Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02967 TCATAAAAAGAAAGAAAATTGAGTGTGTTATAATGTTTAAGGCAGAAGAAGACTAGAAGTATAGAGGCTGAAAATCATAATTCATATCATCTTCTTTCTCTCTCCTATTCAAACTTTCTGTTCCAATCACCATCGGAAAGCATACGATCCACCGCCATGGCTACATAATCACTGACCCATTTCACAAATAATACCCTTCTTTCCTTCTCTCCCATGGCGTATCACAATCACCTCTCACAGGACCTTCCTCTTCACTTTTCTGACCATCAACAACAGCACCACCACCACCACCACCAAAATCAACCTCTCTCTGATACTTCTTCTCTTCGTAACATTTTGCCCGACCAGCTTCCCGGCCCCCACTCCTCGCCGGACCCCAAGTCTCACCAACCCCATCATCATCACCACCATCATCCGCTTCAGACCGCACCCAATTGGCTAAACAACGCACTTCTCCGTAACCAAAACCCCCATTCTCACTACTCTACCGACACACCCACCACCGCCGCCGCTAATACTAATTTCCTTAACCTTCACACCACTGCATCCGATTCCACCGTTTCTCACTCCTCTAACCAATGGCTCTCCCGTCCGATTCTCCACCGTAACCACAGCGATGTCATCGACGATGTCGCCGCCGCCGCTGCCGGTGATGCTATGATCGGTGCTGCCACCGCCACGCTCTCTCATGATTCTGGTGACTTGAAGAACGATGCTAATAGCGGCGATGGATTGAACAAGAGTGAGGGTATGGTGATGGAACCTGGTGCCGGTGGAGAAGGGGTTTTGAATTGGCAACATGCTCGTTATAAAGCTGAGATTCTCGCTCATCCTCTTTACGAGCAGCTTCTCTCCGCCCATGTTGCTTGCCTTCGCATCGCGACACCGGTCGACCAGTTACCGAGGATCGACGCTCAGCTCGCTCAGTCTCAGAATGTCGTCGCTAAGTACTCCGCCTTGGGCCACTCCGCTCCGCCGTCCATGGTTGGTGACGACAAAGAGCTCGATCAGTTCATGACACATTATGTTCTTTTGCTGTGTTCATTCAAAGAACAACTCCAACAACATGTTCGAGTCCATGCAATGGAAGCAGTAATGGCTTGCTGGGACATTGAGCAGTCCCTACAAAGTTTAACAGGAGTTTCGCCCGGTGAAGGTACAGGAGCAACAATGTCGGACGACGACGACGACCAGGTAGATAGCGATGCAAATCTGTTTGATGGAAGTTTAGAGGGTCCAGACACCATGGGATTTGGCCCTCTTATTCCCACAGAGAGTGAGAGATCCTTAATGGAGAGGGTCAGGCAAGAACTGAAGCATGAACTAAAAGCGGGCTACAAGGAGAAAATTGTGGATATAAGGGAAGAAATTCTGAGAAAGAGGAGAGCTGGAAAACTCCCTGGTGACACCACCTCTGTCCTCAAACAATGGTGGCAATCACATTCAAAGTGGCCTTATCCTACAGAGGAAGACAAGGCAAGATTAGTGCAAGAAACTGGCTTACAACTGAAACAGATAAACAATTGGTTCATTAACCAGAGGAAGAGAAACTGGCACAGCAATCCTTCAAGTTCTACAAACTTGAAAAGCAAACGCAAGAGAAGTAATGCAGGTGAAAACAGCAGCGATCGTTTCAAATGA 1641 48.2 MAYHNHLSQDLPLHFSDHQQQHHHHHHQNQPLSDTSSLRNILPDQLPGPHSSPDPKSHQPHHHHHHHPLQTAPNWLNNALLRNQNPHSHYSTDTPTTAAANTNFLNLHTTASDSTVSHSSNQWLSRPILHRNHSDVIDDVAAAAAGDAMIGAATATLSHDSGDLKNDANSGDGLNKSEGMVMEPGAGGEGVLNWQHARYKAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSALGHSAPPSMVGDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWDIEQSLQSLTGVSPGEGTGATMSDDDDDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKAGYKEKIVDIREEILRKRRAGKLPGDTTSVLKQWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSSTNLKSKRKRSNAGENSSDRFK 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 77104003 77108065 - XM_039041940.1 Bhi09g02967 45584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02967 475 Pfam KNOX2 domain 258 308 IPR005541 GO:0003677|GO:0005634
Bhi09g02967 475 SMART KNOX2_2 254 309 IPR005541 GO:0003677|GO:0005634
Bhi09g02967 475 ProSiteProfiles ELK domain profile. 366 386 IPR005539 GO:0003677
Bhi09g02967 475 CDD homeodomain 389 450 IPR001356 GO:0003677
Bhi09g02967 475 MobiDBLite consensus disorder prediction 443 475 - -
Bhi09g02967 475 ProSiteProfiles 'Homeobox' domain profile. 386 449 IPR001356 GO:0003677
Bhi09g02967 475 Pfam Homeobox KN domain 406 445 IPR008422 GO:0003677|GO:0006355
Bhi09g02967 475 Gene3D - 387 448 - -
Bhi09g02967 475 MobiDBLite consensus disorder prediction 443 460 - -
Bhi09g02967 475 MobiDBLite consensus disorder prediction 17 71 - -
Bhi09g02967 475 SUPERFAMILY Homeodomain-like 388 452 IPR009057 -
Bhi09g02967 475 MobiDBLite consensus disorder prediction 308 327 - -
Bhi09g02967 475 MobiDBLite consensus disorder prediction 461 475 - -
Bhi09g02967 475 PANTHER CLASS II KNOTTED-LIKE HOMEOBOX PROTEIN 60 465 - -
Bhi09g02967 475 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 60 465 - -
Bhi09g02967 475 SMART HOX_1 388 453 IPR001356 GO:0003677
Bhi09g02967 475 Pfam ELK domain 366 387 IPR005539 GO:0003677
Bhi09g02967 475 SMART KNOX1_2 197 241 IPR005540 GO:0003677|GO:0005634
Bhi09g02967 475 Pfam KNOX1 domain 199 240 IPR005540 GO:0003677|GO:0005634
Bhi09g02967 475 SMART ELK_2 366 387 IPR005539 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02965 Bhi-Chr9:77103515 Bhi09g02967 Bhi-Chr9:77104003 0 dispersed
Bhi09g02967 Bhi-Chr9:77104003 Bhi12g00327 Bhi-Chr12:9196888 1.83E-133 dispersed
Bhi09g02966 Bhi-Chr9:77103515 Bhi09g02967 Bhi-Chr9:77104003 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1993 PF03791 KNOX2 2.00E-21 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02967 - - bhj:120085761 894.419