Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02972 GGAACATGAAAGCGAAACAAGCAGTCCCTCCCTTTTATTACAAAACCATCTCTCCTCTCACCCATTTCTGAAACTCATCAGATTTCGCCATTTTCACCCTAGCAAGAAGAAGAAGAAGAAGAAGAAGAAGACCAATCAATGGCGATGCCCCATCTTGGTTGGTGTTATACAGCCATCGGTCCCCCTTTTTTTTTCTCCATTTCTCCATCACTTCCTCTTTCGTCTCCATCAATCTCTCCCATTTCTTCTTCTTCAACCGCCGCTCATTCACTCGGTAGGTACATTAATTACATTAATTACACATTGCAATCTAATTTCGTTTTCTATATTCTATCTTCCGCACCAAGAAACATCCCATTCTCAAACCCCTAATCCTTCTTTTCCCCTAATTTGAAATTTCTGACATAAATTCGTTTGTTCTATTCTCCGAATTGCTCATTAACGTCTCATTTAAATTTTGAGGTGAAGAACATCATCGACATCACAATCGTTAGATGGAAGCTCGTACGAAAATGGCAGTGGCTGTAGCTGTATTTTGCTCTTCCCTGCTTATCGCCGCTTTGTTTTCATTGCTCTGGTTGTGGATTCACCGGAAAAGGAGAAACGCTGGTAAAAGCAAAGGCAAAGATGCGAAGAAGGGGATTGGATTAACTCCATTTGTGATTGGGGAGAAGGGACGTTTGTCATTGATTGATTTCAAAGTACTGGAGAAAGCTACTGGGAATTTTGAGGAGGGCAATGTATTGGGTGAAGGTGGATTTGGGAGAGTTTATAAGGCTTTGTTGGATGATAATTTGGTTGTGGCTGTGAAGAAGATTGATTGCAGTGGCTCCCAAGCTGACAGAGAATTTGAGAACGAAGTTAATATATTGAGCAGTATTCATCATCCGAATATTATTTGCCAATTGGGATGTAGCAGTGAGGGAGACACAAAGTTGATTGTTTATGAGCTCATGGAGAATGGATCTCTAGAAACTCAACTGCATGGGCCCTCCTCTCGTGGTTCGGCCTTAAGTTGGCACATGCGGATGAAGACTGCTCTCGATGTTGCAAGAGGATTAGAATACCTTCATGAGCATTGCAAGCCTTCAGTTATTCATAGAGATTTGAAGACTTCCAACATCCTTCTCGATTCCAACTTCAACGCTAAGATAGTTTATGAATCTAACACACGAAGATTAACAGAAAAAAGTGATGTGTATACATTTGGAATTGTGGTACTGGAGCTTCTGCTAGGAACAAGGCCAATGGAGAAACTGCCAACACCACAATCCCAATCTTTCATCACATGGGCAATGCCTCAACTCACAGACAGATCAAAGTTACCAAACATAGTAGATCCTGTTATTAGAAATACTATGGATCTCAAGCACTTATATCAGGTTGCTGCAATGGCTGTTTTGTGTGTACAAGGAAAACCAAGCTACAGACCTTTAATTAAAGATGTTCTACACTCGCTGGTTCCCCTTGTTCCCATGGACCTTGGAGGTACCCTAAGATTTAACCCACACCAATGATCACCACTTTTTTTTTTGTTCATTTTTTTTCAATTTATGTAAAAAGATATGGACTTTTTGAGGTCATTTCACTTGATAATTATTCTGTATTTGAGATTTTCTTAAATGCAGTATCAATGAATTAAATAAAAATACAAAGAATCAAATTGATA 1669 39.6 MEARTKMAVAVAVFCSSLLIAALFSLLWLWIHRKRRNAGKSKGKDAKKGIGLTPFVIGEKGRLSLIDFKVLEKATGNFEEGNVLGEGGFGRVYKALLDDNLVVAVKKIDCSGSQADREFENEVNILSSIHHPNIICQLGCSSEGDTKLIVYELMENGSLETQLHGPSSRGSALSWHMRMKTALDVARGLEYLHEHCKPSVIHRDLKTSNILLDSNFNAKIVYESNTRRLTEKSDVYTFGIVVLELLLGTRPMEKLPTPQSQSFITWAMPQLTDRSKLPNIVDPVIRNTMDLKHLYQVAAMAVLCVQGKPSYRPLIKDVLHSLVPLVPMDLGGTLRFNPHQ 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 77244854 77251033 + XM_039040726.1 Bhi09g02972 45589

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02972 340 Gene3D Transferase(Phosphotransferase) domain 1 223 328 - -
Bhi09g02972 340 PANTHER OS01G0750732 PROTEIN 228 337 - -
Bhi09g02972 340 PANTHER OS01G0750732 PROTEIN 5 220 - -
Bhi09g02972 340 SUPERFAMILY Protein kinase-like (PK-like) 64 322 IPR011009 -
Bhi09g02972 340 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Bhi09g02972 340 ProSiteProfiles Protein kinase domain profile. 78 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g02972 340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Bhi09g02972 340 PANTHER BNAA04G14780D PROTEIN 5 220 - -
Bhi09g02972 340 PANTHER BNAA04G14780D PROTEIN 228 337 - -
Bhi09g02972 340 Pfam Protein tyrosine and serine/threonine kinase 81 220 IPR001245 GO:0004672|GO:0006468
Bhi09g02972 340 Gene3D Transferase(Phosphotransferase) domain 1 154 222 - -
Bhi09g02972 340 Gene3D Phosphorylase Kinase; domain 1 46 153 - -
Bhi09g02972 340 SMART serkin_6 78 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02972 - - - csv:101214742 545.043
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bhi04g00032 Bhi09g02972 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02972 Bhi-Chr9:77244854 Bhi11g01264 Bhi-Chr11:37345347 8.34E-65 dispersed
Bhi04g00032 Bhi-Chr4:785664 Bhi09g02972 Bhi-Chr9:77244854 4.66E-144 wgd
Bhi09g00515 Bhi-Chr9:10867663 Bhi09g02972 Bhi-Chr9:77244854 4.04E-132 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g535 . . Bda01g00757 . . . . . . . . . . . . . . Bhi04g00032 . . . . . Lcy13g1813 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bhi09g02972 . . . . . . . . . . . . . . . . Cme07g00099
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003093 2 2 1 1 0 2 1 2 2 2 2 2 2 2 0 2 3 0 2 1 2 2 0 0 0 1 1 2 1 2 42
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88172 PF07714 PK_Tyr_Ser-Thr 4.90E-29 CL0016 Bhi PK