Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03182 CCCAAACTAAAAAATAAAAATAAAAATCCAGTAGAGCTGCTAAATTCTCAGCTTTGAGACTTTGTTACATATTTTTCATTTTTCATTTTTCAATTTTTTTTTCTATCTCCACGTGAAATCCGACATCTCTTCATCTTCTTCTTCCTCGGCCATGTCCCTTCCATGCAATAGATTCACTTCAAAACCTCCTTAAAAATTCCGATTCTTTAAAGAAAGCTTCTTAATTGCCCACATCCATTTGTGAAAAGAAAAATGGTCTGTCCTTCATCATAAGCTTCTTCTTCTTCCCGGCGAGTTCGAAGGCCACGTGACAGCGGCGATTCCAAATTAGGGTTTTTTTTAATTTTTTTTTTTTTTTTTTTAGTTTTGGTTTAGAATTAGGGCTTTGAAGTGAGAAAAAAGAAATGGAAGAATATAATAATGATGTAAATGAGAACTCAAATGGGAGAGGGAATTTCTTGTATGGATCAGGGAATTCTTCATCAGGTAATTTTGGAAGATCAACGGCTGAGATGGGTGTTAATACTTTTCATCTTCAACAAGAAACCGACTGTTTTCAAACAACTCATCAGATTGTGAAGACTGAAGCTACTACTTCACACCACCAGCTTCTCAAATTTCATTACCCTGTAATCCGACAACCACCACCACCACCAGCTCAGCCGCCAACGACATGTCGGCCTGAACAAAACGGTGCCGTTGATGTTGAAGCTATTAAGGCTAAAATCCTTGCTCATCCTCAATACTCTAGCCTACTCGAAGCCTACATGGAATGTCAGAAGGTGGGTGCTCCGCCACAAGTGGTGGAGCGGCTGATGGCGGCCCGGCAAGAATTTGAAGCACGGCAGCGATCTTCCATGGTTTCCGGAGAGACCACGAAGGATCCAGAACTTGATCAATTCATGGAAGCTTATTACGACATGTTGGTGAAATATCGGGAAGAACTTTCAAGGCCGATTCAGGAAGCCATGGATTTCATGCGAAGGATTGAATCTCAGCTCACTTCTCTCTGTAACGGACCAGTTCGGATCTTCAATTCTGATGAGAAGTGTGAAGGTATCGGGTCGTCTGAGGACGAACAAGAAAACAGCGGCGGAGAAACTGAACTACCAGAGATCGATCCACGTGCTGAAGATAGAGAATTAAAGAACCATCTACTGAGGAAGTACAGTGGTTACTTGAGCAGTCTCAAGCAAGAACTTTCTAAGAAAAAGAAAAAAGGAAAACTCCCAAAAGATGCAAGGCAAAAGCTCCTTAATTGGTGGGAGTTACATTACAAATGGCCATACCCTTCGGAGACAGAGAAAGTGGCATTGGCTGAATCCACTGGGTTGGATCAGAAACAAATAAACAATTGGTTCATAAACCAAAGGAAAAGACACTGGAAACCTTCTGAAGATATGCAATTCATGGTGATGGATGGTATTCATCCTCCCAATGCCGCGCTCTATATCGACAGTCACTATATGACCGATGGCCATTATCGGCTCGGACCATGACTGACCGTAAATGTTACTAAAAGTGTCTGCAGATTTGCTATGAATTCAACAAGGTTAATTCCTTTCTATAATACCAATCAAATAGTGTGACAAATAATAATGATATATGTGTGATTTTAAGGGATGATATATGCTCAAGTGTTATCTTTCCTTTTTTTTCTTTCCTACATTATATTCAAGCCTGCTTGGATAAATTTAGCTCTAGTTTCAATTATCAGAAGGTATATAACTACTCAAAGTAGTTGATATTTTATGGAAGCTACACAGAAGGGAGGTTTTTCTTTTTTCCTTTTTCAATTTACTTTGAGTTTTTT 1813 39.55 MEEYNNDVNENSNGRGNFLYGSGNSSSGNFGRSTAEMGVNTFHLQQETDCFQTTHQIVKTEATTSHHQLLKFHYPVIRQPPPPPAQPPTTCRPEQNGAVDVEAIKAKILAHPQYSSLLEAYMECQKVGAPPQVVERLMAARQEFEARQRSSMVSGETTKDPELDQFMEAYYDMLVKYREELSRPIQEAMDFMRRIESQLTSLCNGPVRIFNSDEKCEGIGSSEDEQENSGGETELPEIDPRAEDRELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGIHPPNAALYIDSHYMTDGHYRLGP 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 81520335 81524814 + XM_039043531.1 Bhi09g03182 45799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03182 364 SMART HOX_1 268 333 IPR001356 GO:0003677
Bhi09g03182 364 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 356 - -
Bhi09g03182 364 MobiDBLite consensus disorder prediction 1 20 - -
Bhi09g03182 364 Pfam KNOX2 domain 157 203 IPR005541 GO:0003677|GO:0005634
Bhi09g03182 364 SMART KNOX2_2 153 204 IPR005541 GO:0003677|GO:0005634
Bhi09g03182 364 SMART KNOX1_2 102 146 IPR005540 GO:0003677|GO:0005634
Bhi09g03182 364 ProSitePatterns 'Homeobox' domain signature. 304 327 IPR017970 GO:0000981|GO:0006355
Bhi09g03182 364 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 1 356 - -
Bhi09g03182 364 ProSiteProfiles 'Homeobox' domain profile. 266 329 IPR001356 GO:0003677
Bhi09g03182 364 SUPERFAMILY Homeodomain-like 267 342 IPR009057 -
Bhi09g03182 364 MobiDBLite consensus disorder prediction 214 242 - -
Bhi09g03182 364 ProSiteProfiles ELK domain profile. 246 266 IPR005539 GO:0003677
Bhi09g03182 364 Pfam Homeobox KN domain 286 325 IPR008422 GO:0003677|GO:0006355
Bhi09g03182 364 Pfam KNOX1 domain 103 145 IPR005540 GO:0003677|GO:0005634
Bhi09g03182 364 Pfam ELK domain 246 267 IPR005539 GO:0003677
Bhi09g03182 364 Gene3D - 271 333 - -
Bhi09g03182 364 CDD homeodomain 278 330 IPR001356 GO:0003677
Bhi09g03182 364 SMART ELK_2 246 267 IPR005539 GO:0003677
Bhi09g03182 364 SMART ELK_2 162 182 IPR005539 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi04g00474 Bhi09g03182 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00475 Bhi-Chr4:12094223 Bhi09g03182 Bhi-Chr9:81520335 1.59E-136 dispersed
Bhi04g00662 Bhi-Chr4:15681009 Bhi09g03182 Bhi-Chr9:81520335 8.07E-75 dispersed
Bhi05g01372 Bhi-Chr5:47748136 Bhi09g03182 Bhi-Chr9:81520335 3.62E-84 dispersed
Bhi05g01373 Bhi-Chr5:47748136 Bhi09g03182 Bhi-Chr9:81520335 3.62E-84 dispersed
Bhi06g01506 Bhi-Chr6:45026591 Bhi09g03182 Bhi-Chr9:81520335 8.51E-72 dispersed
Bhi07g01752 Bhi-Chr7:48154438 Bhi09g03182 Bhi-Chr9:81520335 2.36E-84 dispersed
Bhi04g00474 Bhi-Chr4:12094223 Bhi09g03182 Bhi-Chr9:81520335 2.11E-107 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2010 PF03791 KNOX2 3.30E-25 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03182 - - csv:101213104 644.81