATAGTGTGGTTTTAGGAACATTTAATGTTGGGGATCAAGGTGAAGGCATTGTACCTGATCTTTCTCGGGTTATTGGGGCAGTTCTGAATTCTATTGGACTAAACAGCCAAAATACAAACATCCCTATGCAGTCTACAGTGCCTAACAATCGTGGCACAGCAAGTCAAGGAAATGAAACATTTAGAGCTAATAATGGGGTTGGAGGACAAGCAACGAGTCAGGCTCAAACTGGACAGGCATTTCCCGGCCAGCCATCACAAAGTTTTCCCCATGTGATTCAAATTCCACTTGCCAGTGCAGCCGTATCAGTTCCTTCCATTCATGCGCCCATTCCTGATTCTATAACAACACTTTCTGAGTTCATGAACCGTATGGAGTTTGCAATATCTCAGAATGGTGGAGATCTAACTAGGGTGGAACTGCCTACCAATCCCCAAGGTTTGCCAACCACTGAATCTTTGAGCATTGTCTTGCGTCATGCTCAACGGCTTCTAAGTGATTATGCCATATCTTCACTATCCCGTATTGCTGAGCGTTTGGAGCAAGATAGCTCTTCCACTGATCCCACTGTGAGGGGTCAAATTCAGGAAGAGTCGGTACAAATAGGACTTAGGATGCAACAATTTGGAGCGCTTCTTCTGGAATTGGGCCGTACAATCTTGACACTCCGTATGGGACAGTCACCTGCTGAGTCAGTTATTAACGCTGGCCCTGCAGTTTACATCTCTCCCATCGGGCCGAATCCTTTAATGGTTCAGCCTTTCCCCCTTCAAACTAATTCTCTCCTGGGTGGTGCTGTACTACCATCAAACCCAGTTGCTGTTGGCGCAGTTGGTATTGGAACTGCCCCTAGGCACATCAACATTCACATACATGCTGTTGGTACCAGGTCAAATAATGGGGAGGGGGCACCTGCAGAGCGTCAGAATGTGGTCAGTGGAACTATGGATTCAGGTGTATCACAGGCACCTCCTGTCGTCAACATTCCACCTCCGCTGGGCGTATCGATTTCTGCTGCTGTGCAACCTGGTGAAGGTGTTTCTTTTTCCCAGCCTTCTCCTGACTCTGCTTCATTATCCTCCATTATTGCTGATGTCAATTCACGAATTAGAGATTTAGTTGGTAATGTTGGAGGTGGTAGCACTACTGAATCAGGTCAAGTGCAAACGGCAGTTCAGAATTCTTCTACTGGTTCTGGACAAGGGAGTGAACAGCACAGTGAAACGAAAAGAGACATGGGTGGAGAGTCGAGTGAGTCACTACCTGGGCGCAACCAGGAAACTGGAAGTGACAAGATTGTAAACACAGACAATATTTGTCGAGATACAGGAAGGGCTGTAAACCCGCCTGATTTACCAACATCCTCTGGAGGTAGAGGCTCTGAATTTGTTGGAAGAAATGAAGAAAATTTGCAGAGTCAGGCATCTTGTGAGAAGAGCACCGGAACGGGGTCTTCTCAAAGTGTTCCACTCGGACTTGGACTGGGGAGTTTGGAACGACCGAGGCGAGGCAGGCAGCAAAGTTCACAGGCTAAGGGGGGTAGCAGTGGAACCAGCCACAGCCAGGGTTTGACGGGCCAGCAGTTTTTACAATCTCTTGCCTCTAGTGCTTCTATGAATAGGTCAAGGGCTCATGAACCCCCCTCAGGCCTACATTCGACTTCTAGCCCAACTGTGGAAGGCAGATCCTTGCATGGGCCAGGTTCTGACAGCCAAATTGATCTGGGAAGCAGTATGTCTCAAGTTTTGCAGAGTCCTGCTTTGAATGGCCTATTGACGGGGCTTTCAGAGCAAGCTGGCGTTGGTTCTCCTGATGTCTTGAGGAACATGTTGCAGCAGCTCACGCAAAGCCCTCAGATGAGGAACACAGTCAATCAAATTGCTCAGCAGGTTGACCCTCAAGATATTGAGCACATGTTTGCCGGGTCAGGAAGAGGACAAGGCGGTGGTATTGATTTGTCCAGGATGTTCCAACAGATGATGCCTATCGTCTCTCAAGTGCTTGGAGGAGGGCCAATGCAACCGTCTTCCAACATGGACCGAGAGCCAAGACAACCACCTTTGTCAAATCTGGATAGAGAGCCAACGCCTCATAGTGAGAGGTCTGGTAGTGGAGTGGAAACATCTAATGACCCAAATTTTCAGATTGACTCCCAAGATCTTGCTCGAAGAATCACATCTACCAATTTGCCAAGGGACGTCTTCCGTGCAGTAGTTGAGAGCTCAGCTCGGCTTTCTGGCAGTAGTAGCGAAGATATCACAGATGAGTTGTGCAGCGATGAGAGACTTGCTAAGGAATATGTAGAGATGTTATCCAGTGATGTAAACCGACGGTTACAAGGGAATTCAGATCAGGACAAGTAATTCATACGTGGAAGGGTATTTATAGATTCGTGGGTGGAACTGGAATTGGAACTGGAAGCGGAACATTGGCTTGGCTGGTACTGGTGAATTAATTATTTATGCTATAAAATGCTTCTCCGGCCTTTTCCTTTATCTTCTTTTTCCATGTGCGTTGTCTTTATAGTCAGATGATGCTCCAAAGTAACTTATGTTACAATCTCTTTCTTTCTTTCCTCTCTTTTTTCTTTTCTTTTCTTTTCTTTTTTTTTAAATCATGTTTTGGCTTTAATTGTAGATTCTCTAGGTTGTAAAATACCTTCTCTTTCCCTCCCCCTTTTTTGGGTTAATATGACGACATATTTTTGAATCCTCTTTTAAGGTTATTATGAAATTCCATATTATTTATTGGTGCTACA 3505 45.51 MADHSNEGSSTSSNSGETATSIIELNIKTLDSHIYSFQVNKDIPVQLFKEKIASEIGIPVNQQRLIFRGKVLKDECSLSEYHLENGHTLHLVERQPTQQHAASESSTGDRPANVPSSTGNEAGVGVPRNRVGQIAHSVVLGTFNVGDQGEGIVPDLSRVIGAVLNSIGLNSQNTNIPMQSTVPNNRGTASQGNETFRANNGVGGQATSQAQTGQAFPGQPSQSFPHVIQIPLASAAVSVPSIHAPIPDSITTLSEFMNRMEFAISQNGGDLTRVELPTNPQGLPTTESLSIVLRHAQRLLSDYAISSLSRIAERLEQDSSSTDPTVRGQIQEESVQIGLRMQQFGALLLELGRTILTLRMGQSPAESVINAGPAVYISPIGPNPLMVQPFPLQTNSLLGGAVLPSNPVAVGAVGIGTAPRHINIHIHAVGTRSNNGEGAPAERQNVVSGTMDSGVSQAPPVVNIPPPLGVSISAAVQPGEGVSFSQPSPDSASLSSIIADVNSRIRDLVGNVGGGSTTESGQVQTAVQNSSTGSGQGSEQHSETKRDMGGESSESLPGRNQETGSDKIVNTDNICRDTGRAVNPPDLPTSSGGRGSEFVGRNEENLQSQASCEKSTGTGSSQSVPLGLGLGSLERPRRGRQQSSQAKGGSSGTSHSQGLTGQQFLQSLASSASMNRSRAHEPPSGLHSTSSPTVEGRSLHGPGSDSQIDLGSSMSQVLQSPALNGLLTGLSEQAGVGSPDVLRNMLQQLTQSPQMRNTVNQIAQQVDPQDIEHMFAGSGRGQGGGIDLSRMFQQMMPIVSQVLGGGPMQPSSNMDREPRQPPLSNLDREPTPHSERSGSGVETSNDPNFQIDSQDLARRITSTNLPRDVFRAVVESSARLSGSSSEDITDELCSDERLAKEYVEMLSSDVNRRLQGNSDQDK 922
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 76449940 76459823 + XM_039042101.1 Bhi09g02931 45548

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02931 922 MobiDBLite consensus disorder prediction 554 572 - -
Bhi09g02931 922 MobiDBLite consensus disorder prediction 805 819 - -
Bhi09g02931 922 MobiDBLite consensus disorder prediction 836 852 - -
Bhi09g02931 922 ProSiteProfiles Ubiquitin domain profile. 23 98 IPR000626 GO:0005515
Bhi09g02931 922 MobiDBLite consensus disorder prediction 802 852 - -
Bhi09g02931 922 MobiDBLite consensus disorder prediction 95 123 - -
Bhi09g02931 922 MobiDBLite consensus disorder prediction 95 126 - -
Bhi09g02931 922 SMART ubq_7 23 94 IPR000626 GO:0005515
Bhi09g02931 922 MobiDBLite consensus disorder prediction 513 539 - -
Bhi09g02931 922 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 3 921 - -
Bhi09g02931 922 MobiDBLite consensus disorder prediction 175 221 - -
Bhi09g02931 922 Gene3D - 11 108 - -
Bhi09g02931 922 SUPERFAMILY Ubiquitin-like 21 96 IPR029071 -
Bhi09g02931 922 MobiDBLite consensus disorder prediction 601 627 - -
Bhi09g02931 922 MobiDBLite consensus disorder prediction 637 697 - -
Bhi09g02931 922 ProSitePatterns Ubiquitin domain signature. 49 74 IPR019954 -
Bhi09g02931 922 PRINTS Ubiquitin signature 54 74 IPR019956 -
Bhi09g02931 922 PRINTS Ubiquitin signature 75 96 IPR019956 -
Bhi09g02931 922 Pfam Ubiquitin family 25 95 IPR000626 GO:0005515
Bhi09g02931 922 MobiDBLite consensus disorder prediction 510 710 - -
Bhi09g02931 922 PANTHER OS07G0498800 PROTEIN 3 921 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02931 - - - csv:101216180 1554.65
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02931 Bhi-Chr9:76449940 Bhi09g02933 Bhi-Chr9:76490055 8.11E-27 dispersed
Bhi09g02930 Bhi-Chr9:76449938 Bhi09g02931 Bhi-Chr9:76449940 0 tandem
Bhi09g02931 Bhi-Chr9:76449940 Bhi09g02932 Bhi-Chr9:76490055 2.84E-48 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g547 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Sed01g2452 . . . . . . . . Bhi09g02931 Tan01g5081 Cmetu07g1738 . . Mch11g0072 . . . . . . . . . . . Cme07g00072
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007185 1 2 1 0 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 2 0 36