Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03207 GTAATTAGGGAAAGAAAAAAATGCAACAAAGAAAAAAGAGGGTTTCGATTTTCTTCCACCCAAACGATGGAATAGAAGAGACTCGGTAGAACCGGAGCTCGGTTTTTTTAAAATTTATTAAAATTTTAATTTTCCTCTTTCTCAGTGCCTCCCATTCTTTCGTGTCTTAGATCCTCCAAAATTTCTTCTGACATTTTTTATTTTTTGAGGGAGGAAAATGCACTGTTCTCAAGTATGAATGATTTACATTCATGGAATCGCTTTTGATTGTGTATTATTTTGAAGGGTTTTTGATGATTTGGCCCTTTTTGTGGAGGTCGAAGGGGAAGTGAGATTCATTTGTGGTTACTGATGATGATTGAGGCGATGGTGAAGAAGAAGAAGAAGGCCTTTCTTTTGACTAACGATAGGGTTCAGTTAAAGGAAGAAAAAGAAAAGATTTCCCCATTCCCCATTTTTTGCTGCTGCTTCTGATTGTCAATGACTGGAAGGATAGCTGTATGTTAAAAGATTGTGGAACGAAGAGAAACCTTCCGGTCGGAGAAGAGAGGCCGATTCGGAGCTGGGTTTAGGTGGTGGTGGGCAAGTTCTTGATGTGGAAACCGCCGTGAAGGATGGTATTCTCGGCGGCGGCGGAGGCGGTGGGTTCATTTGCGAGGGTGGAATAACTGAGAAATTGGATCTGAAAGAGATAGTGGAGGAGCTTGAGAACATTGAGGTTCCTTCAGTGTTTATTTGCCCAATTTCATTAGAGCCAATGCGAGATCCTGTGACCCTTTGTACAGGACAGACCTACGAACGATCCAATATCCTGAAATGGTTCTCTCTTGGCCATATCACATGCCCCACCACAATGCAAGAGCTTTGGGATGATTCAATCACTCCGAATAACACTCTTCACCAACTCATTTACAGTTGGTTTTCCCAGAAGTATTTGGCTATGAAGAAGAGGTCTGAGGATGTGCAAGGGAGGGCTCTCGAGCTCTTAGACACATTGAAGAAGGTCAAGGGCCAAGCTAGAGTTCGAGCTTTGAAGGATCTTCGCCAAGTTGTAGGTTCAAATTCGGCGAAAAACACTGTGGAAGACAATGGTGGAGTTGCTTTGATTTCCTCTTTGTTGGGTCCTTTCACATCCCACGCGGTTGGCTCGGAAGCCATTGGGATTTTGGTGAACTTGGATCTAGATGCCGAGTCGAGGAGAAACCTTGTTCAACCTGCTAAGATTTCGTTAATGGTGGACATGTTGAACGAGGGATCCCCAGAGACCAAAATCAACTGCACCAGATTGATTGAAACTTTACTCGATGGGGATGATTGTGGAGCGGACACCGTCTCGAGTTTTAGTCTCGTGGTTGGATTGTTAAGATTAATCAAAGAAAAGAAACACCCAAATGGTGTTCTTGCTGGATTAAGATTGCTAAAAGCTCTGTGCTCCCAAGAACCAGTGAGGAATTCAGTAGTAAGCATTGGAGCAATCCCACAGTTGATCGAAATTCTCCCGAATTTCGACCCCGAATGCTTGGAACTAGCCCTTCATGTATTGGACTCACTCTCATCCCTCTCAGAGGGCAGGGTGGCCTTGAAAGATTGCCCCAACACCATTCCAAATTTGGTCAAATTGTTAATGAGAGTCTCAGAGAGCTGCACTCAGCTGGCTTTATCAATCCTATGGGCAGTTTGTAAACTTGCCCCTGAAGAATGTGCATCCCAAGCTGTGGAAGCAGGCTTAGCAGCCAAGCTTCTTCTGGTGATTCAGAGCGGTTGCAACCCCGTTCTGAAACAACGCTCTGCCGAGCTTCTAAAGCTCTGCAGCTTAAATTACACAGCAACCCTCTTCATATCCAAGTGTAAGCTTACAAGGACAATACAATAAGGAAGAAGAAAAAAAGAAAAAGATAAACCCAGCCAAATTGGAATACAGAAAACCACCATCTCTATAGAGCTCCATTTCCAGTTGAAGAAAGAAAAACAAAAAACAAAAGCTTATCATAAGGAGCAGTGGGCATTGGCATTTTTTCAAGAATAAGCCTACGCAAATGGCCACTGAAATCTGAAAGCACAGAGAACATCATGGCTTCTCAGTAATAGATTCTTATGTGGATAAGATAAGATAAGATTCTTGTTAGCCTGAGTTTTGAAGAGTGAATGAAGATCTCTTTTCCTGCATTTAGGCTTCTTCTTCTTCTTCCATCTGGGGATGAATCAATCAAGTGGGGGTGAGTTTTGGAGTCTCACCATTGTAAATTTTTGTAGAGCTTTTTGTTGACCTATCAAATCAAATCTTGTATGATGATGATGAAGAACAATTTATGATCAATATTATTATTATTTTTTCCTTGTTTCA 2344 42.19 MRDPVTLCTGQTYERSNILKWFSLGHITCPTTMQELWDDSITPNNTLHQLIYSWFSQKYLAMKKRSEDVQGRALELLDTLKKVKGQARVRALKDLRQVVGSNSAKNTVEDNGGVALISSLLGPFTSHAVGSEAIGILVNLDLDAESRRNLVQPAKISLMVDMLNEGSPETKINCTRLIETLLDGDDCGADTVSSFSLVVGLLRLIKEKKHPNGVLAGLRLLKALCSQEPVRNSVVSIGAIPQLIEILPNFDPECLELALHVLDSLSSLSEGRVALKDCPNTIPNLVKLLMRVSESCTQLALSILWAVCKLAPEECASQAVEAGLAAKLLLVIQSGCNPVLKQRSAELLKLCSLNYTATLFISKCKLTRTIQ 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 82258321 82260899 - XM_039043151.1 Bhi09g03207 45824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03207 371 ProSiteProfiles U-box domain profile. 1 61 IPR003613 GO:0004842|GO:0016567
Bhi09g03207 371 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 30 1 370 - -
Bhi09g03207 371 PANTHER WDSAM1 PROTEIN 1 370 IPR045185 GO:0061630
Bhi09g03207 371 SUPERFAMILY RING/U-box 1 58 - -
Bhi09g03207 371 CDD RING-Ubox_PUB 1 34 IPR045210 -
Bhi09g03207 371 SUPERFAMILY ARM repeat 81 352 IPR016024 -
Bhi09g03207 371 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 61 IPR013083 -
Bhi09g03207 371 SMART Ubox_2 1 54 IPR003613 GO:0004842|GO:0016567
Bhi09g03207 371 Gene3D - 62 357 IPR011989 -
Bhi09g03207 371 Pfam U-box domain 1 58 IPR003613 GO:0004842|GO:0016567
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi04g00447 Bhi09g03207 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00447 Bhi-Chr4:11180965 Bhi09g03207 Bhi-Chr9:82258321 0 dispersed
Bhi09g03207 Bhi-Chr9:82258321 Bhi01g01677 Bhi-Chr1:35187899 1.61E-37 dispersed
Bhi09g03206 Bhi-Chr9:82258321 Bhi09g03207 Bhi-Chr9:82258321 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03207 - - csv:101223113 699.123