Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03139 TTGAAATTCAAATGCGAAGCGTTCGTTGGTTATCGATGAATCTCACTTCAATACTCCACTTTCCCTCAAAACTAAACTAAACCCATCTCTCTCTCTCCCCACCACCCACAAAGTTTTTAAATTTTTGGATTTCAGTTGTTAGAGTGCAACATTTTCCCCCTAATACCCAAAAAGCCTGGAAATTTTCTCTTTTTTTCTGTCCTTAAGACACCACTGCTTCTAAAGTTTTGACTATTTGATCTCCATCATTTTTGGCTTTCATTTAATACTCATTGCTCTGTTTCCTCTCTGATTTGATGGGGGGTTCTGCGAAATGGATGAAGGTTTTCATAGGACAGAAGAAGTCTGAAAAGGAAGACAATGAGAAGTTGGGTAATACTAAAACTAAGAAATGGAGGCTATGGAGAAGCCCATCAGGGGATTTGAGCTCTGCTTGGAAAGGTTATAAAGGGGGACATAAAGCAGCTTCTGAAGGCTCTGATTCTCCTAGAGCGGCTGATTCTTTTACGGCCGCCGTCGCCACTGTCCTCCGTGCTCCGCCGAGGAATTTTAAGGCTGTCCGCCAAGAATGGGCTGCAATTAGGATTCAAACTGCATTTCGTGGTTTCTTGTCTAGGAGGGCTCTTAGGGCCTTGAAGGGAGTGGTGAGGCTTCAAGCTCTGGTGAGGGGTCGTTTGGTGAGGAAGCAGGCAGCTGTTACACTGAGGTGCATGCAGGCTCTGGTTCGAGTCCAAGCTCGAGTCAGGGCACGTCGTGTGAGGATGTCAGTCGAGGGGCAGGCTGTGCAGCAATTGCTTAACGTACATCGCAGCAAGGCTGATCTCTTGAAGCAAGCTGAGGAAGGTTGGTGTGATAGCAAAGGGACATTGGAAGATATCAAATCTAAGTTACAAATGAGGCAAGATGGAGCATTTAAGAGGGAGAGAGCAATTGCTTACTCTCTTGTTCAAAAGCAATTGAAGGCAACACCAAACTCAACTTCACGAACAAATGCTTCAATTTACGCCCTTAAGAGTTACGAGTTCGACAAGAACAATTGGGGATGGAGTTGGTTGGAGAGATGGATGGCAGCGAAGCCATGGGAGACGAGGTTGATGGAACAATCCCGCACAGAATCATTTGAGGTCACTCCGCCTTCAAAGAGCTGTATCGAGTCTGTTGTGTCTAAACATTCCAAAGGTTCTGAACCAAGTTTAGTGAAAGTCAGGAAGAACAATGTATCAACTAGGATTTCTGCTAAACCTCCCTCAAGTGGGCAAACTCGTTCTTGTTCTAGCCCAAGTTCTGATTTCTGGTATGATGAAAGTTCTGCTTCATCTTCAATCTGTACGTCGACAACTCCCGCGTCGGGGCATGCTTTCTCAACCGCTGAAAGAACAGAGAATGGCAGTTACAGTAGGCCGAGTTACATGAACCTTACAGAGTCAACAAAGGCGAAACAAAAAACAAATAGTCACTTATCACACCGAGTTCAAAGGCAGTCCATGGATGAGTATCAATTCCTTCAGAAGTCAGCAGCTTTCTCAAATGGGGATTCTAAGAGCAGTGCTGGCTCTGATTCATCAGTCAATCCCTTTAAGCCATTGATGCTGCCAACACGATTGGATAAGAATGGAACAAAGTTAAGATCATGAGCAATTACACAGAGGCTCGCTTAATCAAATCAGCTTTGAGATTGAAACATGTTTCTGGTAATTCTAGAAGAGTTCTGCACCGCCTTATTTCTTAATTCCTGCCATCCAAATTGTGTATCATTCGAAAGAGTTGATATTTGTTTCATGTCCAATGGAGAATGGCTCGTTCTTTGTATTA 1812 44.09 MGGSAKWMKVFIGQKKSEKEDNEKLGNTKTKKWRLWRSPSGDLSSAWKGYKGGHKAASEGSDSPRAADSFTAAVATVLRAPPRNFKAVRQEWAAIRIQTAFRGFLSRRALRALKGVVRLQALVRGRLVRKQAAVTLRCMQALVRVQARVRARRVRMSVEGQAVQQLLNVHRSKADLLKQAEEGWCDSKGTLEDIKSKLQMRQDGAFKRERAIAYSLVQKQLKATPNSTSRTNASIYALKSYEFDKNNWGWSWLERWMAAKPWETRLMEQSRTESFEVTPPSKSCIESVVSKHSKGSEPSLVKVRKNNVSTRISAKPPSSGQTRSCSSPSSDFWYDESSASSSICTSTTPASGHAFSTAERTENGSYSRPSYMNLTESTKAKQKTNSHLSHRVQRQSMDEYQFLQKSAAFSNGDSKSSAGSDSSVNPFKPLMLPTRLDKNGTKLRS 445
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 80518414 80520656 + XM_039040214.1 Bhi09g03139 45756

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03139 445 MobiDBLite consensus disorder prediction 389 424 - -
Bhi09g03139 445 MobiDBLite consensus disorder prediction 345 382 - -
Bhi09g03139 445 PANTHER IQ-DOMAIN 5-RELATED 1 440 - -
Bhi09g03139 445 MobiDBLite consensus disorder prediction 286 326 - -
Bhi09g03139 445 ProSiteProfiles IQ motif profile. 114 141 IPR000048 GO:0005515
Bhi09g03139 445 MobiDBLite consensus disorder prediction 345 445 - -
Bhi09g03139 445 Pfam IQ calmodulin-binding motif 114 131 IPR000048 GO:0005515
Bhi09g03139 445 Pfam IQ calmodulin-binding motif 92 111 IPR000048 GO:0005515
Bhi09g03139 445 SMART iq_5 112 133 IPR000048 GO:0005515
Bhi09g03139 445 SMART iq_5 89 111 IPR000048 GO:0005515
Bhi09g03139 445 ProSiteProfiles IQ motif profile. 90 118 IPR000048 GO:0005515
Bhi09g03139 445 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 440 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03139 - - - csv:101210019 822.387
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g01384 Bhi-Chr2:36090725 Bhi09g03139 Bhi-Chr9:80518414 3.24E-60 dispersed
Bhi02g01385 Bhi-Chr2:36091039 Bhi09g03139 Bhi-Chr9:80518414 3.24E-60 dispersed
Bhi09g03139 Bhi-Chr9:80518414 Bhi06g00668 Bhi-Chr6:15674751 7.88E-49 dispersed
Bhi09g00370 Bhi-Chr9:7683296 Bhi09g03139 Bhi-Chr9:80518414 1.43E-82 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi06g00669 . 1 479 IQD Protein Family AT3G52290 54.2 5.3e-102 369.0
Bhi06g00668 . 1 479 IQD Protein Family AT3G52290 54.2 5.3e-102 369.0
Bhi02g01384 . 1 408 IQD Protein Family AT3G22190 57.5 1.5e-96 350.9
Bhi02g01383 . 1 408 IQD Protein Family AT3G22190 57.5 1.5e-96 350.9
Bhi02g01385 . 1 408 IQD Protein Family AT3G22190 57.5 1.5e-96 350.9
Bhi09g03139 . 1 438 IQD Protein Family AT2G26180 61.6 9.3e-120 427.9
Bhi03g00330 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00327 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00326 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00329 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00328 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00324 . 4 223 IQD Protein Family AT2G33990 57.6 5.8e-59 225.3
Bhi03g00323 . 4 223 IQD Protein Family AT2G33990 57.6 5.8e-59 225.3
Bhi03g00325 . 4 223 IQD Protein Family AT2G33990 57.6 5.8e-59 225.3
Bhi01g03276 . 83 266 IQD Protein Family AT2G33990 53.5 1.6e-48 190.7
Bhi01g03276 . 86 259 IQD Protein Family AT3G15050 62.7 8.5e-55 211.5
Bhi03g00330 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00327 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00326 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00329 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00328 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00324 . 5 181 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00323 . 5 181 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00325 . 5 181 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi12g01121 . 124 476 IQD Protein Family AT5G13460 52.1 9.4e-78 288.5
Bhi12g02233 . 1 508 IQD Protein Family AT4G00820 51.3 2.8e-113 406.8
Bhi12g02232 . 1 509 IQD Protein Family AT4G00820 51.2 3.7e-113 406.4
Bhi01g00618 . 1 466 IQD Protein Family AT4G00820 50.5 1.1e-104 378.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005507 1 1 2 1 2 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 2 1 1 1 1 1 3 1 1 39