Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03047 CTCCCCTGTTTTTCCCATTCCTTGTCGACTCGTCGTTTTCTCCTTTAAACGCTCCTTAAGCTGTCCCCCCCTTTTCCTTTTCCTTTTTCCTTTCATTTCCATTTCCCCTTCTATTCTTCCTTCCTTCTTCTTCTCCTTCTTCTTCTTCGTCTTCCACCAGGTTCCCGTCAACTTGGGCAGTTGAGCACCTCCACGGGCATGCGAGGAACGGCTTATTCCTTCCACTTCTGTAACCATAGCTACTAGATATTGTTTGTTAGTTTTCTTTTTCCTTTCTTCCATTTTGACCGAAGAGATTGGAGCTGGGCATTTTCAGAGCCTACACGATATGGGCTATCTGAATTCAGTCTTATCTTGCTCGAGCCAGATTCATGCTGCCGAGGAGGCACCTGTAAGCGGCGGAGGATTAAGTCAGAATGGAAAGTTCAGCTACGGATATGCTAGCTCTCCAGGGAAGAGATCTTCGATGGAAGATTTTTATGAGACACGAATTGATGGTGTGGAAGGAGAAATAGTTGGTCTATTTGGTGTTTTCGATGGTCATGGTGGAGCACGAGCTGCGGAGTATGTTAAGCACAATCTTTTTAGTAATTTGATCAGCCATCCAAAGTTCATTTCAGATACCAAATCCGCTATAGCTGATGCATACAACCACACAGACACAGAATTTCTGAAGTCGGAAAATAACCAAAACAGAGATGCTGGATCAACTGCTTCCACTGCCATCCTAGTTGGGGACCGCTTACTTGTTGCAAATGTGGGCGATTCTAGAGCAGTTATTTGCCGGGGTGGCACTGCCATTGCTGTCTCTCGAGATCATAAGCCTGACCAAACTGATGAGCGACGACGGATTGAGGATGCAGGAGGATTTGTGATGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCACGTGCATTTGGTGATAGGTTGTTAAAGCAATATGTTGTTGCTGACCCTGAAATTCAGGAGGAAAAGATTGATAGCTCTCTCGAGTTTCTTATACTTGCCAGTGATGGACTGTGGGATGTCGTCTCTAATGAGGAAGCTGTTGCTATGACTAAACCAATTCAGGACCCCGAAGAGGCGGCGAAGAGGTTGATGCAAGAAGCATATCAGAGAGGCAGTGCAGATAACATTACTTGCGTCGTCGTTCGTTTCTTGGCAAATCAAGGAAGTCCCTCTCGTGGAACATCTGGGTAAGACAAACTGTTTTTCCTAGCTTTTCGCCCTCTGGTTCTGACTCGTCCAAAAGTCTCGACTGAACTGCAGTAACATTCGGTGGTTCATAGTCATAGGAAATTCCAGTAACATTGATGATTGTACTTATAAAAAAAAAAAAGAAATAGTAGACATAACGAGAAGTTGTCAGGTTGGTTTTTTGTGCAATACGGTGTCTGAGTTGCTGCCTACATAGTCTTTAGCTTCCTGCCTGGAGGTTGTAGAAATGTGCATTGGTTTAATTTGTAAAGAGTCTTTAATGGAATTGTTATTGTTTGTGTTGTCTTCAACCCTTCCTAAGGTGATTGGCTTTTTCTCC 1547 44.28 MGYLNSVLSCSSQIHAAEEAPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLISHPKFISDTKSAIADAYNHTDTEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGTAIAVSRDHKPDQTDERRRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDSSLEFLILASDGLWDVVSNEEAVAMTKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQGSPSRGTSG 293
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 78889607 78894155 + XM_039043004.1 Bhi09g03047 45664
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03047 293 Pfam Protein phosphatase 2C 63 273 IPR001932 -
Bhi09g03047 293 SMART PP2C_SIG_2 45 280 IPR001932 -
Bhi09g03047 293 Gene3D - 26 285 IPR036457 -
Bhi09g03047 293 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 3 287 - -
Bhi09g03047 293 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Bhi09g03047 293 SMART PP2C_4 24 278 IPR001932 -
Bhi09g03047 293 PANTHER ALPHABET, ISOFORM E-RELATED 3 287 - -
Bhi09g03047 293 SUPERFAMILY PP2C-like 28 280 IPR036457 -
Bhi09g03047 293 CDD PP2Cc 33 280 IPR001932 -
Bhi09g03047 293 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01462 Bhi-Chr1:29706750 Bhi09g03047 Bhi-Chr9:78889607 1.39E-95 dispersed
Bhi01g01463 Bhi-Chr1:29706750 Bhi09g03047 Bhi-Chr9:78889607 2.25E-120 dispersed
Bhi04g01832 Bhi-Chr4:45227193 Bhi09g03047 Bhi-Chr9:78889607 2.06E-129 dispersed
Bhi08g00470 Bhi-Chr8:16355090 Bhi09g03047 Bhi-Chr9:78889607 9.38E-60 dispersed
Bhi09g03047 Bhi-Chr9:78889607 Bhi09g03444 Bhi-Chr9:87052893 1.58E-66 dispersed
Bhi09g03337 Bhi-Chr9:85524246 Bhi09g03047 Bhi-Chr9:78889607 9.23E-24 dispersed
Bhi09g03338 Bhi-Chr9:85524737 Bhi09g03047 Bhi-Chr9:78889607 3.49E-24 dispersed
Bhi11g02810 Bhi-Chr11:75383796 Bhi09g03047 Bhi-Chr9:78889607 3.29E-50 dispersed
Bhi12g01821 Bhi-Chr12:58131783 Bhi09g03047 Bhi-Chr9:78889607 4.19E-19 dispersed
Bhi12g01972 Bhi-Chr12:62369543 Bhi09g03047 Bhi-Chr9:78889607 2.63E-41 dispersed
Bhi12g01973 Bhi-Chr12:62369543 Bhi09g03047 Bhi-Chr9:78889607 8.85E-42 dispersed
Bhi09g03047 Bhi-Chr9:78889607 Bhi09g03048 Bhi-Chr9:78889773 0 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03047 K17506 - csv:101216117 579.711