Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03055 TATCTTCGTCGCTACGGCTACGTCCGCGAGGGGTCTGGCGGTCTTAGATCGTCAACAGCGTAGCGTCGGCCGGGTCGGATTCGTCATTGTGATTACCCCTTCCTCAAGAAATTCTCCGATTTATTGAGTGTCGAGTTATAAATTCGTAAAGAGGAGAAAATTTTGTATCAGTTAAGGAATTAGAAATGGAATCGGAGGATTCAGTGAGATTAAGATTGGAGGAATTGCACAAAGACTTAGGGAAGAAACAGAGATTCGAGGAAGCAGTTTCCACCATAATTTCTCTGCTTCAAGATCGCTATCCTACTGCTTCTCCTTCTCTACGCAAATCGTTTTATTCCGTAATTTGCCGAGTTGCGACAGTATTGAAGACGAGGTTTACGGCCCCAGGGTTCTGGCTTTCTGGTCTCAAGCTTTTTGAATTTTCCTTGTCTCTGCTCTCTGAGCATTCTGAGAGACAACACCTACAGGCTTGCGTAGCTCAGGCCAAGGAAATTCTGCACCAAATCGACAATCCATCTCCGTCTCCAGAAAGTACATCAAATGGAGGCTATCTTTTTGAGGGCCATCTCACTGTTGATCCAGAGCCACCCCAGCCGCAGTGGCTGGTGCAATCAAACCTCTTGACAGCCGCTGCAGCTGCGCTATCTAATGCTGAATCTTCTCAAAGTCCGGCTGAGAACAGCAACACTTCTGAGACTGTTGCTAATATTCTTCAAGCGCTTAATGGAAATTTTGATGACGTTATAGATGGGATCATAAATTTTGAAACGGATAGCGGAACACCTAAAGTCCCTCCTGCAAGTAAAGAAGTCGTTGCCAAACTTCCCGTAATTACTATAACAGAAGAAGTTCTTGCCAAGCTAGGAAAAGATGTACAATGTGCCATTTGCAGGGAAAACTTGGCTGTTGATGACAAGATGCAAGAATTGCCTTGCAAACACACATTCCACCCACCTTGTTTGAAGCCATGGCTGGATGAGCATAACTCTTGTCCTATCTGTCGATATGAATTGCCCACTGATGACCACAAATACGAGAGCTGGAAGGAGCGAGAGAAAGAGGCCGAGGAAGAAAGAAAAGGAGCTGCAAATGCTGTTCGTGGTGGTGAATTTATGTATATTTGAACGGTATTGCAATGCCTTAGCATCAGGGAGTCAGTTACCAAATCATGTATGATAAGGGTATTATTTTGTACGTGTGATTTTTCTGGACTTGGATGTTGAAGCTTCGTTTTTTAGTTATTCTTTTATAGTAGAAACTATGGACAACAGTTTTCATCTC 1284 43.85 MESEDSVRLRLEELHKDLGKKQRFEEAVSTIISLLQDRYPTASPSLRKSFYSVICRVATVLKTRFTAPGFWLSGLKLFEFSLSLLSEHSERQHLQACVAQAKEILHQIDNPSPSPESTSNGGYLFEGHLTVDPEPPQPQWLVQSNLLTAAAAALSNAESSQSPAENSNTSETVANILQALNGNFDDVIDGIINFETDSGTPKVPPASKEVVAKLPVITITEEVLAKLGKDVQCAICRENLAVDDKMQELPCKHTFHPPCLKPWLDEHNSCPICRYELPTDDHKYESWKEREKEAEEERKGAANAVRGGEFMYI 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 79082641 79084949 + XM_039040879.1 Bhi09g03055 45672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03055 313 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 6 307 - -
Bhi09g03055 313 Pfam Ring finger domain 232 274 IPR001841 -
Bhi09g03055 313 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 193 280 IPR013083 -
Bhi09g03055 313 ProSiteProfiles Zinc finger RING-type profile. 233 274 IPR001841 -
Bhi09g03055 313 PANTHER ABI3-INTERACTING PROTEIN 2-1 6 307 - -
Bhi09g03055 313 SUPERFAMILY RING/U-box 227 280 - -
Bhi09g03055 313 Coils Coil 284 304 - -
Bhi09g03055 313 SMART ring_2 233 273 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g03055 Bhi-Chr9:79082641 Bhi08g01340 Bhi-Chr8:40601632 5.68E-25 dispersed
Bhi09g03055 Bhi-Chr9:79082641 Bhi10g00735 Bhi-Chr10:15647247 9.82E-20 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03055 K16274 - zju:107420142 427.172