Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03143 TTTTAAAAAAATTAATAATAAATTGAAATAATTGGTATTGAGAAAGGAAATGGGCCTTTTTTCTTTTTTGGTTTTGTACTGAAAGCTTGTTTGGTTTTAGGCTTTTAGCAGGAGGCAGCAGGAAAGTTTGTTGAAAACATTCAAGAGGCCAGTGTTGAATTTAATGAAGTGAAAGAGGATGATGATGATGATGATGAAAGGCAATTTAATGGTGGATGAGAGTTTGTCAGTCTTGACTTGTACATCTGGAGAAATATTAACAAGAAATGAAATTACCACCACTGGCCCTATGTATTCTCATCAATCCTCTGCTTCCACAAATCAACCGCTACCGCTACCGCCATCGCCACTGCCACCGCCACCGTCAAAGAGGAAGCGAAATCTTCCCGGCAACCCAGACCCAGAAGCTGAAGTGATAGCCTTGTCACCAAAATCGCTTCTGGCAACGAATAGATTCATATGTGAGATCTGTAAGAAAGGGTTTCAAAGAGATCAGAATTTGCAACTCCATAGAAGAGGACACAATCTACCATGGAAGCTAAAGCAAAGAGGCAACAAGGAAGTGAGGAAGAAGGTGTACGTGTGCCCCGAACCGACCTGCGTGCACCATCACCCGTCGAGGGCTCTTGGAGATCTAACCGGGATCAAGAAGCACTTCTGCAGAAAGCATGGCGAGAAGAAGTGGAAATGTGAAAAGTGTTCAAAGAGATATGCAGTTCAATCAGATTGGAAAGCTCACTCCAAGATTTGTGGCACTAAAGAGTATAGATGTGACTGTGGAACCCTCTTCTCTAGGAGGGACAGTTTCATAACCCACAGAGCATTCTGCAATGCCTTGGCTCAGGAAAGTACCAATTTTAATAATAATAATCCAACTCCAAAAACATCCCTTAATTTCCCATCTATTTCCCCTCATTTTCCTCTTAAATTTGAACACCAAGACCCTTTCTTTCCTTCTTCTCAAAACCCTAATAACCCTACTTCAATCGGATTCGGGTTACCGGGTCCGGGTCCGGGGCCGGGGCAACCTTTTGCTTCTTGTCCTGCATGGGAATTGAATAATAATCATAATAATAATAATTCATGTCCTGCTGAAATTGCCCCACTTTTTCATCACGTGATGGGTTTTGAAGAGGCCTCGTTTGAAGAAGCTCTCAATGGGATACTGATGAATAATAATAATAGAGGTAATAATAAAGACGGTGGCAAAAACGGTGGCGCCGCCGCTGCCGGAGACATAACGAGGGATTTTCTTGGGCTGAGACCGGTGGCGGGTAACCAGCCGGATCATCCTATATTTCAGAATCATGAGATGATAAATAACGACATGTCGAATTTGGATTCTCCTTCTCCTTCGACATTTGGATTGCACCAGAACCAGAACACGACATGTTGGCGTCATAATTAGTTGTTTTTGTTTTGTTTTTTTTTTGTTTAATTAAGGTGGGATCAAACGGGGGACTGGACGGTGAAAAAGTGTATGTATTTTTGAGGTATTTTCATGCAACAATCTTCGCTTTGGTCTGAATTCTCTCTCTACATTACTTTTTATTCACAATAAATTTAAAAAGGTCATTAATTATGATCATCTTAAACAGTA 1600 41.25 MMMMMMKGNLMVDESLSVLTCTSGEILTRNEITTTGPMYSHQSSASTNQPLPLPPSPLPPPPSKRKRNLPGNPDPEAEVIALSPKSLLATNRFICEICKKGFQRDQNLQLHRRGHNLPWKLKQRGNKEVRKKVYVCPEPTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKICGTKEYRCDCGTLFSRRDSFITHRAFCNALAQESTNFNNNNPTPKTSLNFPSISPHFPLKFEHQDPFFPSSQNPNNPTSIGFGLPGPGPGPGQPFASCPAWELNNNHNNNNSCPAEIAPLFHHVMGFEEASFEEALNGILMNNNNRGNNKDGGKNGGAAAAGDITRDFLGLRPVAGNQPDHPIFQNHEMINNDMSNLDSPSPSTFGLHQNQNTTCWRHN 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 80582465 80585084 + XM_039043276.1 Bhi09g03143 45760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03143 409 Gene3D Classic Zinc Finger 89 116 - -
Bhi09g03143 409 PANTHER PROTEIN INDETERMINATE-DOMAIN 7 39 234 - -
Bhi09g03143 409 SUPERFAMILY beta-beta-alpha zinc fingers 92 189 IPR036236 -
Bhi09g03143 409 MobiDBLite consensus disorder prediction 35 49 - -
Bhi09g03143 409 ProSitePatterns Zinc finger C2H2 type domain signature. 95 115 IPR013087 -
Bhi09g03143 409 MobiDBLite consensus disorder prediction 35 77 - -
Bhi09g03143 409 MobiDBLite consensus disorder prediction 383 409 - -
Bhi09g03143 409 MobiDBLite consensus disorder prediction 50 68 - -
Bhi09g03143 409 Gene3D Classic Zinc Finger 162 230 - -
Bhi09g03143 409 SMART c2h2final6 93 115 IPR013087 -
Bhi09g03143 409 SMART c2h2final6 169 189 IPR013087 -
Bhi09g03143 409 ProSiteProfiles Zinc finger C2H2 type domain profile. 93 115 IPR013087 -
Bhi09g03143 409 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 39 234 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g03143 Bhi-Chr9:80582465 Bhi09g03145 Bhi-Chr9:80582602 0 dispersed
Bhi09g03143 Bhi-Chr9:80582465 Bhi09g03144 Bhi-Chr9:80582473 0 tandem
Bhi08g01969 Bhi-Chr8:56800257 Bhi09g03143 Bhi-Chr9:80582465 4.63E-72 transposed
Bhi09g00372 Bhi-Chr9:7784090 Bhi09g03143 Bhi-Chr9:80582465 3.56E-107 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2005 None None None None Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03143 K25870 - csv:101215280 589.726