Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03250 TAAGAAAAGATTGCAATGGCTTTATTTCATTCAGTCTCAGTAATTTGGGGGAAGGCGGAGAGGGCATATTACCGAGTCCTCTCTTCCGTCATTTCTGTCCCGTCTGCACCGTCGCGTACGGTTCACCGGCACACCATGTCGCCGCCCTGGGCCGATTCATATTCTGCCATCGTCTTCTATTGTTTAGTTGGTTTTAATTTGCTAGGCAGGATTCTTTCCTCTTCTGTGCACGCGAGAGATTTCGATTATCAGCAACAGCCTGTGATTCTTCCTCTCTATATCTCGCCCATGAATTCTACTCATCAGCGCGTTTTGGACCGTGATCACCGTCTCCGGCACCTGCAGAACTTGGGTAAGCCCCACTCGTCAAATGCTCGAATGAGGCTCCACGATGACCTCCTTACCAACGGGTATTACACGACACGTCTTTGGATTGGGACTCCTCCACAAGAATTTGCTCTTATCGTCGATACCGGAAGTACTGTGACGTATGTTCCATGCTCTAACTGCGTAGAGTGCGGGAATCATCAGGATCCAAGGTTCCAACCAGAGCTGTCTAGCACATATCAACCTGTTAAGTGCAATGTCGATTGTAACTGTGATGACAATGGAGTCCAGTGTACGTACGAGAGACGGTATGCAGAGATGAGTACTAGCAGTGGTGTGCTTGCTGAGGACATCATGTCATTTGGAAAAGAAAGTGAACTTGTACCCCAGCGTGCTGTCTTTGGGTGTGAAACTATGGAAACTGGTGATCTTTATACCCAACGTGCTGATGGGATTATGGGTTTGGGCCGTGGTACACTCAGTGTGATGGACCAACTTGTTGAGAAACGAGTTATCAGCAATTCATTTTCGTTATGTTATGGTGGGATGGATGTTGGTGGGGGTGCAATGGTTCTTGGCGGGATCTCTTCACCCCCTGGTATGGTATTCACCCACTCAGACCCATCTCGAAGCCCATATTATAATATAGAGCTGAAGGAAATACATGTTGCTGGGAAGCCGTTGAAGTTGAATCCTAGCACTTTTGATGGGAAGTATGGTGCTATCTTGGATAGTGGAACTACATATGCTTATTTTCCAGAAAAAGCCTACTATGCATTCAAGGATGCTATAATGAAGAAGATTAGTTTCCTGAAACAAATTGGTGGTCCTGACCCGAATTTTAAAGATATTTGTTTCTCTGGTGCTGGGAGGGATGTCACTGAACTTTCAAAAGTTTTTCCAGAGGTTGATATGGTTTTTGCCAATGGACAGAAAATTTCACTTTCTCCAGAAAACTACTTGTTCCGGCATACTAAGGTTAGTGGTGCATATTGTCTGGGAGTCTTTAAAAATGGGAATGATCAGACAACACTTTTGGGAGGAATTATCGTTCGTAATACTCTTGTCACTTATGATCGAGAGAACACCACAATTGGGTTTTGGAAGACTAACTGTTCTGAACTCTGGAAGAATCTGCATTATCTTTCTCCTGCTCCTCCTCCAGCTCCTCCTCCAGCTCCTTTACCTTCCTATGGTCAGAATACAAGTAAAGAAGTTCCTCCACCTGGTTCTCCAAGTGTGCCATTTCTTTCCGGTGAATTTCAGGTTGGAGTCATAACATTTAATATGATGCTTCATGTAAACAAATCCTCCGTGAAACTTAACATCACTGAGCTTGCAGAATTTATTGCCAATGAGCTTGAAGTTAATGTCTCACAGGTTCATGTGCTGAACTTTACATTAGGGGAAACTGAATTCTTCATTAGATGGGCCATCTTCCCTGCTGACCCTGCTGGTTATATATCTAATACCACGGCAATGGACATAATTTCTCGCTTAAAGGAACATGACTTGCAACTTCCTGAAAAATTCGGAAGTTATCAGCTGGTTGAGTTGAATGTTGAACCTCCGTTAAAGAAGACATGGATGGAGCAGCACTTCTGGTCTATGATGACTATTGGAGTAGCAGTTACCTTAGTAGTTGGATTGGCAGCCGTAAGCACGTGGTTGATTTGGAGATATAGACGGAGGGAACTGAGTTCCTATGAGCCTGTTGGTGTAGTAGGACCCGAACAAGAGCTTCAGCCATTATAGATCTTTTTTTTTTTTTTTTTTTCCTTTTTTGGTTGAAGTTATGATTCTGTTTATCAGATGTATAGTTCAGAATTAAAGAAAAGATATGATTTGGTTAGGAAGGGAGAGTGGAGTTTGAAATAGCTTTCTAAATCTGAGTGTATAATGGTAGCGTCACACCGTCACTCATACTATGAAAGGTTTAGGACTGTAGGGATGAAACCTTGTACACTGATAAAGAGTTGTAGTAAAAACCACAGGAAGAAGGAAAAGAAACCACACCAAACAAAAACATATGTTGAAAAACATGAATTTTTATTGGAATGAGTTCTGTATTTTAGAAATTGAACCAGAGACAAAATTGTACA 2429 42.57 MALFHSVSVIWGKAERAYYRVLSSVISVPSAPSRTVHRHTMSPPWADSYSAIVFYCLVGFNLLGRILSSSVHARDFDYQQQPVILPLYISPMNSTHQRVLDRDHRLRHLQNLGKPHSSNARMRLHDDLLTNGYYTTRLWIGTPPQEFALIVDTGSTVTYVPCSNCVECGNHQDPRFQPELSSTYQPVKCNVDCNCDDNGVQCTYERRYAEMSTSSGVLAEDIMSFGKESELVPQRAVFGCETMETGDLYTQRADGIMGLGRGTLSVMDQLVEKRVISNSFSLCYGGMDVGGGAMVLGGISSPPGMVFTHSDPSRSPYYNIELKEIHVAGKPLKLNPSTFDGKYGAILDSGTTYAYFPEKAYYAFKDAIMKKISFLKQIGGPDPNFKDICFSGAGRDVTELSKVFPEVDMVFANGQKISLSPENYLFRHTKVSGAYCLGVFKNGNDQTTLLGGIIVRNTLVTYDRENTTIGFWKTNCSELWKNLHYLSPAPPPAPPPAPLPSYGQNTSKEVPPPGSPSVPFLSGEFQVGVITFNMMLHVNKSSVKLNITELAEFIANELEVNVSQVHVLNFTLGETEFFIRWAIFPADPAGYISNTTAMDIISRLKEHDLQLPEKFGSYQLVELNVEPPLKKTWMEQHFWSMMTIGVAVTLVVGLAAVSTWLIWRYRRRELSSYEPVGVVGPEQELQPL 688
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 83375495 83381818 - XM_039042774.1 Bhi09g03250 45867

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03250 688 ProSiteProfiles Peptidase family A1 domain profile. 134 472 IPR033121 -
Bhi09g03250 688 Pfam Xylanase inhibitor N-terminal 134 298 IPR032861 -
Bhi09g03250 688 CDD pepsin_A_like_plant 133 476 IPR034161 -
Bhi09g03250 688 PANTHER ASPARTYL PROTEASES 75 522 IPR001461 GO:0004190|GO:0006508
Bhi09g03250 688 Gene3D Acid Proteases 115 297 IPR021109 -
Bhi09g03250 688 MobiDBLite consensus disorder prediction 494 515 - -
Bhi09g03250 688 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 75 522 - -
Bhi09g03250 688 SUPERFAMILY Acid proteases 130 481 IPR021109 -
Bhi09g03250 688 Pfam Xylanase inhibitor C-terminal 318 471 IPR032799 -
Bhi09g03250 688 Gene3D Acid Proteases 305 481 IPR021109 -
Bhi09g03250 688 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 149 160 IPR001969 GO:0004190|GO:0006508
Bhi09g03250 688 PRINTS Pepsin (A1) aspartic protease family signature 140 160 IPR001461 GO:0004190|GO:0006508
Bhi09g03250 688 PRINTS Pepsin (A1) aspartic protease family signature 345 356 IPR001461 GO:0004190|GO:0006508
Bhi09g03250 688 PRINTS Pepsin (A1) aspartic protease family signature 448 463 IPR001461 GO:0004190|GO:0006508
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03250 - - - cmos:111442809 1234.55
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01814 Bhi-Chr8:53052848 Bhi09g03250 Bhi-Chr9:83375495 7.00E-10 dispersed
Bhi09g03250 Bhi-Chr9:83375495 Bhi10g02113 Bhi-Chr10:53230228 0 dispersed
Bhi09g03250 Bhi-Chr9:83375495 Bhi10g00112 Bhi-Chr10:2483106 1.43E-48 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g682 . Blo12g00980 . Bda03g00191 . Bpe04g00164 . . . . . Cma09g00272 . . . . . . . . . . . . . . . . . . . . . Cone17ag0871 Cone20ag0219 . Csa04g02461 . . . . . . . . . . . . Cmo09g00268 . . . Car09g00227 . . Bhi09g03250 . . . Hepe01g1811 Mch11g0344 . Cla05g02090 . . . . . . . . Chy07g00175 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002183 1 4 2 1 2 2 3 2 2 2 2 2 3 2 2 3 2 3 3 2 2 1 3 2 2 2 2 1 2 2 64