Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g02982 CAAGATCCAAACCATTATCCATTTATATTCAAAACGAATCAAATTCCATTTTCCCAACCAAAAAAAAAAAGGAAAAAAAAAATCTCAGCTCTTTTCTTCTAAGTATTTCTCTCCCTCAATGGAATCCCAAACCGACCGGAACCCATTTTCCGGCGACGGCGAGGAAGACGATGAGAAAGAAATTACCGGCGAATTTTCCGATGACCGGAGCAGCCTTTTGGAACTTCAACTCTCATCAAATTCTCCAGATTCAACAACAAAACCCAGAATTTTCTCATGTAATTATTGCCAAAGAAAATTCTTCAGCTCCCAAGCTTTAGGAGGCCATCAAAATGCCCATAAAAGAGAGAGGACTTTAGCCAAACGAGTTCAAAAATTCGACTGGGCGGCGGCGGCAGCGGCGTCGATTCCACTCCACGGCGGCGCGTTTGATCGAAGGTCGTCGTTGGGAATTCACGCGCACTCTCAGCAAATTCAGAAGCCAGCTGTAGGGTTGTTTTTTGGTGGGGCAGGGCCTGCTAGTTCTCAATTGTGGCCTAGGCCGTTGTTTATGGGTCAACAACCGGCGGTGGGGCGGTTGACTGCGGAGGTGGGTGGCCGGAATTTTGGAAGATTTGATGAGGTGGCAGGGTGGGCGGCGATTGGAAGCTCAAACGCCGGTAATGAGAGTAATAATAATGTTAATATTGTTCATTCTCAGACCAAACAGGATCAGGATCAGTCCAATTTTCTTGATTTGTCTCTTAAACTCTAACATTAAACCAAATTATTATCATTATTACTATTATTATTATTCACTTATCCTAATTATTAGGTCAATTAAATCGCTCCTTTTTTTTTTTATCT 846 42.91 MESQTDRNPFSGDGEEDDEKEITGEFSDDRSSLLELQLSSNSPDSTTKPRIFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRVQKFDWAAAAAASIPLHGGAFDRRSSLGIHAHSQQIQKPAVGLFFGGAGPASSQLWPRPLFMGQQPAVGRLTAEVGGRNFGRFDEVAGWAAIGSSNAGNESNNNVNIVHSQTKQDQDQSNFLDLSLKL 211
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 77386712 77387557 - XM_039043530.1 Bhi09g02982 45599

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g02982 211 Gene3D Classic Zinc Finger 28 95 - -
Bhi09g02982 211 ProSiteProfiles Zinc finger C2H2 type domain profile. 52 79 IPR013087 -
Bhi09g02982 211 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 39 211 IPR044246 GO:0009788
Bhi09g02982 211 ProSitePatterns Zinc finger C2H2 type domain signature. 54 74 IPR013087 -
Bhi09g02982 211 MobiDBLite consensus disorder prediction 1 31 - -
Bhi09g02982 211 SUPERFAMILY beta-beta-alpha zinc fingers 48 79 IPR036236 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g02982 - - - bhj:120086743 396.741
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bhi04g00040 Bhi09g02982 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02982 Bhi-Chr9:77386712 Bhi01g03630 Bhi-Chr1:91939389 1.79E-30 dispersed
Bhi01g01739 Bhi-Chr1:36511621 Bhi09g02982 Bhi-Chr9:77386712 9.70E-24 transposed
Bhi11g00145 Bhi-Chr11:3319815 Bhi09g02982 Bhi-Chr9:77386712 1.78E-07 transposed
Bhi11g02809 Bhi-Chr11:75350335 Bhi09g02982 Bhi-Chr9:77386712 8.26E-17 transposed
Bhi04g00040 Bhi-Chr4:986932 Bhi09g02982 Bhi-Chr9:77386712 1.43E-23 wgd
Bhi09g00520 Bhi-Chr9:10980069 Bhi09g02982 Bhi-Chr9:77386712 4.67E-19 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g525 . . Bda01g00760 . . Bpe02g00545 . . . . . . . . Sed11g1150 . . Bhi04g00040 Tan02g2755 Cmetu03g0839 . Hepe10g0223 . Lcy13g1820 . . . . . . . . . . . . . . . . . . . . . . . Sed06g2059 . . . . . . . . Bhi09g02982 Tan01g3585 Cmetu07g2142 . Hepe01g1980 Mch11g0516 . . . . . . . . . . . Cme07g00107
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012613 0 1 0 0 0 1 2 1 1 1 1 1 2 1 1 2 1 0 2 1 1 1 1 1 1 1 1 2 1 0 29
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1995 None None None None Bhi TF