Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03193 TGCCCTTCATAAACTCCTAGATTTAGCAACCTTCTGTAATTGGAGAGAGAGAGTCTCAAAAGCCATTGAAGGTGGCCAATAATGTTTCAAAACTCTTCAGCATTAAGGGGAAATTGGGTGCTTTTTAGAACAGTAAATCAAAAACACAAGAAACTTTTACATAAGTAGACAACTAGAGTTAGTAAGAGAAATGGACATGGAAACTAGTTCTGAGCCTCAACAACATTCTCACTACCAGCACCAAAGCCAGGCAATTTCAGCAGTAGCTGTCTCTAATACCATGTCAAATAGCTTCTTAGCTTCTCACCATTACAATGGAGATTTTCTTTCTCCTTTGTCTGTAATGCCACTCAAGTCAGATGGGTCTCTTTGTATCATGGAATCAATCAGCACATCACAATCTGAAGAAATATTGCCAGATATCTCACCAAAACTGGAGGATTTTCTTGGTGGTGTAACTCATGGAAAAGAGGCCACAGCACTAAGCTTAGACAGCATATATTACAATCAAAATGCCGAGACTGATTCAGAGAGACAACATTCTTTGAATCTTTTTAAGCAACAAGAACAACAACATATTCTTTTTCATTCTCAGCTATATTATTCTGGAACGTTCCATTATCCTGCTGAGGATCCCAACAAGAAGTCTCACATTGCATGCTCTTGTTCTGAAATTCGACAAGATATGGAGCAGCGGATCAATGGCTGCTGCTTTGTAGGGATGAATTCCCAAGACTTGCAGCCACTTAGATTGTCCATGAGTCCTGGTTCTCAGTCTAGTTGTGTTACTGCTCCAAGCCAAATTTCTCAACCTGGACCAGCCACCATGGAAACAAAGAAAAGGGGTCTGGCCAGTCAAAAGCAGCCGGTCTATCGGAAGTCGATCGACACGTTCGGACAAAGAACTTCACAGTACAGAGGTGTTACGAGGCATAGATGGACTGGTAGATATGAGGCTCATTTGTGGGATAATAGTTGTAAGAAAGAAGGTCAAACCAGGAAAGGAAGACAAGTTTATCTCGGTGGCTATGATATGGAGGAGAAAGCAGCAAGAGCTTATGATCTTGCAGCTCTCAAGTACTGGGGACCCTCCACACATTTAAACTTCCCGTTAAAGAACTATCAACTTGAAATTGAGGAAATGAAGAACATGAACCGCCAAGAATATGTCGCGCACCTGAGAAGGAAAAGCAGTGGATTCTCCAGGGGAGCTTCCATATACAGAGGAGTAACTAGACATCATCAGCATGGGAGATGGCAAGCTCGGATCGGGAGAGTTGCTGGGAATAAAGACCTCTATCTTGGAACATTTGGCACACAAGAGGAAGCTGCAGAAGCATATGACATAGCAGCTATCAAGTTCCGCGGTGCAAACGCCGTTACAAACTTTGACACGTCAAGGTACGATGTAGAAAGGATCATAACAAGCAGTAGCCTCCTTTCGGGAGAGTTTGCGAGACGAAACAAAGAACAAAAACCAACCAACACCATCGAACATAAAGAACCAAAACAGAACATCGCTCAAACTGAAGACCCCTCAGAGATATCAAACAACTTAGATTGGAGGACGGTATTCCACAACAACCTGCTGCTTGATCCAAGCGAAACTGTCGAAGCCATAGACCAAAAGTCCATGACATCAAGCGGATACATGAATCATGTAGTAGGAGTGGTCGAAACCGAAAGTTGTAATCAGGAAATGGTGAATGATTCAAGAAAGTACAAGGCTCACTTCCCCAATGCTTCCTCTGTAGTGAGCAGCCTGAGCAGCTCAAGGGAAACGAGTCCTGATAAATCAAATGCTTCATCCTCGGTGTTATTTGCAAAAGCCCCATTTGGAAGCAATGGAAGTAATTGGCTTCCATCACCACCCCAAATGAGGCCTGCTCTTATTTCTTTGCCTGTTTGGAATGATGCATGAGACAGCTTCTTTCCATGTTTTCTTTTCAATGTTTAGAAACATGTAATGAATTCTAATCCAAATCCAATCCAATCCACCTTGTT 2004 42.51 MDMETSSEPQQHSHYQHQSQAISAVAVSNTMSNSFLASHHYNGDFLSPLSVMPLKSDGSLCIMESISTSQSEEILPDISPKLEDFLGGVTHGKEATALSLDSIYYNQNAETDSERQHSLNLFKQQEQQHILFHSQLYYSGTFHYPAEDPNKKSHIACSCSEIRQDMEQRINGCCFVGMNSQDLQPLRLSMSPGSQSSCVTAPSQISQPGPATMETKKRGLASQKQPVYRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHLNFPLKNYQLEIEEMKNMNRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGANAVTNFDTSRYDVERIITSSSLLSGEFARRNKEQKPTNTIEHKEPKQNIAQTEDPSEISNNLDWRTVFHNNLLLDPSETVEAIDQKSMTSSGYMNHVVGVVETESCNQEMVNDSRKYKAHFPNASSVVSSLSSSRETSPDKSNASSSVLFAKAPFGSNGSNWLPSPPQMRPALISLPVWNDA 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 81862096 81865303 - XM_039041436.1 Bhi09g03193 45810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03193 576 MobiDBLite consensus disorder prediction 197 223 - -
Bhi09g03193 576 PRINTS Ethylene responsive element binding protein signature 242 253 IPR001471 GO:0003700|GO:0006355
Bhi09g03193 576 PRINTS Ethylene responsive element binding protein signature 383 403 IPR001471 GO:0003700|GO:0006355
Bhi09g03193 576 ProSiteProfiles AP2/ERF domain profile. 343 401 IPR001471 GO:0003700|GO:0006355
Bhi09g03193 576 Pfam AP2 domain 343 393 IPR001471 GO:0003700|GO:0006355
Bhi09g03193 576 Pfam AP2 domain 241 299 IPR001471 GO:0003700|GO:0006355
Bhi09g03193 576 ProSiteProfiles AP2/ERF domain profile. 241 307 IPR001471 GO:0003700|GO:0006355
Bhi09g03193 576 SMART rav1_2 241 313 IPR001471 GO:0003700|GO:0006355
Bhi09g03193 576 SMART rav1_2 343 407 IPR001471 GO:0003700|GO:0006355
Bhi09g03193 576 Gene3D AP2/ERF domain 343 403 IPR036955 GO:0003700|GO:0006355
Bhi09g03193 576 Gene3D AP2/ERF domain 240 309 IPR036955 GO:0003700|GO:0006355
Bhi09g03193 576 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 19 144 - -
Bhi09g03193 576 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 172 566 - -
Bhi09g03193 576 CDD AP2 342 403 IPR001471 GO:0003700|GO:0006355
Bhi09g03193 576 SUPERFAMILY DNA-binding domain 342 402 IPR016177 GO:0003677
Bhi09g03193 576 MobiDBLite consensus disorder prediction 422 449 - -
Bhi09g03193 576 CDD AP2 240 307 IPR001471 GO:0003700|GO:0006355
Bhi09g03193 576 MobiDBLite consensus disorder prediction 1 21 - -
Bhi09g03193 576 MobiDBLite consensus disorder prediction 422 444 - -
Bhi09g03193 576 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 172 566 - -
Bhi09g03193 576 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 19 144 - -
Bhi09g03193 576 SUPERFAMILY DNA-binding domain 240 308 IPR016177 GO:0003677
Bhi09g03193 576 MobiDBLite consensus disorder prediction 197 211 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g03193 Bhi-Chr9:81862096 Bhi09g03196 Bhi-Chr9:81862096 0 dispersed
Bhi09g03193 Bhi-Chr9:81862096 Bhi09g03194 Bhi-Chr9:81862096 0 tandem
Bhi01g02796 Bhi-Chr1:69548371 Bhi09g03193 Bhi-Chr9:81862096 4.90E-137 transposed
Bhi11g03021 Bhi-Chr11:82199153 Bhi09g03193 Bhi-Chr9:81862096 3.76E-09 transposed
Bhi03g01071 Bhi-Chr3:21679247 Bhi09g03193 Bhi-Chr9:81862096 4.11E-173 wgd
Bhi04g00456 Bhi-Chr4:11617614 Bhi09g03193 Bhi-Chr9:81862096 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2014 PF00847 AP2 1.30E-13 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03193 K09285 - csv:101212143 972.615