Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03078 ATAATCATCTAATAATTTTCTTGAGTTTAAGGCTCAATTCTGCAGCGGAAGAACAGAATAGCGTCCTTGTCAGCAGCAGCACAAAAATGGGTTCCTTTCATTACCCATCTCTGCAAACAAGAAAGCGACCCCTTATTACTGAGAGCTCCCATTTGCAAATTTGTAACCAGAAACGAAGAGAGAGAGAGAGAAAGAGGAAATGGGTTTGAAGGGTTGCTGCGTAGTGTTGCAGGTTTTGTAACAGATTTATGGCAGATGGGTTTTTATCTTTATCTGCGAAATAATTCATTCCTTCATCCTCTGTAATTTCCCCAATTCTCTCTCCATTTGTCTACAGTCGTTTATTGCTCTGAGATGTGATTGAACGGCCATGGCTTTTTTCTTTCGTCTAACATAAGAATCCAGCTTACTCTAAAGGGGAATTCAAATATTTTTCCTCTTAAACTCAACAACGTCTCTCCCATTACAGCCTCTCAGCATTTTGATGTCCTTGAGATAAGAGGAGGGTTCTTTCTCTTTTTTCATTTTGGTGTTGGTTCAAAGGGGTTCTCAGGTTCTTGTTACTAGACAGCCATGGAAAGTGCAGAAGTGGTATAAAATGAAGTCTGTGAAGAAGGCAGCCATGGCATTTCCTGTTGAGCTTGTTATTTTGGCTTTTCTCGTCTGTGCTACCGTTGGTGTGGTGGATTCTGATGATGGGGCAACGTTGTTGGAGATAAAGAAATCATTCAGGGATGTGGATAATGTTCTTTATGATTGGACAAGCTCACCTTCATCAGACTACTGTATATGGAGAGGTGTTACCTGTGACAATGCCACTCTCAATGTTATCTCTCTTAATCTTTCAGGTCTCAGTCTGGATGGGGAAATTTCTCCTTTAATTGGGAACCTCAAGGGCCTGCAAGCTTTGGATTTGAGGGGGAATAGTCTTTCTGGGCAAATTCCAGATGAGATTGGTGACTGCTCTTCGTTAATAAATCTGGATTTATCGTTTAATGAGATTTATGGAGACATACCATTTTCCATTTCAAAGTTGAAGCAACTCGAAATGCTTGTTCTGAAAAACAATCGACTGATTGGGCCGATCCCGTCTACCTTATCTCAGATTCCAAACTTGAAGGTCTTAGATCTAGCACAGAATAATCTTAGTGGGGAAATACCGAGACTAATTTACTGGAATGAAGTGTTACAATATCTTGGTTTGCGTGGCAACAATTTGGTGGGCACACTCTCTCCAGATATGTGCCAGCTGACTGGTTTATGGTATTTTGATGTGAGAAACAACAGTTTAACTGGCAGCATTCCTCAAACAATAGGCAACTGCACAGCCTTCCAGGTCTTGGACCTGTCATACAATCATCTCACTGGAGAGATACCATTTAACATTGGTTTCCTTCAAGTAGCCACACTGTCCTTACAGGGTAATCAGCTATCAGGTCCCATTCCACCTGTAATTGGTTTGATGCAGGCGCTTGCTGTGCTAGATTTGAGCTGCAACATGTTAACTGGTCCAATCCCCTCCATCTTAGGGAATCTGACTTATACTGAGAAGCTGTACTTGCATAGTAACAAGCTCACTGGGTCCATTCCTGCAGAGCTCGGAAATATGACTAAGCTTCATTATCTGGAACTGAATGATAATCATCTTACTGGGAATATTCCAGCTGAGCTTGGAAAACTCACTGATTTGTTCGATCTAAATGTTGCTAATAACAATCTCGGAGGACCTATCCCTGACAATCTTAGCTCTTGCACAAATCTCAACAGCCTAAACGTGCATGGCAACAAGTTGAATGGAACTATTCCGCTGTCTTTCCAGAGGCTAGAGAGTATGACTTACTTGAATCTCTCATCAAATGATCTACGAGGTCCTATTCCAATCGAGCTGTCTCGTATTGGCAATTTAGATACGCTAGACATTTCAAATAACAAAATTAGTGGCACAATTTCTTCATCCTTTGGCGATCTGGAACATCTCCTAAAGCTAAATTTAAGTAGGAATCATTTAACGGGATTTATTCCAGCTGAATTTGGCAATCTAAGGAGTGTAATGGAAATAGATATTTCACACAACCAACTCTCTGGGTTCATTCCTCAAGAACTGAGTCAACTTCAAAATCTTCTCTCCTTGAGACTTGAAAACAACAATTTATCTGGGGACCTGACGTCACTGATTAGCTGCCTAAGTCTTACTGAATTAAACGTATCTTATAACAATCTAGCTGGTGACATTCCCACAAGCAACAACTTCTCTAGGTTTTCGTCTGACAGTTTCCTTGGAAATCTTGGCCTCTGTGGATATTGGAATAGCAACAACTACCCCTGTCATGAAGCTCATACAACTGAGCGAGTGACCATATCTAAAGCCGCTATCCTGGGAATTGCTCTTGGTGCCCTTGTAATCCTTCTAATGATCCTTCTAACAGTGTGCCGTCCGAACAACACAATACCTTTTCCAGATGGATCACTTGACAAACCAGTTACTTACTCAACTCCCAAGCTAGTGATCCTTCACATGAACATGGCCCTTCATGTTTATGAGGATATTATGAGGATGACTGAAAATTTGAGCGAAAAGTACATTATTGGATATGGAGCTTCAAGCACGGTCTACAAATGTGTACTGAAGAATTGTAAACCTGTGGCTGTTAAAAAGCTCTACTCTCACCAGCCCCATAGCATGAAGGGATTCGAGACGGAACTGGAAACCGTGGGTAGCATCAAGCACAGAAATCTAGTCAGCCTCCAAGGATACTCCTTATCCCCCTCTGGAAATCTCCTCTTCTATGACTACATGGAAAATGGCAGTCTTTGGGATCATCTACATGGCTCTAGCTCTACCAAGAAAAAGAAGCTGGACTGGGACACTCGGCTCAATATTGCACATGGAGCAGCCCAGGGACTATCGTATCTACACCATGATTGTAGCCCTCGCATTATCCACAGGGATGTTAAGTCATCTAACATTCTATTAGACAAGGATTTTGAAGCCCATCTCACTGATTTCGGCATCGCCAAGAGCTTATGCACCTCAAAGTCATACACGTCCACTTACATCATGGGAACCATTGGATATATTGATCCAGAATATGCTCGGACTTCCCGACTTACTGAAAAGTCTGATGTTTACAGCTTTGGCATTGTGTTACTCGAATTGCTCACAGGAAGGAAAGCTGTGGACAATGAATCAAATCTCCACCAATTGATCTTATCGAAAACAGCCAACAATGCTGTAATGGAGACAGTTGATCTTGAAATAACTGCAACTTGCAAGGACCTTGGAGCGGTAAAGAAGGCATTTCAGCTCGCTCTCCTTTGCACCAAGAGGCAGCCATCCGATCGACCAACAATGCACGAAGTGACACGCGTCATCGGGAGTCTTCTCCCCTCGGCCACAGCACCAAAGCAAACACCAAACATAACAGCCATGCCCCCATCTGCAAAATCCCCTTGCTACAAGGATGAATATGCAAATCTAAAGACGCCGCATGTGCTGAACTGTCCAACGATGAGCACCTCAGACGCCCAGCTCTTCCTCAAGTTTGGAGAGGTAATATCACAAAACAGTGAGTAACAAGCTAGGTAAACCTCTACAACTACGAAAAGAATGCCATCCAAGAAGGGTTGGCTTTGTGGGTAGACTTGAATTTCTGTATAAAAGATTTAACCACCACTTTGCTTTACTTTGTAGTGTAAGCTTATATAAAATTAGGGAAGCAACAAAGCATGGACATATGACATGTACTGGTAGATTTAGATGTGGAAAGTGATTTTGGGAAGGAAAGAAGTATTGTTTATCTATTAATGGGAGTGATTTTTGGGGTGTGGGACCTATTGAATTTGAAAGCATCTTGGGTCTGGCCTTTGTTTACTATGGGGTTTCATGTTCAGGGTTAGTAATTGATGAGTGAGAGGATGATGGCATTTAAAGTGTTAACAGCAAGGCAGCAATAATTCACTTGGTCTGGGCCTTGATGTTTTCCTGCAGTGTACGGTTTGTCAATTTACTTTAACTAAGGCAATGATTTCAGTGGTAATAAA 4041 41.95 MKSVKKAAMAFPVELVILAFLVCATVGVVDSDDGATLLEIKKSFRDVDNVLYDWTSSPSSDYCIWRGVTCDNATLNVISLNLSGLSLDGEISPLIGNLKGLQALDLRGNSLSGQIPDEIGDCSSLINLDLSFNEIYGDIPFSISKLKQLEMLVLKNNRLIGPIPSTLSQIPNLKVLDLAQNNLSGEIPRLIYWNEVLQYLGLRGNNLVGTLSPDMCQLTGLWYFDVRNNSLTGSIPQTIGNCTAFQVLDLSYNHLTGEIPFNIGFLQVATLSLQGNQLSGPIPPVIGLMQALAVLDLSCNMLTGPIPSILGNLTYTEKLYLHSNKLTGSIPAELGNMTKLHYLELNDNHLTGNIPAELGKLTDLFDLNVANNNLGGPIPDNLSSCTNLNSLNVHGNKLNGTIPLSFQRLESMTYLNLSSNDLRGPIPIELSRIGNLDTLDISNNKISGTISSSFGDLEHLLKLNLSRNHLTGFIPAEFGNLRSVMEIDISHNQLSGFIPQELSQLQNLLSLRLENNNLSGDLTSLISCLSLTELNVSYNNLAGDIPTSNNFSRFSSDSFLGNLGLCGYWNSNNYPCHEAHTTERVTISKAAILGIALGALVILLMILLTVCRPNNTIPFPDGSLDKPVTYSTPKLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAVKKLYSHQPHSMKGFETELETVGSIKHRNLVSLQGYSLSPSGNLLFYDYMENGSLWDHLHGSSSTKKKKLDWDTRLNIAHGAAQGLSYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCTSKSYTSTYIMGTIGYIDPEYARTSRLTEKSDVYSFGIVLLELLTGRKAVDNESNLHQLILSKTANNAVMETVDLEITATCKDLGAVKKAFQLALLCTKRQPSDRPTMHEVTRVIGSLLPSATAPKQTPNITAMPPSAKSPCYKDEYANLKTPHVLNCPTMSTSDAQLFLKFGEVISQNSE 991
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 79474582 79482634 - XM_039040939.1 Bhi09g03078 45695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03078 991 ProSiteProfiles Leucine-rich repeat profile. 172 194 IPR001611 GO:0005515
Bhi09g03078 991 Pfam Protein kinase domain 660 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g03078 991 ProSitePatterns Serine/Threonine protein kinases active-site signature. 780 792 IPR008271 GO:0004672|GO:0006468
Bhi09g03078 991 Gene3D Ribonuclease Inhibitor 193 268 IPR032675 -
Bhi09g03078 991 Gene3D Phosphorylase Kinase; domain 1 639 732 - -
Bhi09g03078 991 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERECTA 13 977 - -
Bhi09g03078 991 Gene3D Transferase(Phosphotransferase) domain 1 733 940 - -
Bhi09g03078 991 Pfam Leucine Rich repeat 527 543 IPR001611 GO:0005515
Bhi09g03078 991 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 13 977 - -
Bhi09g03078 991 SUPERFAMILY L domain-like 267 555 - -
Bhi09g03078 991 Gene3D Ribonuclease Inhibitor 270 584 IPR032675 -
Bhi09g03078 991 SUPERFAMILY Protein kinase-like (PK-like) 635 923 IPR011009 -
Bhi09g03078 991 Pfam Leucine rich repeat N-terminal domain 31 71 IPR013210 -
Bhi09g03078 991 CDD STKc_IRAK 663 928 - -
Bhi09g03078 991 Gene3D Ribonuclease Inhibitor 30 192 IPR032675 -
Bhi09g03078 991 Pfam Leucine rich repeat 435 494 IPR001611 GO:0005515
Bhi09g03078 991 Pfam Leucine rich repeat 148 207 IPR001611 GO:0005515
Bhi09g03078 991 Pfam Leucine rich repeat 291 350 IPR001611 GO:0005515
Bhi09g03078 991 SMART LRR_typ_2 457 480 IPR003591 -
Bhi09g03078 991 SMART LRR_typ_2 337 361 IPR003591 -
Bhi09g03078 991 SMART LRR_typ_2 98 122 IPR003591 -
Bhi09g03078 991 SMART LRR_typ_2 218 242 IPR003591 -
Bhi09g03078 991 SMART LRR_typ_2 170 194 IPR003591 -
Bhi09g03078 991 ProSiteProfiles Protein kinase domain profile. 657 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g03078 991 SUPERFAMILY L domain-like 57 313 - -
Bhi09g03078 991 SMART serkin_6 657 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g03078 991 ProSitePatterns Protein kinases ATP-binding region signature. 663 686 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00661 Bhi-Chr5:19561470 Bhi09g03078 Bhi-Chr9:79474582 0 dispersed
Bhi07g01064 Bhi-Chr7:34483397 Bhi09g03078 Bhi-Chr9:79474582 3.38E-67 dispersed
Bhi09g03078 Bhi-Chr9:79474582 Bhi11g00783 Bhi-Chr11:21296001 6.15E-159 dispersed
Bhi09g03078 Bhi-Chr9:79474582 Bhi02g00489 Bhi-Chr2:9418525 8.12E-147 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88175 PF00069 Pkinase 7.00E-46 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03078 K20718 - csv:101214398 1859.34