Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03196 TATACACGGATCCCTATGCATAGGGGCAAAAACACAAGAAACTTTTACATAAGTAGACAACTAGAGTTAGTAAGAGAAATGGACATGGAAACTAGTTCTGAGCCTCAACAACATTCTCACTACCAGCACCAAAGCCAGGCAATTTCAGCAGTAGCTGTCTCTAATACCATGTCAAATAGCTTCTTAGCTTCTCACCATTACAATGGAGATTTTCTTTCTCCTTTGTCTGTAATGCCACTCAAGTCAGATGGGTCTCTTTGTATCATGGAATCAATCAGCACATCACAATCTGAAGAAATATTGCCAGATATCTCACCAAAACTGGAGGATTTTCTTGGTGGTGTAACTCATGGAAAAGAGGCCACAGCACTAAGCTTAGACAGCATATATTACAATCAAAATGCCGAGACTGATTCAGAGAGACAACATTCTTTGAATCTTTTTAAGCAACAAGAACAACAACATATTCTTTTTCATTCTCAGCTATATTATTCTGGAACGTTCCATTATCCTGCTGAGGATCCCAACAAGAAGTCTCACATTGCATGCTCTTGTTCTGAAATTCGACAAGATATGGAGCAGCGGATCAATGGCTGCTGCTTTGTAGGGATGAATTCCCAAGACTTGCAGCCACTTAGATTGTCCATGAGTCCTGGTTCTCAGTCTAGTTGTGTTACTGCTCCAAGCCAAATTTCTCAACCTGGACCAGCCACCATGGAAACAAAGAAAAGGGGTCTGGCCAGTCAAAAGCAGCCGGTCTATCGGAAGTCGATCGACACGTTCGGACAAAGAACTTCACAGTACAGAGGTGTTACGAGGCATAGATGGACTGGTAGATATGAGGCTCATTTGTGGGATAATAGTTGTAAGAAAGAAGGTCAAACCAGGAAAGGAAGACAAGTTTATCTCGGTGGCTATGATATGGAGGAGAAAGCAGCAAGAGCTTATGATCTTGCAGCTCTCAAGTACTGGGGACCCTCCACACATTTAAACTTCCCGTTAAAGAACTATCAACTTGAAATTGAGGAAATGAAGAACATGAACCGCCAAGAATATGTCGCGCACCTGAGAAGGAAAAGCAGTGGATTCTCCAGGGGAGCTTCCATATACAGAGGAGTAACTAGACATCATCAGCATGGGAGATGGCAAGCTCGGATCGGGAGAGTTGCTGGGAATAAAGACCTCTATCTTGGAACATTTGGCACACAAGAGGAAGCTGCAGAAGCATATGACATAGCAGCTATCAAGTTCCGCGGTGCAAACGCCGTTACAAACTTTGACACGTCAAGGTACGATGTAGAAAGGATCATAACAAGCAGTAGCCTCCTTTCGGGAGAGTTTGCGAGACGAAACAAAGAACAAAAACCAACCAACACCATCGAACATAAAGAACCAAAACAGAACATCGCTCAAACTGAAGACCCCTCAGAGATATCAAACAACTTAGATTGGAGGACGGTATTCCACAACAACCTGCTGCTTGATCCAAGCGAAACTGTCGAAGCCATAGACCAAAAGTCCATGACATCAAGCGGATACATGAATCATGTAGTAGGAGTGGTCGAAACCGAAAGTTGTAATCAGGAAATGGTGAATGATTCAAGAAAGTACAAGGCTCACTTCCCCAATGCTTCCTCTGTAGTGAGCAGCCTGAGCAGCTCAAGGGAAACGAGTCCTGATAAATCAAATGCTTCATCCTCGGTGTTATTTGCAAAAGCCCCATTTGGAAGCAATGGAAGTAATTGGCTTCCATCACCACCCCAAATGAGGCCTGCTCTTATTTCTTTGCCTGTTTGGAATGATGCATGAGACAGCTTCTTTCCATGTTTTCTTTTCAATGTTTAGAAACATGTAATGAATTCTAATCCAAATCCAATCCAATCCACCTTGTT 1892 42.92 MHRGKNTRNFYISRQLELVREMDMETSSEPQQHSHYQHQSQAISAVAVSNTMSNSFLASHHYNGDFLSPLSVMPLKSDGSLCIMESISTSQSEEILPDISPKLEDFLGGVTHGKEATALSLDSIYYNQNAETDSERQHSLNLFKQQEQQHILFHSQLYYSGTFHYPAEDPNKKSHIACSCSEIRQDMEQRINGCCFVGMNSQDLQPLRLSMSPGSQSSCVTAPSQISQPGPATMETKKRGLASQKQPVYRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHLNFPLKNYQLEIEEMKNMNRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGANAVTNFDTSRYDVERIITSSSLLSGEFARRNKEQKPTNTIEHKEPKQNIAQTEDPSEISNNLDWRTVFHNNLLLDPSETVEAIDQKSMTSSGYMNHVVGVVETESCNQEMVNDSRKYKAHFPNASSVVSSLSSSRETSPDKSNASSSVLFAKAPFGSNGSNWLPSPPQMRPALISLPVWNDA 597
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 81862096 81865046 - XM_039041434.1 Bhi09g03196 45813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03196 597 Gene3D AP2/ERF domain 261 330 IPR036955 GO:0003700|GO:0006355
Bhi09g03196 597 Gene3D AP2/ERF domain 364 424 IPR036955 GO:0003700|GO:0006355
Bhi09g03196 597 SMART rav1_2 262 334 IPR001471 GO:0003700|GO:0006355
Bhi09g03196 597 SMART rav1_2 364 428 IPR001471 GO:0003700|GO:0006355
Bhi09g03196 597 MobiDBLite consensus disorder prediction 218 232 - -
Bhi09g03196 597 MobiDBLite consensus disorder prediction 218 244 - -
Bhi09g03196 597 ProSiteProfiles AP2/ERF domain profile. 262 328 IPR001471 GO:0003700|GO:0006355
Bhi09g03196 597 SUPERFAMILY DNA-binding domain 363 423 IPR016177 GO:0003677
Bhi09g03196 597 MobiDBLite consensus disorder prediction 443 465 - -
Bhi09g03196 597 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 193 586 - -
Bhi09g03196 597 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 22 166 - -
Bhi09g03196 597 MobiDBLite consensus disorder prediction 443 470 - -
Bhi09g03196 597 Pfam AP2 domain 364 414 IPR001471 GO:0003700|GO:0006355
Bhi09g03196 597 Pfam AP2 domain 262 320 IPR001471 GO:0003700|GO:0006355
Bhi09g03196 597 ProSiteProfiles AP2/ERF domain profile. 364 422 IPR001471 GO:0003700|GO:0006355
Bhi09g03196 597 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 193 586 - -
Bhi09g03196 597 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 22 166 - -
Bhi09g03196 597 PRINTS Ethylene responsive element binding protein signature 263 274 IPR001471 GO:0003700|GO:0006355
Bhi09g03196 597 PRINTS Ethylene responsive element binding protein signature 404 424 IPR001471 GO:0003700|GO:0006355
Bhi09g03196 597 SUPERFAMILY DNA-binding domain 261 329 IPR016177 GO:0003677
Bhi09g03196 597 CDD AP2 363 424 IPR001471 GO:0003700|GO:0006355
Bhi09g03196 597 CDD AP2 261 328 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi04g00456 Bhi09g03196 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g03193 Bhi-Chr9:81862096 Bhi09g03196 Bhi-Chr9:81862096 0 dispersed
Bhi09g03194 Bhi-Chr9:81862096 Bhi09g03196 Bhi-Chr9:81862096 0 dispersed
Bhi09g03196 Bhi-Chr9:81862096 Bhi10g00331 Bhi-Chr10:7185763 1.79E-115 dispersed
Bhi09g03195 Bhi-Chr9:81862096 Bhi09g03196 Bhi-Chr9:81862096 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2017 PF00847 AP2 1.30E-13 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03196 K09285 - csv:101212143 972.615