Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03195 TATACACGGATCCCTATGCATAGGGGCAAAAACACAAGAAACTTTTACATAAGTAGACAACTAGAGTTAGTAAGAGAAATGGACATGGAAACTAGTTCTGAGCCTCAACAACATTCTCACTACCAGCACCAAAGCCAGGCAATTTCAGCAGTAGCTGTCTCTAATACCATGTCAAATAGCTTCTTAGCTTCTCACCATTACAATGGAGATTTTCTTTCTCCTTTGTCTGTAATGCCACTCAAGTCAGATGGGTCTCTTTGTATCATGGAATCAATCAGCACATCACAATCTGAAGATATCTCACCAAAACTGGAGGATTTTCTTGGTGGTGTAACTCATGGAAAAGAGGCCACAGCACTAAGCTTAGACAGCATATATTACAATCAAAATGCCGAGACTGATTCAGAGAGACAACATTCTTTGAATCTTTTTAAGCAACAAGAACAACAACATATTCTTTTTCATTCTCAGCTATATTATTCTGGAACGTTCCATTATCCTGCTGAGGATCCCAACAAGAAGTCTCACATTGCATGCTCTTGTTCTGAAATTCGACAAGATATGGAGCAGCGGATCAATGGCTGCTGCTTTGTAGGGATGAATTCCCAAGACTTGCAGCCACTTAGATTGTCCATGAGTCCTGGTTCTCAGTCTAGTTGTGTTACTGCTCCAAGCCAAATTTCTCAACCTGGACCAGCCACCATGGAAACAAAGAAAAGGGGTCTGGCCAGTCAAAAGCAGCCGGTCTATCGGAAGTCGATCGACACGTTCGGACAAAGAACTTCACAGTACAGAGGTGTTACGAGGCATAGATGGACTGGTAGATATGAGGCTCATTTGTGGGATAATAGTTGTAAGAAAGAAGGTCAAACCAGGAAAGGAAGACAAGTTTATCTCGGTGGCTATGATATGGAGGAGAAAGCAGCAAGAGCTTATGATCTTGCAGCTCTCAAGTACTGGGGACCCTCCACACATTTAAACTTCCCGTTAAAGAACTATCAACTTGAAATTGAGGAAATGAAGAACATGAACCGCCAAGAATATGTCGCGCACCTGAGAAGGAAAAGCAGTGGATTCTCCAGGGGAGCTTCCATATACAGAGGAGTAACTAGACATCATCAGCATGGGAGATGGCAAGCTCGGATCGGGAGAGTTGCTGGGAATAAAGACCTCTATCTTGGAACATTTGGCACACAAGAGGAAGCTGCAGAAGCATATGACATAGCAGCTATCAAGTTCCGCGGTGCAAACGCCGTTACAAACTTTGACACGTCAAGGTACGATGTAGAAAGGATCATAACAAGCAGTAGCCTCCTTTCGGGAGAGTTTGCGAGACGAAACAAAGAACAAAAACCAACCAACACCATCGAACATAAAGAACCAAAACAGAACATCGCTCAAACTGAAGACCCCTCAGAGATATCAAACAACTTAGATTGGAGGACGGTATTCCACAACAACCTGCTGCTTGATCCAAGCGAAACTGTCGAAGCCATAGACCAAAAGTCCATGACATCAAGCGGATACATGAATCATGTAGTAGGAGTGGTCGAAACCGAAAGTTGTAATCAGGAAATGGTGAATGATTCAAGAAAGTACAAGGCTCACTTCCCCAATGCTTCCTCTGTAGTGAGCAGCCTGAGCAGCTCAAGGGAAACGAGTCCTGATAAATCAAATGCTTCATCCTCGGTGTTATTTGCAAAAGCCCCATTTGGAAGCAATGGAAGTAATTGGCTTCCATCACCACCCCAAATGAGGCCTGCTCTTATTTCTTTGCCTGTTTGGAATGATGCATGAGACAGCTTCTTTCCATGTTTTCTTTTCAATGTTTAGAAACATGTAATGAATTCTAATCCAAATCCAATCCAATCCACCTTGTT 1880 42.98 MHRGKNTRNFYISRQLELVREMDMETSSEPQQHSHYQHQSQAISAVAVSNTMSNSFLASHHYNGDFLSPLSVMPLKSDGSLCIMESISTSQSEDISPKLEDFLGGVTHGKEATALSLDSIYYNQNAETDSERQHSLNLFKQQEQQHILFHSQLYYSGTFHYPAEDPNKKSHIACSCSEIRQDMEQRINGCCFVGMNSQDLQPLRLSMSPGSQSSCVTAPSQISQPGPATMETKKRGLASQKQPVYRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHLNFPLKNYQLEIEEMKNMNRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGANAVTNFDTSRYDVERIITSSSLLSGEFARRNKEQKPTNTIEHKEPKQNIAQTEDPSEISNNLDWRTVFHNNLLLDPSETVEAIDQKSMTSSGYMNHVVGVVETESCNQEMVNDSRKYKAHFPNASSVVSSLSSSRETSPDKSNASSSVLFAKAPFGSNGSNWLPSPPQMRPALISLPVWNDA 593
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 81862096 81865046 - XM_039041435.1 Bhi09g03195 45812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03195 593 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 22 162 - -
Bhi09g03195 593 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 189 582 - -
Bhi09g03195 593 MobiDBLite consensus disorder prediction 214 228 - -
Bhi09g03195 593 Gene3D AP2/ERF domain 360 420 IPR036955 GO:0003700|GO:0006355
Bhi09g03195 593 Gene3D AP2/ERF domain 257 326 IPR036955 GO:0003700|GO:0006355
Bhi09g03195 593 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 189 582 - -
Bhi09g03195 593 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 22 162 - -
Bhi09g03195 593 MobiDBLite consensus disorder prediction 214 240 - -
Bhi09g03195 593 SUPERFAMILY DNA-binding domain 359 419 IPR016177 GO:0003677
Bhi09g03195 593 PRINTS Ethylene responsive element binding protein signature 259 270 IPR001471 GO:0003700|GO:0006355
Bhi09g03195 593 PRINTS Ethylene responsive element binding protein signature 400 420 IPR001471 GO:0003700|GO:0006355
Bhi09g03195 593 MobiDBLite consensus disorder prediction 439 461 - -
Bhi09g03195 593 MobiDBLite consensus disorder prediction 439 466 - -
Bhi09g03195 593 ProSiteProfiles AP2/ERF domain profile. 258 324 IPR001471 GO:0003700|GO:0006355
Bhi09g03195 593 Pfam AP2 domain 360 410 IPR001471 GO:0003700|GO:0006355
Bhi09g03195 593 Pfam AP2 domain 258 316 IPR001471 GO:0003700|GO:0006355
Bhi09g03195 593 SMART rav1_2 360 424 IPR001471 GO:0003700|GO:0006355
Bhi09g03195 593 SMART rav1_2 258 330 IPR001471 GO:0003700|GO:0006355
Bhi09g03195 593 ProSiteProfiles AP2/ERF domain profile. 360 418 IPR001471 GO:0003700|GO:0006355
Bhi09g03195 593 CDD AP2 359 420 IPR001471 GO:0003700|GO:0006355
Bhi09g03195 593 SUPERFAMILY DNA-binding domain 257 325 IPR016177 GO:0003677
Bhi09g03195 593 CDD AP2 257 324 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g03195 Bhi-Chr9:81862096 Bhi10g00331 Bhi-Chr10:7185763 6.74E-116 dispersed
Bhi09g03194 Bhi-Chr9:81862096 Bhi09g03195 Bhi-Chr9:81862096 0 tandem
Bhi09g03195 Bhi-Chr9:81862096 Bhi09g03196 Bhi-Chr9:81862096 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2016 PF00847 AP2 1.30E-13 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03195 K09285 - csv:101212143 962.214