Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03090 ATAATCTCCCTCGTTTTATTTTAGACCCGCCTTCACTGAATGATGACAGCAACAAAAACGTATATGAATTTTAGGCCCGCGGTTTGCAATAACAACCAGTTGTGTGAAGGCGGAGCGAAGCTCGTCGTTGAAGCTTTAACTTCAGTGGCTTTGTTCTTCCTTCTCTTTGTTTTTCTTGAAACGAAGTGGGTTTCTGTTCTTACCCATTTTTTCTGCTTCTGGGTGTAACTTTGCATTCAAGAAACTGTCTCTGCCTCTGTTTTCTGAGCTAGGTTTTGATTCTGATGGATGTGAACGGCAATAATCCTTCGAAAGCTGTTCGAAGAAGTTCGTCTCTAAAGGAAAGTGAAAATGAAGGCCATGTTGTGGTTGAAATTAGCAGCGTTTTGTCTTCCAAAGAAACCAAAGATGAAAATGGCTACTCTGTAACGAAGCAAAACAGAGTCGATTCACAGACCAAAGAGCCGACCGATTCGAGCATTGGCCATTCCAACGATTCATATCTCCCTCCCATTGCGAATGAGCCCCTGAAAATTCCCTATTCAAATGGAACCCTCACGCTCAGAAGATCTCTCAAAAGATCATACCTATCGAGACCCAAATCCAGATTTGGGGAACAGCCACGTTACACCGATTCAGATATGTTTGAGGAGAATGATGTGTCGTTGAGAGAACAAATCGGTGCAACTTCATCGAGAAGCTCTGTTCTCAACCCCCCGAATGCCCAATCTGAGGAAGAAGATGGTGAGGATATCGTCAAGACAGAGAAGTCGAACAAAAAGGACAAGAAAGTGAAGGTGAAGACATTGATTAAGTTGGTTGGAGCTTTTTGTTTAATTGCTTGCTTGGTGGCTAGCTTGACTGTTAACCGTTTGAAGAATTGCTTCTTTTGGGGTTTGAAGGTTTGGAAATGGTGTTTACTTGCTACTGTGATTTTTTGTGGAAAGATATTTACTACGTGGGTTATGCATGTGGTTGTCAATTTGATTGAGAGAAACTTTTTGCTTAAGAAAAACGTGCTTTATTTTGTTCATGGGTTGAGGAAGAGTGTCCGAGTGACCCTTTGGTTGACATTGGTTCTTGTTACATGGGCGTCGTTGTTTAATTGGAATAACCATAGGAGTTCAAGAACCGTTGGGAAGATCTTGGATGCTATTACATGGACTCTTGTTGCCCTTCTTATAGGGGCTGTTCTGTGGTTGGTAAAAACATTGTTGTTGAAAATACTGGCCTCCAAGTTCCATAAGAACCGATTTTTCGACAGAATTCAGGAATCCATTTTCCATCATCATGTTCTACAAACCCTCTTGAAGTGTCCATTAAAGGAGGGGGCTGAAGGTACTGCCAAGTTCAGCTGTTGTCGATTTAGTTTGAAGAGTAAAAAATCAGACCATAAGAAGGTGATTGACACGGGAAAGATTCACCAGCTGCAGCGAGAGAAAGTTTCAGCTTGGACGATAAAGGTGTTGATCGAGGCAGTTACAAGTTCGCAGATGTCGATCTCACAAATACTGGATGAAAGTAGCAATGTTGCCGATGGTGAGATCACTGATGAAATGGAAATTGCCATAGCCGTTGCCTGCAAGATCTTCAAAAATATTGCTCATGGAAAAAAGTTCATACAAGAAGAAGATCTTCTGAAATTCATGGTCAAAGAAGAAATCGATCTTGTGTTACCACACTTTGAGGTAGATGAGACAAGGAAGATTGACAAGAAAGCTCTAATAAATTGGGTGGTGAAGGTTTATCAAGAGAGGAAAACTCTAGCACATGCCTTGAATGACACTAAAACAGCTGTGGAGGAATTGAATAATTTGGCAATAGCACTTATTATAATAGTAACAGCTGTCATATGGCTTCTGTTGATGGAAATTGCTACATCCAAAGTACTTGTTTTCCTTCTATCTCAACTTGCAGTGGCAGCTTTCATGTTCGGAAACGCTTGCAAGACTGCATTTGAAGCTCTAATCTTTGTGTTCGTTATGCATCCATTCGATGTCGGGGACTTTTGTGTTGTTGATGGCGTCCAGCTGTTGGTTGAAGAAATGAACATCTTGACAACGGTCTTCTTGAAACTCAACAACGAGAAGGTGTATTATCCCAACTCAGTTTTGGCAACAAAGCCCATCACTAACTATTATAGAAGTCCGAACATGTTTGACACCATCGAATTCTCGATCAGTTTTGCAACGCCACTGGAGAGGATTGGAGCCATGAAAGAGAAAATAAAGAGGTATTTGGAGAAGAATCCACAACACTGGCATCCAAATCATAGTGTGGTAGTGAAAGAGATTGAAAATGTGAATAAGATAAAGATCGCTCTTTTTGCGAAGCACACCATGAATTTTCAAGACTGGTCTGAGAAGAACCGACGAAGAACCGAGCTCGTGATGGAGTTGAAGAGAATTTTTGAAGAACTGAAGATCAACTACAATCTTCTGCCTCAAACAGTTCATCTTTTTCCAGTTCAGGAGCAGTAAAGTCCAGAGAAGACCTTAAAGCTTCTGCTTCTGATACTTTGACTAAGAAATGGTTAGCTTGTGCTAGCTGCTTTGTTAACTTAGTTAGAGCCAGTAGTAGTATTTACTAAAGAGAATCATAGGACTGTTAACTTACCTAGGCTAAGCTACTAACTGGAAATATACAACTTCTAAGACTGTTGTAGCCATGTAATAATGTTAATAATGTTGCCATGTTAGGGTTACACTCATCTTACTAATGTTTAGCCATGTAATTAATTAATATATATGTTTATTAAGTGGAGTCTACTATTTCATTTGTTTCAATGAAAA 2792 40.15 MDVNGNNPSKAVRRSSSLKESENEGHVVVEISSVLSSKETKDENGYSVTKQNRVDSQTKEPTDSSIGHSNDSYLPPIANEPLKIPYSNGTLTLRRSLKRSYLSRPKSRFGEQPRYTDSDMFEENDVSLREQIGATSSRSSVLNPPNAQSEEEDGEDIVKTEKSNKKDKKVKVKTLIKLVGAFCLIACLVASLTVNRLKNCFFWGLKVWKWCLLATVIFCGKIFTTWVMHVVVNLIERNFLLKKNVLYFVHGLRKSVRVTLWLTLVLVTWASLFNWNNHRSSRTVGKILDAITWTLVALLIGAVLWLVKTLLLKILASKFHKNRFFDRIQESIFHHHVLQTLLKCPLKEGAEGTAKFSCCRFSLKSKKSDHKKVIDTGKIHQLQREKVSAWTIKVLIEAVTSSQMSISQILDESSNVADGEITDEMEIAIAVACKIFKNIAHGKKFIQEEDLLKFMVKEEIDLVLPHFEVDETRKIDKKALINWVVKVYQERKTLAHALNDTKTAVEELNNLAIALIIIVTAVIWLLLMEIATSKVLVFLLSQLAVAAFMFGNACKTAFEALIFVFVMHPFDVGDFCVVDGVQLLVEEMNILTTVFLKLNNEKVYYPNSVLATKPITNYYRSPNMFDTIEFSISFATPLERIGAMKEKIKRYLEKNPQHWHPNHSVVVKEIENVNKIKIALFAKHTMNFQDWSEKNRRRTELVMELKRIFEELKINYNLLPQTVHLFPVQEQ 731
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 79739624 79743306 - XM_039041157.1 Bhi09g03090 45707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03090 731 Gene3D - 569 618 IPR023408 -
Bhi09g03090 731 SUPERFAMILY Sm-like ribonucleoproteins 558 618 IPR010920 -
Bhi09g03090 731 MobiDBLite consensus disorder prediction 49 72 - -
Bhi09g03090 731 PIRSF Memb_At2g17000 2 731 IPR016688 -
Bhi09g03090 731 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 25 725 IPR016688 -
Bhi09g03090 731 Pfam Mechanosensitive ion channel 511 715 IPR006685 GO:0016020|GO:0055085
Bhi09g03090 731 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 25 725 - -
Bhi09g03090 731 MobiDBLite consensus disorder prediction 1 76 - -
Bhi09g03090 731 MobiDBLite consensus disorder prediction 134 163 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g01835 Bhi-Chr2:49759567 Bhi09g03090 Bhi-Chr9:79739624 0 dispersed
Bhi09g03088 Bhi-Chr9:79659869 Bhi09g03090 Bhi-Chr9:79739624 0 dispersed
Bhi09g03090 Bhi-Chr9:79739624 Bhi12g01438 Bhi-Chr12:46336647 2.73E-170 dispersed
Bhi09g03089 Bhi-Chr9:79659869 Bhi09g03090 Bhi-Chr9:79739624 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03090 K22048 - csv:101216955 1036.94