Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03020 CGAAACAGGTGGAGACTAGAAAACGACTGTATTTATACCATTGCTGCAGTGGAGCTTGCTTTTTTCGATTTCGGTTTCCATTTCAGAAGATTACACACACTTTTCTTCTACCATCGCTGTTTGTTTCTAGCAATTTCTCATTGAAATGGGTATATACCTCAGCAATCCCAAAACTGAGAAGTCCTCTGAAGATGGTGAGAATAGATGGCTTAGATATGGACTATCGTCTATGCAAGGATGGCGTGCTACAATGGAAGATGCTCATGCTGCAGTTCCTGATCTGGATTCCTGCACTTCCTTCTTTGGTGTTTATGATGGCCATGGTGGTAAGGTGGTTGCAAAGTTTTGTGCCAAGTACCTACATCAGCAAGTGAAGAAAAATGAAACTTGTGCGGCTGGAGATTTAGGATCTTCTGTGCAGAAAGCATTCTTCAGAATGGATGAAATGATGCGTGGACAAAGAGGTTGGAGAGAATTAGCTGTTTTGGGTGATAGATTGAACAAGTTCACTGGCATGATAGAAGGGTTAATCTGGTCCCCGAAAAGCAGTGATGCAAATGACCTGGCTGATGATTGGGCTTTTGAGGAGGGCCCGCACTCTGATTTTACTGGTCCAACTTCCGGGTGTACAGCTTGTGTTGCAATTATTAGAAACAACAAACTTGTTGTTGCAAATGCTGGTGATTCTCGTTGTGTGCTATCAAGAAAAGGCCAGGCCCACAGTCTTTCTAGAGATCACAAGCCTGATCTTGAGGCTGAGAAGGATAGAATTCTGAAAGCTGGCGGTTTTATTCATGCTGGACGAGTCAATGGTAGCTTGAACCTTGCCAGAGCTATTGGTGACATGGAATTTAAGCAGAACAAATTTTTGCCTGCTGAAAAGCAAATTATTACTGCAAATCCTGATGTGACCACTGTCGAGCTTTGCGACGATGATGAGTTTATTGTGATAGCTTGTGATGGTATATGGGATTGCATGTCTAACCAGCAACTGGTAGATTTTATACATGAACAGCTAAAATCAGAAAGTAAACTCTCCGTGGTTGTTGAGAGAGTACTTGATAGGTGTTTGGCACCTTCCACAGCTGTTGGCGAGGGATGTGATAACATGACCATGATTTTGGTGCAGTTTAAGAAAGATATTCAATCAAACTCCTCTCTGGATGAGCAAACTTCAACTGTCGCCACCACCTGTGCCGAATCAGACAGCACCGAATCGATGCAAAAAGATGAATTGAGCTAG 1243 42.96 MGIYLSNPKTEKSSEDGENRWLRYGLSSMQGWRATMEDAHAAVPDLDSCTSFFGVYDGHGGKVVAKFCAKYLHQQVKKNETCAAGDLGSSVQKAFFRMDEMMRGQRGWRELAVLGDRLNKFTGMIEGLIWSPKSSDANDLADDWAFEEGPHSDFTGPTSGCTACVAIIRNNKLVVANAGDSRCVLSRKGQAHSLSRDHKPDLEAEKDRILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQIITANPDVTTVELCDDDEFIVIACDGIWDCMSNQQLVDFIHEQLKSESKLSVVVERVLDRCLAPSTAVGEGCDNMTMILVQFKKDIQSNSSLDEQTSTVATTCAESDSTESMQKDELS 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 78210122 78218956 - XM_039043776.1 Bhi09g03020 45637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03020 365 Pfam Protein phosphatase 2C 155 313 IPR001932 -
Bhi09g03020 365 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Bhi09g03020 365 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Bhi09g03020 365 Gene3D - 1 330 IPR036457 -
Bhi09g03020 365 PANTHER PROTEIN PHOSPHATASE 2C 1 342 IPR015655 GO:0004722|GO:0006470
Bhi09g03020 365 SMART PP2C_4 13 327 IPR001932 -
Bhi09g03020 365 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Bhi09g03020 365 CDD PP2Cc 23 329 IPR001932 -
Bhi09g03020 365 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 342 - -
Bhi09g03020 365 MobiDBLite consensus disorder prediction 344 365 - -
Bhi09g03020 365 SUPERFAMILY PP2C-like 3 330 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g03020 Bhi-Chr9:78210122 Bhi09g03022 Bhi-Chr9:78210122 0 dispersed
Bhi09g03019 Bhi-Chr9:78209809 Bhi09g03020 Bhi-Chr9:78210122 0 tandem
Bhi09g03020 Bhi-Chr9:78210122 Bhi09g03021 Bhi-Chr9:78210122 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03020 K17499 - csv:101211604 688.337