Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03235 ATGGATTCTTTTGGTGGCTTTAGTGGGGAAGGGGAATGGGATCTGTGCAGCTCAATTTTATCATTGGAAGACTTTGATTTTACGCCAATTTATAATGTTATTCCTCAGCCCGATGCAGCTTGGTTTTATTCTAATTTGCCTTCTTGTCATGTTGGTAATGATATCGATCAATTTCCTTGTAATATTATTGCTGCTGATCATCATCATCTTCATCATTATGATCAAGAGAATAAGATCATGGACTCCATTTTCTCGGCCTCTACTACTGAGATCTTGATGCAAGAAATCACTGGCTTTTCTAGTGAAGATAAATTTGTTAACATGGATGTTCAAACCCGCCTAGGGGATGATGATGATGATGATAATAATGCTACAAATTCTGCCAATGCATTATTCCAACACAAAAGGAAATCCATTGTCGTCGCTGATGATCACGATCACAACAAGCTCATCAACCCCAATAAAAAAAGTCGTACTTCGAACAATGTGCAGAAGAGTAGGAAAAGTAGAGAGTTGAGTGATAATACTAAGAGCAATGGCATAAAAGTGAGCCCTACACGGCGGCGCAAATGTGAAGAAAAAGAGGAAAACGGAGCTGGGTCGTGTGATATGAACAGTTGCAGCAGCGATGACTCATCAGAAGATGACAATGCTTCACAACATACAAATGCCGAACCACCAAAACCCAAAACAAGAGCCATCAGAGGCTCAGCTACTGATCCACAGAGCCTTTACGCAAGGAAGAGAAGAGAGAGAATCAATGAGCGGCTTAGAATTCTGCAGAAACTTGTCCCTAATGGAACAAAGGTTGACATTAGCACAATGCTTGAGGAAGCAGTTCATTACGTAAAATTTCTGCAGCTTCAAATAAAGCTTTTGAGCTCTGATGAGTTGTGGATGTATGCTCCAATTGCTTACAATGGGATGGATATTGGTCTGCAGCAGAAGCTTTCTTCAATTTTATGACCAAATTAATCAAAATTAAATTAAAATGACCCTTTTGTAATTTTTCATATCCGGCTTTCCACCTTAGTAAATGCAAAATTCGCATACTAAAAATGGAACGAGATTAAACAAATT 1080 38.89 MDSFGGFSGEGEWDLCSSILSLEDFDFTPIYNVIPQPDAAWFYSNLPSCHVGNDIDQFPCNIIAADHHHLHHYDQENKIMDSIFSASTTEILMQEITGFSSEDKFVNMDVQTRLGDDDDDDNNATNSANALFQHKRKSIVVADDHDHNKLINPNKKSRTSNNVQKSRKSRELSDNTKSNGIKVSPTRRRKCEEKEENGAGSCDMNSCSSDDSSEDDNASQHTNAEPPKPKTRAIRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDELWMYAPIAYNGMDIGLQQKLSSIL 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 83139325 83141396 - XM_039044150.1 Bhi09g03235 45852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03235 321 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 71 319 - -
Bhi09g03235 321 SMART finulus 243 292 IPR011598 GO:0046983
Bhi09g03235 321 Pfam Helix-loop-helix DNA-binding domain 247 287 IPR011598 GO:0046983
Bhi09g03235 321 MobiDBLite consensus disorder prediction 142 241 - -
Bhi09g03235 321 PANTHER TRANSCRIPTION FACTOR BHLH54 71 319 - -
Bhi09g03235 321 Gene3D - 240 295 IPR036638 GO:0046983
Bhi09g03235 321 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 237 286 IPR011598 GO:0046983
Bhi09g03235 321 MobiDBLite consensus disorder prediction 185 199 - -
Bhi09g03235 321 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 240 303 IPR036638 GO:0046983
Bhi09g03235 321 MobiDBLite consensus disorder prediction 201 226 - -
Bhi09g03235 321 CDD bHLH_AtIND_like 238 300 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi04g00411 Bhi09g03235 CCT
Bhi04g00411 Bhi09g03235 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g03235 Bhi-Chr9:83139325 Bhi11g01138 Bhi-Chr11:33718223 4.38E-52 dispersed
Bhi09g03309 Bhi-Chr9:84666961 Bhi09g03235 Bhi-Chr9:83139325 6.02E-21 dispersed
Bhi05g01280 Bhi-Chr5:45903363 Bhi09g03235 Bhi-Chr9:83139325 1.53E-12 transposed
Bhi04g00411 Bhi-Chr4:10618267 Bhi09g03235 Bhi-Chr9:83139325 2.22E-57 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2020 PF00010 HLH 9.40E-09 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03235 - - csv:101209196 355.14