Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03025 ATAACGGCAACAATAAGGGTTTCTTTGGAGCTCGCGTTTCTCCTCACTCACCCCATTTTCTCTTTGCAGCTGCGAAGAGATACACAGAGAGAGACGCAGGTAGAGATAGAATCCCACTCTGTCTCTATCTGTCGAAAATAATCTCCAAAATCCAACATCCTCCATTCCAATCCTCTCTTTTTTCTCCGCCTCCATCGATTATCTCTCTCTTTCTCCCTCTAAATCTACCCTCTCTCTCTCTCTCTCTCTCTCTCCTCATCCCTCTCCGTGCCGCTCAACAACGGATTGCATCGGTGGAGTTATGCAGGCAGATCAGACGGTGATAAGTTTGAGACCAGGTGGTGGCGGTGGCCTTCGTGGAAGCAGATTTGTTACACCTCGCTTCGATTCCTCCTCCGCCGACTCTTCTTCGCTTCGTCCACATGGCGGCGTTGCTTCAATCCTCAAGACTGGCGATCTACGGTTTGAAGGTCGTGAGCGGATCCAATACACTCGAGACCAGCTTCTGCAGCTTAGGGAGGTTGCAATAGTCCCTGAGGAAATCTTGAAAGTCAAACTAGAAGTTGAGTCTGAGATAGTTGGGGAGGAGCAAACTTGGGCCCGTGCTGAAAGCAACCAATCACAATCTCAAAGCCGTTATTTTGAGCCAGACAATCGAGATTGGCGTGGTCGATCTGGACAGCTACCCGGCTCCACAGAGGAAGGATCTTGGGAGGCAAATAAGGATTTGTCTGGACAATCTGAGTTGAGGTTCCCAGACTCAAATAATAGGGTTCAAGTTTCTGGTAACCAAGGGGTCGGCACCACACCTGCTCTTATCAAGGCTGAAGTTCCTTGGTCAGTTAGAAGAGGTAATATCTCAGAAAAGGAACGAGTTTTGAAGACAGTTAAAGGTATACTTAATAAATTGACTCCAGAAAAGTTTGATGTACTCAAAGGTCAATTGATTGATTCTGGAATTACGTCCGCTGATATTTTGAAGGATGTTATATCACTTATATTTGAGAAGGCTGTGTTTGAGCCCACATTTTGCCCTATGTATGCACTTTTGTGCTCTGACCTTAACGAGAAGCTTCCTTCATTTCATTCTGATGTGCCTGGAGAGAAAGATATCACTTTTAAACGAGTTCTCTTAAATATTTGCCAAGAGGCATTTGAAGGTGCTGATAACCTGAGGGCAGAAATCAGGCAGATGACTAGTCCTGAGCAGGAAATGGAAAGAAGAGATAAAGAAAGAATGGTTAAGCTTCGAACTCTAGGAAACATTCGCCTGATAGGTGAGCTTCTAAAACAGAAGATGGTGCCTGAAAAGATTGTTCACCATATTGTTCTGGAGCTGTTGGGGCCTGATCCTAAAATATGCCCTGCCGAGGAGAATGTTGAGGCTATTAGTCAGTTTTTTAACACAATAGGTAAGCAACTGGATGAGAGTCCAAAATCTCGACGGGTCAATGATCTATATTTCAGCCGGTTGAAGGAGCTCACCGCAAACACCCAACTAGCACCTAGGTTGAGATTTATGGTTCGTGATGTTCTTGATTTACGGGCCAATAACTGGGTCCCTAGACGTGAAGAGGTTAAAGCAAAAACCATCACTGAAATTCATTCAGAGGCTGAAAAGAATCTAGGGCTCCGTCCAGGTTCAATGGCAATGATGAGAAATGGCCGTAATGCTGAGGCACTTGGGGGATTAAGTCCTGGTGGTTTTCCTGTTGCCCGACCTGGCTTTGGAGGTATGATGCCTGGAATGCCTGGAGCCAGGAAAATGCCTGGTATGCCTGGACTTGAGTCAGACAATTGGGAAGTTCCTAGATCCCGATCAATGCCAAGGGGTGAGAGCGGAGGTTCTGTGCGTGCCCAATCATCACTAATGGGCAAAACGCCTTCCCTTAATTCAAAATATTTACCTCAGGGAAGTGGTGGTGTCATAACCGGGAAAACAAGTGCCTTTCTACAGGGTAGTGCTGCTGCATCTTCTGCCCGACCAAGTTCCATGCCTGGAACCCAGCCTGCCGCTCACAACCCTAAACCAGTTGCTCCCGTTGCACCAGTCATATCTTCTCCTTCGAAGCCTGCAGCTCCTGCTGCATCCAATGCAGATGATCTTCAAAAGAAAACCAAGGATCTTCAAAAGAAAACCATTTTGCTGCTCGAGGAATACTTCAGTGTACGGATTCTTGATGAAGCTCTACAGTGTGTAGTGGAGCTTAAATCCCCAGCTTATCACCCTGAGGTTGTTAAAGAATCCCTTACCATGGCACTTGAGAAGATTCCACCATGCGTAGACCCAGTAGTTAAGCTTCTTGAGCACTTGTTTCACAAGAATGTCTTGACCGCAAAGGATATAGGTACCGGGTGCCTTCTATATGGGTCATTGATGGATGATACAGGCATTGATCTGCCAAAAGCACCAAACAATTTCGGCGAGATTCTTGGGAAGTTGATTCTGATTGGGGGTCTGAATTTCACGGTTGTGAAGGAGATTCTCAAGAATCTGGAAAATAATTACTTCCAGAAATCCATTTTTGGTGGTGCTATGAAGATACTCAACTCTAGCCCGTCTGGAGAAGGAATTCTGGCAACTCAAAGCGTTGAGATCCAGGCATGTGAGACTTTACTTGCGTGAATTGAGTCATGTGGGATTGATTTCCCATTACGTTTTTGATCAAAAGATTTTTCATTTCATGTTTACGAACGATCGCGAAAAGACAAATAACTGATCATTTATATTGAGTTGTATATTTCTTTCTTTTCTTCCTTTTTTCTTTGGGGGGTTCTATTAAGTATAGACTTTGTTGAGTAATTAGGAGCAAAATGTCTTGCATTTCTCTCGTCTGCTCATCGAAGACGTCTTGGGTGGCTTGAGAATAACAGGAATTGATGATGGGTCAAGTTGTTACATTAGATTTTGAATTTATATTATGATGTATCAAAATACATTGCTTGTTGTACTTTAGCCCTTATGTGGCATCTGAGTTTTTCCCTCAATAATGTCTGCTTTCGTCTTCCCCAA 3013 44.51 MQADQTVISLRPGGGGGLRGSRFVTPRFDSSSADSSSLRPHGGVASILKTGDLRFEGRERIQYTRDQLLQLREVAIVPEEILKVKLEVESEIVGEEQTWARAESNQSQSQSRYFEPDNRDWRGRSGQLPGSTEEGSWEANKDLSGQSELRFPDSNNRVQVSGNQGVGTTPALIKAEVPWSVRRGNISEKERVLKTVKGILNKLTPEKFDVLKGQLIDSGITSADILKDVISLIFEKAVFEPTFCPMYALLCSDLNEKLPSFHSDVPGEKDITFKRVLLNICQEAFEGADNLRAEIRQMTSPEQEMERRDKERMVKLRTLGNIRLIGELLKQKMVPEKIVHHIVLELLGPDPKICPAEENVEAISQFFNTIGKQLDESPKSRRVNDLYFSRLKELTANTQLAPRLRFMVRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGSMAMMRNGRNAEALGGLSPGGFPVARPGFGGMMPGMPGARKMPGMPGLESDNWEVPRSRSMPRGESGGSVRAQSSLMGKTPSLNSKYLPQGSGGVITGKTSAFLQGSAAASSARPSSMPGTQPAAHNPKPVAPVAPVISSPSKPAAPAASNADDLQKKTKDLQKKTILLLEEYFSVRILDEALQCVVELKSPAYHPEVVKESLTMALEKIPPCVDPVVKLLEHLFHKNVLTAKDIGTGCLLYGSLMDDTGIDLPKAPNNFGEILGKLILIGGLNFTVVKEILKNLENNYFQKSIFGGAMKILNSSPSGEGILATQSVEIQACETLLA 774
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 78241012 78246576 - XM_039041742.1 Bhi09g03025 45642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03025 774 SMART ma3_7 609 721 IPR003891 -
Bhi09g03025 774 SUPERFAMILY ARM repeat 606 760 IPR016024 -
Bhi09g03025 774 MobiDBLite consensus disorder prediction 25 39 - -
Bhi09g03025 774 MobiDBLite consensus disorder prediction 553 570 - -
Bhi09g03025 774 MobiDBLite consensus disorder prediction 1 43 - -
Bhi09g03025 774 Pfam MA3 domain 609 720 IPR003891 -
Bhi09g03025 774 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 1 773 IPR045208 GO:0003743
Bhi09g03025 774 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 1 773 - -
Bhi09g03025 774 MobiDBLite consensus disorder prediction 553 604 - -
Bhi09g03025 774 ProSiteProfiles MI domain profile. 608 730 IPR003891 -
Bhi09g03025 774 SMART if4_15 193 418 IPR003890 GO:0003723|GO:0005515
Bhi09g03025 774 Gene3D - 184 419 - -
Bhi09g03025 774 SUPERFAMILY ARM repeat 186 421 IPR016024 -
Bhi09g03025 774 MobiDBLite consensus disorder prediction 146 165 - -
Bhi09g03025 774 Gene3D - 604 762 - -
Bhi09g03025 774 MobiDBLite consensus disorder prediction 499 532 - -
Bhi09g03025 774 MobiDBLite consensus disorder prediction 99 114 - -
Bhi09g03025 774 MobiDBLite consensus disorder prediction 99 141 - -
Bhi09g03025 774 Pfam MIF4G domain 193 418 IPR003890 GO:0003723|GO:0005515
Bhi09g03025 774 MobiDBLite consensus disorder prediction 514 532 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g03025 Bhi-Chr9:78241012 Bhi12g01433 Bhi-Chr12:46279398 8.81E-59 dispersed
Bhi09g03025 Bhi-Chr9:78241012 Bhi09g03026 Bhi-Chr9:78241012 0 tandem
Bhi08g01687 Bhi-Chr8:47784628 Bhi09g03025 Bhi-Chr9:78241012 9.79E-07 transposed
Bhi02g00861 Bhi-Chr2:18230237 Bhi09g03025 Bhi-Chr9:78241012 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03025 K03260 - csv:101211356 1258.05