Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03045 TCCTTATTTAAAAAGGGCTTAAGCGTCCTTCCACTTTCTCCATATCAACAAAATAAATTATTAAAAACAAAAACAAAAAATCTCAATTCTCAATAGAGCTCTCTGAGCTCTCTCAATTCTCATCCATGGCGTCTCTTTCTTCAATGCTTTTCTTTGCTTTTTCTTTCCTTTTCTTTCAATCTTTCGCCGGAAAAATCTCGCCGGACTCCCACCACCTCACCGTCGAACTCGCCGGCCTTTTCCCCTCCGCCTCCTGCACCCGCCGCTCCCCCCAAGCCCATATTTCAAGTCAGAGAGAGCAGTCGTCACTGGAGGTAATTCACCGGCACGGCCCATGCGGCGTCGGAGATTCAAAATCTCCAACGGCCGCGGAAATGTTCGTGCAAGATCAGGCTCGAGTGGATTTCATCAACTCTAAATTCTCAGGGAAGTTCAAAGCCATGGACAGTTTACGGCCGTCGAAGGCCACAAAAATTCCGGCAAAGTCTGGTGCCACAATCGGCTCCGGCAACTACATAGTGAACGTGGGTCTAGGGACGCCGAAGAAGTACCTGTCGCTTATATTTGACACCGGCAGCGATCTGACGTGGACTCAATGCGAGCCTTGTGCTAGATATTGCTACGACCAAAAGGACCCTGTTTTCGCTCCTTCTCAATCCACCACTTATTCCAATATCACTTGTTCTTCCCCTGACTGCGCTCAGCTTGAATCAGGCACTGGGAATCAGCCAGGTTGCTCCGCCGCGAAATCCTGCATTTACGGAATACAATACGGCGATCAATCCTTCTCCGTCGGATATTTCGCTAAAGAAACTCTAACCTTAACCTCCACCGACGTTATCGACAATTTCCTCTTCGGTTGCGGCCAAAACAACCGTGGACTCTTCGGCAGCGCCGCCGGTCTCATCGGCCTTGGCCAGGACAAGATTTCCATCGTCAAACAGACAGCCCAAAAGTACGGCCAGATCTTCTCCTACTGCCTCCCTAAAACCTCCAGTTCCACTGGCTACCTAACATTCGGCAGTGGTGGCGGTGGCGGCGCTCTGAAATACACGCCGATCATAGAAGCACACGGCGTCGCGAATTTCTACGGCCTCAACATCGTAGGTATGAAGGTCGGCGGAACACAGATCCCGATCTCGCCGTCGGTCTTCTCGACCTCCGGCGCGATCATCGATTCCGGCACGGTGATCACACGGCTGCCGCCGGATGCATACAGTGCCTTGAAATCGGCGTTTCAGAAAGGAATGGTGAGGTATCCGAAGGCGCCGGAGCTTTCGATTTTGGACACGTGTTACGATCTGAGCAAATACGCCGCCGTATCGATCCCGAAAGTGTCGTTTCTTTTCAAAGGAGGAACAGAGATCGATCTTGACGGCACCGGAATCTTGTACGGAGCATCGACGGATCAGGTGTGTTTGGCGTTCGCCGGTAATCGGGATCCGAGCACCATCGCCATTATTGGGAACGTGCAGCAGAAGACTTTGCAGGTGGTTTACGATGTCGGTGGGGGGAAGATTGGGTTTGGTTATAATGGTTGTTAGAGGGCTATAAATATAAAAGTAGGTTTGTTGTGGGGCTAATAATGAAAAGAAAAAAAAGAAAATTTCAAAGAAGAAAATTTGATGGGAAAAAGGAAAGAAATTTTATTTATAATAAGGGTCATGGAAATTGGATTACTGATGAATTGTGTGAAGAAATTTTAGAAGAAAAAAAGGTTGAAAGAAGTTTGCAAATGTATAGGATTCAAAGCCTTTTGTTTGTTGCTTCATATTTGTTGTTATTGTAATTTACAGCCCTTACAAGTTGTAATGTTTTCTTTTTTATTGTACGATAAGACAAAAAATTTCAATTGAAGTTTTAACTGGTTAAGACA 1876 47.01 MASLSSMLFFAFSFLFFQSFAGKISPDSHHLTVELAGLFPSASCTRRSPQAHISSQREQSSLEVIHRHGPCGVGDSKSPTAAEMFVQDQARVDFINSKFSGKFKAMDSLRPSKATKIPAKSGATIGSGNYIVNVGLGTPKKYLSLIFDTGSDLTWTQCEPCARYCYDQKDPVFAPSQSTTYSNITCSSPDCAQLESGTGNQPGCSAAKSCIYGIQYGDQSFSVGYFAKETLTLTSTDVIDNFLFGCGQNNRGLFGSAAGLIGLGQDKISIVKQTAQKYGQIFSYCLPKTSSSTGYLTFGSGGGGGALKYTPIIEAHGVANFYGLNIVGMKVGGTQIPISPSVFSTSGAIIDSGTVITRLPPDAYSALKSAFQKGMVRYPKAPELSILDTCYDLSKYAAVSIPKVSFLFKGGTEIDLDGTGILYGASTDQVCLAFAGNRDPSTIAIIGNVQQKTLQVVYDVGGGKIGFGYNGC 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 78812858 78817573 + XM_039041990.1 Bhi09g03045 45662

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03045 472 Gene3D Acid Proteases 104 300 IPR021109 -
Bhi09g03045 472 CDD cnd41_like 129 472 IPR033873 -
Bhi09g03045 472 Pfam Xylanase inhibitor C-terminal 322 467 IPR032799 -
Bhi09g03045 472 PRINTS Pepsin (A1) aspartic protease family signature 136 156 IPR001461 GO:0004190|GO:0006508
Bhi09g03045 472 PRINTS Pepsin (A1) aspartic protease family signature 348 359 IPR001461 GO:0004190|GO:0006508
Bhi09g03045 472 PRINTS Pepsin (A1) aspartic protease family signature 444 459 IPR001461 GO:0004190|GO:0006508
Bhi09g03045 472 PANTHER ASPARTYL PROTEASE AED1 50 472 - -
Bhi09g03045 472 SUPERFAMILY Acid proteases 124 472 IPR021109 -
Bhi09g03045 472 ProSiteProfiles Peptidase family A1 domain profile. 130 468 IPR033121 -
Bhi09g03045 472 PANTHER ASPARTYL PROTEASES 50 472 IPR001461 GO:0004190|GO:0006508
Bhi09g03045 472 Gene3D Acid Proteases 304 472 IPR021109 -
Bhi09g03045 472 Pfam Xylanase inhibitor N-terminal 130 300 IPR032861 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03045 - - - csv:101215397 807.749
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g00551 Bhi-Chr9:11684353 Bhi09g03045 Bhi-Chr9:78812858 1.88E-96 dispersed
Bhi09g03045 Bhi-Chr9:78812858 Bhi12g01149 Bhi-Chr12:34496609 3.87E-73 dispersed
Bhi09g03045 Bhi-Chr9:78812858 Bhi08g01215 Bhi-Chr8:37773783 4.69E-73 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g614 . . . Bda03g00113 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bpe04g00099 . . Sed05g1816 . . . . . . . . Bhi09g03045 Tan01g3527 Cmetu07g1748 . Hepe01g1942 Mch11g0478 . . . . . . . . . . . Cme07g00147
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005907 2 1 0 1 2 1 1 1 1 1 1 1 1 1 1 1 1 4 1 1 1 1 1 0 1 1 1 2 2 2 36