Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03048 TCTCGTTCTAGAATCTCATCTCTCGAAGACTTCTTCTATTTATCTTCACTTTTGTTGGTCTTACTTTTTGATTCATTCGCCATATGGTTGTAATTATTGCTCCAATTATCATAATCGCTATCTGAAATTTTCGCCGATTTTTTTCGGTTTCACTTGGCGTAGCTTGTTCTTGGAAATAATAAGATCTGTGTTATTGCATCATTTTTGCGGCTTCTCTCTCTTTATTGTATAGTCTGAAATCGGAGATTTGTGGTTGTGGATATAATTGCAGGTTCCCGTCAACTTGGGCAGTTGAGCACCTCCACGGGCATGCGAGGAACGGCTTATTCCTTCCACTTCTGTAACCATAGCTACTAGATATTGTTTGTTAGTTTTCTTTTTCCTTTCTTCCATTTTGACCGAAGAGATTGGAGCTGGGCATTTTCAGAGCCTACACGATATGGGCTATCTGAATTCAGTCTTATCTTGCTCGAGCCAGATTCATGCTGCCGAGGAGGCACCTGTAAGCGGCGGAGGATTAAGTCAGAATGGAAAGTTCAGCTACGGATATGCTAGCTCTCCAGGGAAGAGATCTTCGATGGAAGATTTTTATGAGACACGAATTGATGGTGTGGAAGGAGAAATAGTTGGTCTATTTGGTGTTTTCGATGGTCATGGTGGAGCACGAGCTGCGGAGTATGTTAAGCACAATCTTTTTAGTAATTTGATCAGCCATCCAAAGTTCATTTCAGATACCAAATCCGCTATAGCTGATGCATACAACCACACAGACACAGAATTTCTGAAGTCGGAAAATAACCAAAACAGAGATGCTGGATCAACTGCTTCCACTGCCATCCTAGTTGGGGACCGCTTACTTGTTGCAAATGTGGGCGATTCTAGAGCAGTTATTTGCCGGGGTGGCACTGCCATTGCTGTCTCTCGAGATCATAAGCCTGACCAAACTGATGAGCGACGACGGATTGAGGATGCAGGAGGATTTGTGATGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCACGTGCATTTGGTGATAGGTTGTTAAAGCAATATGTTGTTGCTGACCCTGAAATTCAGGAGGAAAAGATTGATAGCTCTCTCGAGTTTCTTATACTTGCCAGTGATGGACTGTGGGATGTCGTCTCTAATGAGGAAGCTGTTGCTATGACTAAACCAATTCAGGACCCCGAAGAGGCGGCGAAGAGGTTGATGCAAGAAGCATATCAGAGAGGCAGTGCAGATAACATTACTTGCGTCGTCGTTCGTTTCTTGGCAAATCAAGGAAGTCCCTCTCGTGGAACATCTGGGTAAGACAAACTGTTTTTCCTAGCTTTTCGCCCTCTGGTTCTGACTCGTCCAAAAGTCTCGACTGAACTGCAGTAACATTCGGTGGTTCATAGTCATAGGAAATTCCAGTAACATTGATGATTGTACTTATAAAAAAAAAAAAGAAATAGTAGACATAACGAGAAGTTGTCAGGTTGGTTTTTTGTGCAATACGGTGTCTGAGTTGCTGCCTACATAGTCTTTAGCTTCCTGCCTGGAGGTTGTAGAAATGTGCATTGGTTTAATTTGTAAAGAGTCTTTAATGGAATTGTTATTGTTTGTGTTGTCTTCAACCCTTCCTAAGGTGATTGGCTTTTTCTCC 1658 42.7 MGYLNSVLSCSSQIHAAEEAPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLISHPKFISDTKSAIADAYNHTDTEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGTAIAVSRDHKPDQTDERRRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDSSLEFLILASDGLWDVVSNEEAVAMTKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQGSPSRGTSG 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 78889773 78894155 + XM_039043005.1 Bhi09g03048 45665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03048 293 Pfam Protein phosphatase 2C 63 273 IPR001932 -
Bhi09g03048 293 SMART PP2C_SIG_2 45 280 IPR001932 -
Bhi09g03048 293 Gene3D - 26 285 IPR036457 -
Bhi09g03048 293 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 3 287 - -
Bhi09g03048 293 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Bhi09g03048 293 SMART PP2C_4 24 278 IPR001932 -
Bhi09g03048 293 PANTHER ALPHABET, ISOFORM E-RELATED 3 287 - -
Bhi09g03048 293 SUPERFAMILY PP2C-like 28 280 IPR036457 -
Bhi09g03048 293 CDD PP2Cc 33 280 IPR001932 -
Bhi09g03048 293 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g03048 Bhi-Chr9:78889773 Bhi09g03444 Bhi-Chr9:87052893 1.58E-66 dispersed
Bhi09g03047 Bhi-Chr9:78889607 Bhi09g03048 Bhi-Chr9:78889773 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03048 K17506 - csv:101216117 579.711