Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi09g03047 | CTCCCCTGTTTTTCCCATTCCTTGTCGACTCGTCGTTTTCTCCTTTAAACGCTCCTTAAGCTGTCCCCCCCTTTTCCTTTTCCTTTTTCCTTTCATTTCCATTTCCCCTTCTATTCTTCCTTCCTTCTTCTTCTCCTTCTTCTTCTTCGTCTTCCACCAGGTTCCCGTCAACTTGGGCAGTTGAGCACCTCCACGGGCATGCGAGGAACGGCTTATTCCTTCCACTTCTGTAACCATAGCTACTAGATATTGTTTGTTAGTTTTCTTTTTCCTTTCTTCCATTTTGACCGAAGAGATTGGAGCTGGGCATTTTCAGAGCCTACACGATATGGGCTATCTGAATTCAGTCTTATCTTGCTCGAGCCAGATTCATGCTGCCGAGGAGGCACCTGTAAGCGGCGGAGGATTAAGTCAGAATGGAAAGTTCAGCTACGGATATGCTAGCTCTCCAGGGAAGAGATCTTCGATGGAAGATTTTTATGAGACACGAATTGATGGTGTGGAAGGAGAAATAGTTGGTCTATTTGGTGTTTTCGATGGTCATGGTGGAGCACGAGCTGCGGAGTATGTTAAGCACAATCTTTTTAGTAATTTGATCAGCCATCCAAAGTTCATTTCAGATACCAAATCCGCTATAGCTGATGCATACAACCACACAGACACAGAATTTCTGAAGTCGGAAAATAACCAAAACAGAGATGCTGGATCAACTGCTTCCACTGCCATCCTAGTTGGGGACCGCTTACTTGTTGCAAATGTGGGCGATTCTAGAGCAGTTATTTGCCGGGGTGGCACTGCCATTGCTGTCTCTCGAGATCATAAGCCTGACCAAACTGATGAGCGACGACGGATTGAGGATGCAGGAGGATTTGTGATGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCACGTGCATTTGGTGATAGGTTGTTAAAGCAATATGTTGTTGCTGACCCTGAAATTCAGGAGGAAAAGATTGATAGCTCTCTCGAGTTTCTTATACTTGCCAGTGATGGACTGTGGGATGTCGTCTCTAATGAGGAAGCTGTTGCTATGACTAAACCAATTCAGGACCCCGAAGAGGCGGCGAAGAGGTTGATGCAAGAAGCATATCAGAGAGGCAGTGCAGATAACATTACTTGCGTCGTCGTTCGTTTCTTGGCAAATCAAGGAAGTCCCTCTCGTGGAACATCTGGGTAAGACAAACTGTTTTTCCTAGCTTTTCGCCCTCTGGTTCTGACTCGTCCAAAAGTCTCGACTGAACTGCAGTAACATTCGGTGGTTCATAGTCATAGGAAATTCCAGTAACATTGATGATTGTACTTATAAAAAAAAAAAAGAAATAGTAGACATAACGAGAAGTTGTCAGGTTGGTTTTTTGTGCAATACGGTGTCTGAGTTGCTGCCTACATAGTCTTTAGCTTCCTGCCTGGAGGTTGTAGAAATGTGCATTGGTTTAATTTGTAAAGAGTCTTTAATGGAATTGTTATTGTTTGTGTTGTCTTCAACCCTTCCTAAGGTGATTGGCTTTTTCTCC | 1547 | 44.28 | MGYLNSVLSCSSQIHAAEEAPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLISHPKFISDTKSAIADAYNHTDTEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGTAIAVSRDHKPDQTDERRRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDSSLEFLILASDGLWDVVSNEEAVAMTKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQGSPSRGTSG | 293 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 78889607 | 78894155 | + | XM_039043004.1 | Bhi09g03047 | 45664 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi09g03047 | 293 | Pfam | Protein phosphatase 2C | 63 | 273 | IPR001932 | - | |
| Bhi09g03047 | 293 | SMART | PP2C_SIG_2 | 45 | 280 | IPR001932 | - | |
| Bhi09g03047 | 293 | Gene3D | - | 26 | 285 | IPR036457 | - | |
| Bhi09g03047 | 293 | PANTHER | PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C | 3 | 287 | - | - | |
| Bhi09g03047 | 293 | ProSitePatterns | PPM-type phosphatase domain signature. | 65 | 73 | IPR000222 | GO:0043169 | |
| Bhi09g03047 | 293 | SMART | PP2C_4 | 24 | 278 | IPR001932 | - | |
| Bhi09g03047 | 293 | PANTHER | ALPHABET, ISOFORM E-RELATED | 3 | 287 | - | - | |
| Bhi09g03047 | 293 | SUPERFAMILY | PP2C-like | 28 | 280 | IPR036457 | - | |
| Bhi09g03047 | 293 | CDD | PP2Cc | 33 | 280 | IPR001932 | - | |
| Bhi09g03047 | 293 | ProSiteProfiles | PPM-type phosphatase domain profile. | 34 | 280 | IPR001932 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi01g01462 | Bhi-Chr1:29706750 | Bhi09g03047 | Bhi-Chr9:78889607 | 1.39E-95 | dispersed | |
| Bhi01g01463 | Bhi-Chr1:29706750 | Bhi09g03047 | Bhi-Chr9:78889607 | 2.25E-120 | dispersed | |
| Bhi04g01832 | Bhi-Chr4:45227193 | Bhi09g03047 | Bhi-Chr9:78889607 | 2.06E-129 | dispersed | |
| Bhi08g00470 | Bhi-Chr8:16355090 | Bhi09g03047 | Bhi-Chr9:78889607 | 9.38E-60 | dispersed | |
| Bhi09g03047 | Bhi-Chr9:78889607 | Bhi09g03444 | Bhi-Chr9:87052893 | 1.58E-66 | dispersed | |
| Bhi09g03337 | Bhi-Chr9:85524246 | Bhi09g03047 | Bhi-Chr9:78889607 | 9.23E-24 | dispersed | |
| Bhi09g03338 | Bhi-Chr9:85524737 | Bhi09g03047 | Bhi-Chr9:78889607 | 3.49E-24 | dispersed | |
| Bhi11g02810 | Bhi-Chr11:75383796 | Bhi09g03047 | Bhi-Chr9:78889607 | 3.29E-50 | dispersed | |
| Bhi12g01821 | Bhi-Chr12:58131783 | Bhi09g03047 | Bhi-Chr9:78889607 | 4.19E-19 | dispersed | |
| Bhi12g01972 | Bhi-Chr12:62369543 | Bhi09g03047 | Bhi-Chr9:78889607 | 2.63E-41 | dispersed | |
| Bhi12g01973 | Bhi-Chr12:62369543 | Bhi09g03047 | Bhi-Chr9:78889607 | 8.85E-42 | dispersed | |
| Bhi09g03047 | Bhi-Chr9:78889607 | Bhi09g03048 | Bhi-Chr9:78889773 | 0 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi09g03047 | K17506 | - | csv:101216117 | 579.711 |