Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03122 AAAGTTGTTGGGATGAAAATGTTGGACCTGTATCGAATATTTTAGAGTACTTGATGTATGGTGAAATATGTTAATGGCAAAGGCGTTATTGGTTCCTTTAATAAGTTTCAACTCACCCAGACTTATACAACCTTTTTAATTTTGAGCACTTATGAGCACAACGGTGAGAAGAAAAACATGGCTGTTACACAATTTGAACCAGTTGATGCTAGACGTTGCTTCCCTTGCTGGGATGAACCTGCTTTTAAGGCTACATTCAAGATCACGTTAGATGTACCATCTGAACTAATAGCACTTTCCAATATGCCAATTATTGAAGAAAAAGTGAATGGTCATTTGAAGACGGTTTCATATCAAGAATCACCAATTATGTCGACATATTTAGTGGCCATTGTTGTTGGTTTATTTGATTATGTGGAAGATCATACAACTGATGGGGTCAAAGTTCGTGTATACTGTCAAGTTGGAAAGGCAAATCAAGGAAAATTTGCATTACATGTTGCTGTTAAGACTCTTGATCTATACAAGGAATATTTTGCTGTGCCATACTCTCTGCCTAAACTCGACATGATTGCAATTCCTGACTTTGCTGCTGGGGCCATGGAAAACTATGGTTTAGTTACCTATCGTGAGACTGCTTTACTTTATGATGATCAGCACTCAGCAGCCGCTAACAAACAGAGGGTGGCAACTGTTGTGGCTCATGAACTTGCACACCAATGGTTTGGCAACCTTGTAACTATGGAGTGGTGGACACATTTGTGGCTGAACGAGGGATTTGCAACATGGGTGAGTTATTTAGCTACTGATAGCTTGTTTCCAGAGTGGAAAGTATGGAATCAATTTCTTGAAGAGTCAAACCACGGTCTTACTTTGGATGGGCTTGCTGAATCACATCCAATTGAGGTTGAGATAAATCATGCCAGTGAAGTTGATGAAATATTTGATGCAATTAGCTACAGAAAAGGTGCATCTGTTATTCGAATGTTACAAAGCTATCTCGGTGCTGACTGTTTTCAGAAATCACTCGCTGCATACATAAAAAAGCACAGTTGCTCAAATACTAAGACTGAAGACTTATGGGCTGCTCTAGAGGAGGGGTCTGGTGAACCTGTGAACAACTTAATGAGTTCCTGGACCAAGCAACAAGGATATCCTGTTGTCACTGTCAAAGTGAAAGATGAGAAATTGGTGTTTGAGCAGTCAAGATTTTTGTCGAGTGGTTCCTGTGGAGAGGGGCAATGGATTGTTCCCATAACATTGTGCTGTGGCTCTTATGATGTGCGCAAGAATTTTCTGCTGCAAACAAAGACAGAATCTGTAGACATCAAGGAGTTCCTTGGTTGCTCCATCAGCAAATACTCTGGTGGAAATGATAAATATTGTGATTGGATAAAGCTTAATGTAGATCAGACTGGTTTTTACCGGGTGAAGTATGACGAAGATCTTGCAGCTAAGCTTAGAAATGCAATAGAGAAAAATCATTTGACTCCAACGGACAGATTTGGTATTTTGGATGATGCATTTGCCCTTTCTATGGCTTGCCAGCAATCAGTTGCCTCTTTGCTTACCTTGATGGGTGCTTACAGGGAGGAACTTGACTATACTGTGTTATCGAATTTGATCAGTATAAGCTACAAACTTGAAAGAATTGCAGCTGATGCGGTTCCTGAGTTACTGGACAACCTCAGACAATTTTTCACCAACATTTTCCAATTTGCAGCAGAAAAACTAGGTTGGGATCCCAAACCAGATGAAAGCCATCTCGATGCAATGTTGAGAGGAGAACTTTTGACTGCTCTTGCTCTGTTCGGTCATGAGCAGACAATAAAAGAAGCAAATAGGCGATGCCTTGCATTCTTAGACGACAGAAGTACGCCAGTACTCCCACCCGATATTAGAAAGGCGGCGTATGTGGCCGTAATGCAGACAGTCAATGCTTCAAACAGATCTGGTTACGAATCTCTTTTAAGAATTTATAGAGAGTCTGATCTTAGCCAGGAGAAAACACGCATTCTAAGTTCCTTGGCATCTTGTCCAGATCCTAACATCATTCTTGAAGTTCTCAACTTTTTATTGTCGTCTGAGGTTCGTAGTCAAGATGCTGTTTTTGGACTAGGTGTTAACTGGCAAGCACGTGAAACAGCTTGGACATGGCTGAAGACTAAATGGGAAGAAATCTCCAAAATCTTCGACTCCGGGTTTCTGATTGGACGCTTTGTCAGTGCCACAGTCTCCCCGTTTGCCTCGTATGAAAAAGCTAAGGAAGTTGAGGAGTTCTTTGCAAGCCGTGTTAAGCCATCGATGGCCCGAACGTTGAAGCAGAGCATCGAGCGTGTTCACATTAATTCGAGATGGGTTCAGAGCGTCCAGAAGGAGACTACTCTTCCCGATGCTATAAGAGAGCTAGCGTGGAGGCGATATTAGGTTTCTGAATGTGAAGCATCTTTGAAAATAAGCCTCCTGGTAATGTAACAGTTTATTAGATTTATGAACTCCAAACAAATCCCCCCCAATCCCATAATAAAGTAGAATAATCATCCGTTCTCTTTCGTCTGTCTGCTTGCCCCTAGAAAATAGGCTCGACTTTGGTCGCACAATTAAAATAATTGAAGATAAAGCCATTTTTCTTTGAGGTTAATTGTA 2646 41.12 MVKYVNGKGVIGSFNKFQLTQTYTTFLILSTYEHNGEKKNMAVTQFEPVDARRCFPCWDEPAFKATFKITLDVPSELIALSNMPIIEEKVNGHLKTVSYQESPIMSTYLVAIVVGLFDYVEDHTTDGVKVRVYCQVGKANQGKFALHVAVKTLDLYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLATDSLFPEWKVWNQFLEESNHGLTLDGLAESHPIEVEINHASEVDEIFDAISYRKGASVIRMLQSYLGADCFQKSLAAYIKKHSCSNTKTEDLWAALEEGSGEPVNNLMSSWTKQQGYPVVTVKVKDEKLVFEQSRFLSSGSCGEGQWIVPITLCCGSYDVRKNFLLQTKTESVDIKEFLGCSISKYSGGNDKYCDWIKLNVDQTGFYRVKYDEDLAAKLRNAIEKNHLTPTDRFGILDDAFALSMACQQSVASLLTLMGAYREELDYTVLSNLISISYKLERIAADAVPELLDNLRQFFTNIFQFAAEKLGWDPKPDESHLDAMLRGELLTALALFGHEQTIKEANRRCLAFLDDRSTPVLPPDIRKAAYVAVMQTVNASNRSGYESLLRIYRESDLSQEKTRILSSLASCPDPNIILEVLNFLLSSEVRSQDAVFGLGVNWQARETAWTWLKTKWEEISKIFDSGFLIGRFVSATVSPFASYEKAKEVEEFFASRVKPSMARTLKQSIERVHINSRWVQSVQKETTLPDAIRELAWRRY 789
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 80028577 80040321 + XM_039043831.1 Bhi09g03122 45739

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03122 789 PANTHER AMINOPEPTIDASE 24 785 - -
Bhi09g03122 789 Pfam ERAP1-like C-terminal domain 445 762 IPR024571 -
Bhi09g03122 789 Gene3D tricorn interacting facor f3 domain 10 117 IPR042097 -
Bhi09g03122 789 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 124 371 - -
Bhi09g03122 789 Gene3D - 462 776 - -
Bhi09g03122 789 Pfam Peptidase family M1 domain 144 360 IPR014782 GO:0008237|GO:0008270
Bhi09g03122 789 Gene3D Neutral Protease Domain 2 118 365 IPR027268 -
Bhi09g03122 789 CDD M1_APN-Q_like 30 362 IPR034016 -
Bhi09g03122 789 PANTHER PROTEASE M1 ZINC METALLOPROTEASE 24 785 - -
Bhi09g03122 789 Gene3D - 366 460 - -
Bhi09g03122 789 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 27 115 IPR042097 -
Bhi09g03122 789 Pfam Peptidase M1 N-terminal domain 27 109 IPR045357 -
Bhi09g03122 789 PRINTS Membrane alanyl dipeptidase (M1) family signature 52 67 IPR001930 GO:0006508
Bhi09g03122 789 PRINTS Membrane alanyl dipeptidase (M1) family signature 99 114 IPR001930 GO:0006508
Bhi09g03122 789 PRINTS Membrane alanyl dipeptidase (M1) family signature 177 187 IPR001930 GO:0006508
Bhi09g03122 789 PRINTS Membrane alanyl dipeptidase (M1) family signature 213 228 IPR001930 GO:0006508
Bhi09g03122 789 PRINTS Membrane alanyl dipeptidase (M1) family signature 232 244 IPR001930 GO:0006508
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03122 K08776 NPEPPS; puromycin-sensitive aminopeptidase [EC:3.4.11.14] - csv:101215753 1437.17
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g03122 Bhi-Chr9:80028577 Bhi12g00279 Bhi-Chr12:8119937 4.48E-21 dispersed
Bhi09g03121 Bhi-Chr9:80027554 Bhi09g03122 Bhi-Chr9:80028577 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g119 Blo01g01456 . Bda01g00630 . . Bpe02g00498 . . . . Cma01g01717 . . . . . . . . . . . . . Cla05g01851 Cam05g1975 Cec05g1988 . Clacu05g1968 Cmu05g1849 Cre05g1973 Cone4ag1679 Cone7ag1273 . . Lsi04g01408 . . . . . . . . . . . . Cmo01g01794 . . . Car01g01333 . . Cpe02g00276 Bhi09g03122 . . . Hepe01g1902 Mch11g0434 . . . . . . . . . . . Cme07g00203
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001781 2 8 2 2 1 2 2 2 3 3 2 2 2 3 2 2 2 2 2 2 3 2 2 2 2 2 3 1 2 2 69