Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03183 GAGTCCCCACAATCCCATTTCCAACCTAAGAAACTTCCGCTCTCTTTCTCCCCCTTTTCATTTTTTTTCCCTTTATATTTCCCCCCCAGAAGTTTACTGGGTTTTCATTTTTCGCCATTTAGTTCTTTTATTTTTCAAATAATGGAGAGGGATTGCAACACGGGGCTTCTTCTTGGGCTGGGGCGGGTTTCAGCTGATGATTCTATGCGGTCGATCGTACCACCGGAAGTCGCCGGTGTGAAGAAGAAGCTGCAGGTTTTGAAGTTTGATGATATTTTGCCTTCTTTAACGCTTGGATTGTCGATTGTAGTCGAGAAGAGCGGCGGCGTTGCGACGGAGGAGTTGAATCAGCGGGGTTGTTCGGGTAGTCCGGTGTCGTCGTTTTCAAATTCATCGGGCTTTAAGAGGGAGCGAGACGGCGGCGGTGGCGGTGGTGGTGAAGAGGCGGAGGCGGAGGAGTATATGGAGAGGGTGTGTATGAAAGTGGGTGAGGAAGATGAAGATGGAAGTCCGAGGAAGAAACTAAGACTAACGAAACAACAATCCGCCATTTTAGAGGATAACTTCAAAGAACACTCAAGTCTCAGTCCTAAGCAAAAGCAGGATTTGGCTAAACAGTTAAACCTAAGGCCAAGACAAGTGGAAGTATGGTTTCAAAACAGAAGAGCCAGAACAAAGCTGAAGCAAACAGAAATGGACTGTGAATTATTGAAGAAATGCTGTGAAAAGCTGAAAGAAGAAAACACAAGGCTTCAAAAGGAACTTCAAGAGCTTAAATCACTCAAATTAACGGCTCCGCCGTTCTGCATGCAATTACAAGCCGCCACTCTCACCGTTTGCCCTTCATGTGAAAGCTCCATTTGCGGCGGCGGCGGCGGCGGCGATGCATCTCCGGCCAATACTTTCTCAATTGTGTCAAAGCCTCAATTTCTCAAATTCCCATTTAACCACCCATCGGCGGCTTGTTAGGCGGCAGCCTAATTTTAATTATAATAATATCGTTAATTAAAACGACCTGAAGACTGCTATTTTTCCTTGGGGCTTCTTGGTCAAAAAATTATATATCGTATATAACACTGATATTTATATATTTAATATGTTATATGTACAAATATATTGTTGTGTTTTGAACACATTGGAAATTAGGCTTTGTAGAAATCGATCTATGATGACATGACACACATGTATTTAAGTTTCCATTAATTTTATTTTACTTGGAGCATTGGAGGCT 1231 43.14 MERDCNTGLLLGLGRVSADDSMRSIVPPEVAGVKKKLQVLKFDDILPSLTLGLSIVVEKSGGVATEELNQRGCSGSPVSSFSNSSGFKRERDGGGGGGGEEAEAEEYMERVCMKVGEEDEDGSPRKKLRLTKQQSAILEDNFKEHSSLSPKQKQDLAKQLNLRPRQVEVWFQNRRARTKLKQTEMDCELLKKCCEKLKEENTRLQKELQELKSLKLTAPPFCMQLQAATLTVCPSCESSICGGGGGGDASPANTFSIVSKPQFLKFPFNHPSAAC 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 81541385 81543782 - XM_039042958.1 Bhi09g03183 45800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03183 275 Pfam Homeodomain 125 179 IPR001356 GO:0003677
Bhi09g03183 275 ProSitePatterns 'Homeobox' domain signature. 156 179 IPR017970 GO:0000981|GO:0006355
Bhi09g03183 275 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT9 7 275 - -
Bhi09g03183 275 MobiDBLite consensus disorder prediction 68 104 - -
Bhi09g03183 275 PANTHER - 7 275 - -
Bhi09g03183 275 SMART HOX_1 123 185 IPR001356 GO:0003677
Bhi09g03183 275 MobiDBLite consensus disorder prediction 68 87 - -
Bhi09g03183 275 Gene3D - 116 186 - -
Bhi09g03183 275 ProSiteProfiles 'Homeobox' domain profile. 121 181 IPR001356 GO:0003677
Bhi09g03183 275 Pfam Homeobox associated leucine zipper 181 214 IPR003106 GO:0006355|GO:0043565
Bhi09g03183 275 SMART halz 181 224 IPR003106 GO:0006355|GO:0043565
Bhi09g03183 275 Coils Coil 180 217 - -
Bhi09g03183 275 CDD homeodomain 124 182 IPR001356 GO:0003677
Bhi09g03183 275 SUPERFAMILY Homeodomain-like 122 189 IPR009057 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g03183 Bhi-Chr9:81541385 Bhi11g00845 Bhi-Chr11:24361169 1.00E-67 dispersed
Bhi03g01084 Bhi-Chr3:22004589 Bhi09g03183 Bhi-Chr9:81541385 7.37E-68 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2011 PF00046 Homeodomain 2.10E-17 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03183 K09338 - csv:101212868 350.132