Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03206 GGTAATTAGGGAAAGAAAAAAATGCAACAAAGAAAAAAGAGGGTTTCGATTTTCTTCCACCCAAACGATGGAATAGAAGAGACTCGGTAGAACCGGAGCTCGGTTTTTTTAAAATTTATTAAAATTTTAATTTTCCTCTTTCTCAGTGCCTCCCATTCTTTCGTGTCTTAGATCCTCCAAAATTTCTTCTGACATTTTTTATTTTTTGAGGGAGGAAAATGCACTGTTCTCAAGTATGAATGATTTACATTCATGGAATCGCTTTTGATTGTGTATTATTTTGAAGGGTTTTTGATGATTTGGCCCTTTTTGTGGAGGTCGAAGGGGAAGTGAGATTCATTTGTGGTTACTGATGATGATTGAGGCGATGGTGAAGAAGAAGAAGAAGGCCTTTCTTTTGACTAACGATAGGGTTCAGTTAAAGGAAGAAAAAGAAAAGATTTCCCCATTCCCCATTTTTTGCTGCTGCTTCTGATTGTCAATGACTGGAAGGATAGCTGTATGTTAAAAGATTGTGGAACGAAGAGAAAGGATTTGGGTTTTTTTTTTTTTTTTTTTTTTTTGATTTCTTCTTTTGAGGGTTTTGGAAAATGCCGATGTACCAGCCTTCCGGTCGGAGAAGAGAGGCCGATTCGGAGCTGGGTTTAGGTGGTGGTGGGCAAGTTCTTGATGTGGAAACCGCCGTGAAGGATGGTATTCTCGGCGGCGGCGGAGGCGGTGGGTTCATTTGCGAGGGTGGAATAACTGAGAAATTGGATCTGAAAGAGATAGTGGAGGAGCTTGAGAACATTGAGGTTCCTTCAGTGTTTATTTGCCCAATTTCATTAGAGCCAATGCGAGATCCTGTGACCCTTTGTACAGGACAGACCTACGAACGATCCAATATCCTGAAATGGTTCTCTCTTGGCCATATCACATGCCCCACCACAATGCAAGAGCTTTGGGATGATTCAATCACTCCGAATAACACTCTTCACCAACTCATTTACAGTTGGTTTTCCCAGAAGTATTTGGCTATGAAGAAGAGGTCTGAGGATGTGCAAGGGAGGGCTCTCGAGCTCTTAGACACATTGAAGAAGGTCAAGGGCCAAGCTAGAGTTCGAGCTTTGAAGGATCTTCGCCAAGTTGTAGGTTCAAATTCGGCGAAAAACACTGTGGAAGACAATGGTGGAGTTGCTTTGATTTCCTCTTTGTTGGGTCCTTTCACATCCCACGCGGTTGGCTCGGAAGCCATTGGGATTTTGGTGAACTTGGATCTAGATGCCGAGTCGAGGAGAAACCTTGTTCAACCTGCTAAGATTTCGTTAATGGTGGACATGTTGAACGAGGGATCCCCAGAGACCAAAATCAACTGCACCAGATTGATTGAAACTTTACTCGATGGGGATGATTGTGGAGCGGACACCGTCTCGAGTTTTAGTCTCGTGGTTGGATTGTTAAGATTAATCAAAGAAAAGAAACACCCAAATGGTGTTCTTGCTGGATTAAGATTGCTAAAAGCTCTGTGCTCCCAAGAACCAGTGAGGAATTCAGTAGTAAGCATTGGAGCAATCCCACAGTTGATCGAAATTCTCCCGAATTTCGACCCCGAATGCTTGGAACTAGCCCTTCATGTATTGGACTCACTCTCATCCCTCTCAGAGGGCAGGGTGGCCTTGAAAGATTGCCCCAACACCATTCCAAATTTGGTCAAATTGTTAATGAGAGTCTCAGAGAGCTGCACTCAGCTGGCTTTATCAATCCTATGGGCAGTTTGTAAACTTGCCCCTGAAGAATGTGCATCCCAAGCTGTGGAAGCAGGCTTAGCAGCCAAGCTTCTTCTGGTGATTCAGAGCGGTTGCAACCCCGTTCTGAAACAACGCTCTGCCGAGCTTCTAAAGCTCTGCAGCTTAAATTACACAGCAACCCTCTTCATATCCAAGTGTAAGCTTACAAGGACAATACAATAAGGAAGAAGAAAAAAAGAAAAAGATAAACCCAGCCAAATTGGAATACAGAAAACCACCATCTCTATAGAGCTCCATTTCCAGTTGAAGAAAGAAAAACAAAAAACAAAAGCTTATCATAAGGAGCAGTGGGCATTGGCATTTTTTCAAGAATAAGCCTACGCAAATGGCCACTGAAATCTGAAAGCACAGAGAACATCATGGCTTCTCAGTAATAGATTCTTATGTGGATAAGATAAGATAAGATTCTTGTTAGCCTGAGTTTTGAAGAGTGAATGAAGATCTCTTTTCCTGCATTTAGGCTTCTTCTTCTTCTTCCATCTGGGGATGAATCAATCAAGTGGGGGTGAGTTTTGGAGTCTCACCATTGTAAATTTTTGTAGAGCTTTTTGTTGACCTATCAAATCAAATCTTGTATGATGATGATGAAGAACAATTTATGATCAATATTATTATTATTTTTTCCTTGTTTCA 2420 41.82 MPMYQPSGRRREADSELGLGGGGQVLDVETAVKDGILGGGGGGGFICEGGITEKLDLKEIVEELENIEVPSVFICPISLEPMRDPVTLCTGQTYERSNILKWFSLGHITCPTTMQELWDDSITPNNTLHQLIYSWFSQKYLAMKKRSEDVQGRALELLDTLKKVKGQARVRALKDLRQVVGSNSAKNTVEDNGGVALISSLLGPFTSHAVGSEAIGILVNLDLDAESRRNLVQPAKISLMVDMLNEGSPETKINCTRLIETLLDGDDCGADTVSSFSLVVGLLRLIKEKKHPNGVLAGLRLLKALCSQEPVRNSVVSIGAIPQLIEILPNFDPECLELALHVLDSLSSLSEGRVALKDCPNTIPNLVKLLMRVSESCTQLALSILWAVCKLAPEECASQAVEAGLAAKLLLVIQSGCNPVLKQRSAELLKLCSLNYTATLFISKCKLTRTIQ 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 82258321 82260900 - XM_039043150.1 Bhi09g03206 45823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03206 452 SUPERFAMILY ARM repeat 163 433 IPR016024 -
Bhi09g03206 452 SUPERFAMILY RING/U-box 63 139 - -
Bhi09g03206 452 MobiDBLite consensus disorder prediction 1 21 - -
Bhi09g03206 452 CDD RING-Ubox_PUB 73 115 IPR045210 -
Bhi09g03206 452 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 142 IPR013083 -
Bhi09g03206 452 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 30 41 451 - -
Bhi09g03206 452 SMART Ubox_2 72 135 IPR003613 GO:0004842|GO:0016567
Bhi09g03206 452 ProSiteProfiles U-box domain profile. 68 142 IPR003613 GO:0004842|GO:0016567
Bhi09g03206 452 Gene3D - 143 438 IPR011989 -
Bhi09g03206 452 PANTHER WDSAM1 PROTEIN 41 451 IPR045185 GO:0061630
Bhi09g03206 452 Pfam U-box domain 69 139 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g03206 Bhi-Chr9:82258321 Bhi01g01962 Bhi-Chr1:43851638 4.49E-33 dispersed
Bhi09g03206 Bhi-Chr9:82258321 Bhi09g03207 Bhi-Chr9:82258321 0 tandem
Bhi03g01378 Bhi-Chr3:28503564 Bhi09g03206 Bhi-Chr9:82258321 5.66E-37 transposed
Bhi10g01691 Bhi-Chr10:42615779 Bhi09g03206 Bhi-Chr9:82258321 4.76E-36 transposed
Bhi10g02332 Bhi-Chr10:60735420 Bhi09g03206 Bhi-Chr9:82258321 5.23E-33 transposed
Bhi04g00447 Bhi-Chr4:11180965 Bhi09g03206 Bhi-Chr9:82258321 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03206 - - csv:101223113 820.846