Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03088 ATTCCGCTATTTTTTCTTTTTCCCACTTTCCCTCTCTTTGTTATAGTTGAAACGAAGTGGGTTTCTGTTCTTGCACATTTTTTCTGCTTGTTGGTGTGACTTTGCATTCAAGAAACTCTCTCTGTTTCTATTTTCTGTTTAAATTTACCTCTAACAATGTGGGTTTATGTGGGTTTTCTTTATTAAGCTCGATGAACTTGATTGTGTCTTGGTTTGCTCTCAATGACCCTTTTCTTTGATTTCATCTGTTCGGAACTAGCCTTCGACTGTGATGGATGTGAACAGCAATAGAGCTTTGAAAGTTGTTGGAGGAAGTTTGTCTCAGATGGAAAGTGAAAATGGAGGGCAAGTTGCGGTTAATATTAGCAGCGTTGAAAATGGCTATTCTGTACCGAAGCAAAACAGAGTCGATTCACAGACCAAAGAGCCGATTGATTCGAGCATTGGCTATAGCTACGATTCACAACTCGCTCCCACTGCGAATAAGCCACCGAAAATCCCCAGTTCAAAAGGAACCCTCACGCCCAGAAGATCTCTTAGAAGACCAATCCTCTCGAAATCCAAGTCCAGATTTGGGGAACAGCCAGGTTATATCGATTCAGACGTGTTTGAGGAGAATCATGTGTCGTTGAGAGAACAAATCGGTTCAACTTCATCCAGAAGCTCTACTGTCAATACGCCGAAGGCCCAACCTGAGGAAGAAGATGATGCTGGTATCTTCGAGATTGAGCAGTTGAATAATAAGCACAAGAAAGTGAAGGTGAAGACAGTGATTGAGTGGATTGGAGTTTTTTGCATTATTGGTTGCTTGGTGGCTAGTTTGACTGTTAACCCTTGGAAGAATCGCTTCCTTTGGGGTTTAAGGGTTTGGAAATGGCTTTTACTTGCTACTGTGATTTTGTGTGGAGTGATATTTACTCGTTGGGTTATGAATGTGATTGTATTTTTGATTGAGAGGAACTTTTTGCTTAAGAAAAAAGTGCTTTATTTTGTTCATGGGTTGAAGAAGAGTGTTCAAGTGACCCTTTGGTTGACATTGGTTCTCGTTACATGGGGATCATTATTCGATCAGAGAAACCATAAAATTTCGAGTAGGATCACTGCAAAGATTTTGGATTCTGTTACATGGACTCTTGTAAGCCTTCTTATAGGGGCGGTCCTGTTGTTGGTTAAAACATTGTTGCTGAAAATACTTGCCTCCAAGTTCCATATGAATCGATTTTTCGACAGAGTTCAGGAATCCATTTTCCTTCATTATGTTCTACAAACCCTCTCAAGGGGTGTATTTATAGGGGAGGCTGGAACTACTTCCAAATCCAGCAGTGGTAGATTGAGTTTGAAGAGTAAAAAATCAGACCGTAAAGAGGTGATTGACCTGGGAAAGATTCACCAGCTGAAGCGGGAGAAGGTTTCAGCTTGGACAATGAAGGTATTGGTTGATGCAGTTACTAGTTCGGAGATGTCAGTCTCACAAATACTCGATGAAAGCTACCAAGATGTCGCTGATGGTGAGATTGCAGACGAGATGGAAGTTGCCAAAGCTGCCGCCTACAAGATCTTCAACAATGTTGCTCTTCCTGGAAACAAGTTCATAGAGGAAGAGGATCTTCTAAAATTCATGATCAAAGAAGAAGTTGATCTTGTGTTACCACACTTTGAGATAGATGATACAAGGAGGATTGACAAGAAAGCTTTAACAAATTGGGTGGTTTATCAAGGGAGGAAAACTCTAGCACATGCCTTGAAAGACACTAAAACAGCAGTGAAGCAATTGAATAATTTAGTAACGGCGCTTATTATAATCGTAACAGCTGTTATTTGGCTTCTGTTGATGGAAATTGCTACTACCAAAGTACTTGTCTTCCTTCTAACTCAGCTTGCAGTGGCAGCTTTCATGTTTGGAAACACTTGCAAGACTGCATTTGAAGCTCTAATCTTTGTGTTTGTTATGCATCCATTTGATGTCGGGGACCGTTGTGTTGTTGATGGCGTCCAGTTGTTGGTTGAAGAAATGAACATCTTGACAACAGTCTTCTTGAAACTCAACAATGAGAAGGTGTATTATCCCAACTCAGTTTTGGCAACAAAACCCATCACTAACTACTACAGAAGTCCAGACATGGGTGAAACCATCGAATTCTCAATCGGTTTCACAACACCATTGGAGAGGATTGGGGTCATGAAGGACAAAATAAAGAGGTATTTGGAGAAGAATTCACAACACTGGTATCCAAATCATAGTGTGGTGGTGCAGGAGATCGAAAACGTGAATAAGATCAAGATCGCTCTTTATACGAACCACACCATGAATTTTCAAGACTGGACTGAGAAGAACCGACGAAGAACCGAGCTCGTGATGGAGTTGAAGAGGATTTTTGAAGAACTGAAGATCAACTACAATCTTCTGCCTCAAACAGTTCATCTCATCCAAGTTGAGGGGCATCACTGAAGTCTACAGGAGATGGTTAGCTTTTGTTAGCTGCTTTGTTAACTTAATTAGAGACATTATGTAATATTAACTAAAAAGAATCCTATATTAGTATCAGTTTAGGCAAGCTACTTCTGGTTATTAATGGGGAAACACTGTCCATTAGAATTGGAAGATATAAGTTGTAGAACTGTTGTAGTAGGTTTAGCTACTGATCTTATTTAGCCATGTAATAATATTTAGAATTGGTGATTAA 2684 40.05 MDVNSNRALKVVGGSLSQMESENGGQVAVNISSVENGYSVPKQNRVDSQTKEPIDSSIGYSYDSQLAPTANKPPKIPSSKGTLTPRRSLRRPILSKSKSRFGEQPGYIDSDVFEENHVSLREQIGSTSSRSSTVNTPKAQPEEEDDAGIFEIEQLNNKHKKVKVKTVIEWIGVFCIIGCLVASLTVNPWKNRFLWGLRVWKWLLLATVILCGVIFTRWVMNVIVFLIERNFLLKKKVLYFVHGLKKSVQVTLWLTLVLVTWGSLFDQRNHKISSRITAKILDSVTWTLVSLLIGAVLLLVKTLLLKILASKFHMNRFFDRVQESIFLHYVLQTLSRGVFIGEAGTTSKSSSGRLSLKSKKSDRKEVIDLGKIHQLKREKVSAWTMKVLVDAVTSSEMSVSQILDESYQDVADGEIADEMEVAKAAAYKIFNNVALPGNKFIEEEDLLKFMIKEEVDLVLPHFEIDDTRRIDKKALTNWVVYQGRKTLAHALKDTKTAVKQLNNLVTALIIIVTAVIWLLLMEIATTKVLVFLLTQLAVAAFMFGNTCKTAFEALIFVFVMHPFDVGDRCVVDGVQLLVEEMNILTTVFLKLNNEKVYYPNSVLATKPITNYYRSPDMGETIEFSIGFTTPLERIGVMKDKIKRYLEKNSQHWYPNHSVVVQEIENVNKIKIALYTNHTMNFQDWTEKNRRRTELVMELKRIFEELKINYNLLPQTVHLIQVEGHH 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 79659869 79663362 - XM_039043801.1 Bhi09g03088 45705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03088 725 MobiDBLite consensus disorder prediction 38 85 - -
Bhi09g03088 725 Gene3D - 562 611 IPR023408 -
Bhi09g03088 725 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 93 719 IPR016688 -
Bhi09g03088 725 SUPERFAMILY Sm-like ribonucleoproteins 551 611 IPR010920 -
Bhi09g03088 725 Pfam Mechanosensitive ion channel 503 708 IPR006685 GO:0016020|GO:0055085
Bhi09g03088 725 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 93 719 - -
Bhi09g03088 725 PIRSF Memb_At2g17000 15 722 IPR016688 -
Bhi09g03088 725 MobiDBLite consensus disorder prediction 38 106 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g03088 Bhi-Chr9:79659869 Bhi09g03090 Bhi-Chr9:79739624 0 dispersed
Bhi09g03087 Bhi-Chr9:79659869 Bhi09g03088 Bhi-Chr9:79659869 0 tandem
Bhi09g03088 Bhi-Chr9:79659869 Bhi09g03089 Bhi-Chr9:79659869 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03088 K22048 - csv:101217197 1100.5