Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03254 TTATATTGTATGTTTTTTAGTTGCATTAGTTCTATATATTATGCAAATGATCTACATATTTCTAAAGATTTTTATTTTACAAAATAACAATTTTGCATGTTGAGTTATTGGATGATTATTAATTAAAGAATCACTTTAATGGGTTCATGTGAGGCAGCGGTGGTAGCAATGAGCATGTCAAAAAGGTACACATGAAATCCACTTTCGGCGACGAGATTGCTACCTCTATTTGCTCTGCGATTTTGAGAGGCTTTCATATAGTCACTGTTGAACTTCAACATGACGTCAGGATATTCAACATGAAATTCTCAGCGACAAACCTCAGTTTCAGCATCTAAAGAAGCAGCTTAGGTAACGTTCAATCTCAAGAAAAATTTGAGAATTATTTGGATTGTAAAGTTTGTTATGGATGGTTCAATTTTAGGGCATTTGAAGGCGATTTGTCGGAGATCATCACGCTCTGCGAGGCGGAAAATGTGGAGAAAATCCTTGAGGAAAGTGCTTGTGCGCTAGGTTAGTGGTGCCGACTGTTTTTTGATTGATTGATCAATCGGTGGATTCTACTGCTGTTTGTTCCTTTGCGGCTGAATTTAACAGTTCGAATGATGAATTTTGCAGCAATTTTTCTTGCTCTAGCAGTCGGGCAATTCCTCTGCAACGTCCGCGGAACTTTTACGCGTACGTAACCCTAACTTTCAACTTAATCCACAGTTTCCGTTTTCAGTTCTTTCGATTTTCAATCGGCGGAATGCAGTGAAAGAATCGGCGTGGTTCTGTGATTCAGCAGGTTAATCAGCCACCGGTGAGCTCTGAACATTTAAGAGCGACGTTCTCCCCCAATTTGTCCCCACTGGCAATCCCCTCCCTGATTGAGGCCGCTCCGACTTTTTTCGACGAAAACCAACTTCCTCTGCTTTTTCGGGCAAGCTTTGACCATTTAGGAGCAACGTTTCTCCCCAATTCGTCTCCACAAGCAACTCGTTAGCAGATTGAGGCCATCCTGAGTTCCTTGAACGAAAGCCGTGTCATCGGGTACGTGATTTCATCTTGGAATCGATAATGGATCGTCTCTGTTAACTTGATCCTTTCGTCCTTCCCTGACCGACCTCCTTCTCGTTGAGAGATTAGATCGGCTCACTCGCGTCGTGAGGATGGCACCACATCGTCGTCTTCCAATCTTCTTATTTCCGAAGAAAATACGATCACTGAAAATTTCATCAACATTTCACAGCAGAGTGCCTTCTTTCCCACCAATCCCTAGAAATCTCGTCGATCGTTCCCGACGGAGATTACGGCGAACCCTCGGAGTTGCCGGATCCGAGATCGACTGAAACTATGGCGGATAAGGAGAATATATTTCGATTCACTAGGGGCTCTAAGAAGAGGGCCGCCGACGCCGCTACCCCCGACGACCGCTCTGCCAACAAGAGGAGAGTCGTTCTTGGAGAGCTTCCTATTTTACAGAATGCTTCTTCTTCCTCCGATCGTAAGTCCAAGTCTAGAGCCTCCAGGCACCGACGGAGAGTAAAATCAAAGGATACTGCCGGGACAAGTGCTGCTGCTGAAATCAATACACTCCCGGAAGGTGACGTCAAGTTATCAGATGAGGCCAATTCTGAAGACCCGCAAATGTGCAGGGTTTACGCCTCTGATATTTATGAATATCTTCGAGCTATGGAGACTGATCCAAGAAGAAGACCCTTACCGGATTACATCGGGAGGGTACAAAAGGATATTAGTGCCAATATGAGGGGGATTCTGGTGGATTGGTTGGTTGAAGTTGCAGAAGAATACAAACTAGTTTCAGATACTCTTTACCTCTCTATTTCATATGTAGACAGATACTTATCTCTAAATGCAATCAGCAGGCAAAAACTTCAGTTGGTGGGCGTTTCTGCCATGCTCATTGCCTCAAAGTATGAAGAAATCAGTCCTCCACATGTTGAAGAGTTTGTTTATATCACAGACAATACCTACAATAGAGAAGAGGTGGTTGAGATGGAGGCTGAAATATTGAAGTCACTGGAATTTGAACTTGGAAATCCCACAATAAAGACATTTTTAAGGAGATTCACATTGATTGCTCAAGAGACTTATGAGTTTAATACTTTGCAATTTGAATTCTTGGGCTACTATCTTGCTGAGTTAAGCCTACTAGACTACAACTGTGTCAAGTTCTTACCGTCTCTCATTGCTGCATCTGTTATATTTCTAGCACGATTTATGATCCAATCTAAGAAGCATCCTTGGACCTCCAGGTTGGAGCATTTTACTGGATATAAGCCCGCTGATATGAAGGATTGCGTTCTACTTGTACATGATTTATACCTTAGTAGAAGAGGAGGCGCTTTGGCAGCTATAAGGGAGAAATACAAACAACATAAGTTCAAATTTGTGTCTGTCATGCCTTCACCTCCAGAAATTCCTATTCCATATTTTGAAGATGTTAGAATATGAATGTACAAGATGACAATAATAGTTAGGAACTTACGATATGGGAGTGAATAGAAATTTATATTAGATAGGAATCTGAATTCCAGAGGCATGGTTCAGTTTCAATCTGCACAAGCTCTATAAGGCATTAGCTGATGGGCGAGTGTCCACTTGGAATGGAACATTTTTGTGCACTGGAAGGCGAGCCAAAGCTTGAAGGCCAAGCTGGCATATTTTCCCACAACATTTATTGCATTTTCTTCCCTTGTAAAGATTTCTTTTGAAAAACAGTAACCCCAATGTGGCTCACTTCTTAGATTTTAGGGTGTGTTTAGTACTGTACAAAATTCAGCAATGCACATCATGCATTGGGCCGGAAGCCCAGTTGAAAGCATAGAGTTCTCATATATATATATATATTTTTTCTTTTT 2864 41.86 MADKENIFRFTRGSKKRAADAATPDDRSANKRRVVLGELPILQNASSSSDRKSKSRASRHRRRVKSKDTAGTSAAAEINTLPEGDVKLSDEANSEDPQMCRVYASDIYEYLRAMETDPRRRPLPDYIGRVQKDISANMRGILVDWLVEVAEEYKLVSDTLYLSISYVDRYLSLNAISRQKLQLVGVSAMLIASKYEEISPPHVEEFVYITDNTYNREEVVEMEAEILKSLEFELGNPTIKTFLRRFTLIAQETYEFNTLQFEFLGYYLAELSLLDYNCVKFLPSLIAASVIFLARFMIQSKKHPWTSRLEHFTGYKPADMKDCVLLVHDLYLSRRGGALAAIREKYKQHKFKFVSVMPSPPEIPIPYFEDVRI 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 83471183 83476686 + XM_039043203.1 Bhi09g03254 45871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03254 373 PANTHER CYCLIN-A3-1-RELATED 24 371 - -
Bhi09g03254 373 SUPERFAMILY Cyclin-like 237 362 IPR036915 -
Bhi09g03254 373 Pfam Cyclin, N-terminal domain 106 234 IPR006671 -
Bhi09g03254 373 Gene3D - 120 235 - -
Bhi09g03254 373 PANTHER CYCLINS 24 371 IPR039361 -
Bhi09g03254 373 MobiDBLite consensus disorder prediction 1 33 - -
Bhi09g03254 373 MobiDBLite consensus disorder prediction 1 92 - -
Bhi09g03254 373 Gene3D - 106 356 - -
Bhi09g03254 373 SMART cyclin_7 241 329 IPR013763 -
Bhi09g03254 373 SMART cyclin_7 144 228 IPR013763 -
Bhi09g03254 373 SUPERFAMILY Cyclin-like 95 234 IPR036915 -
Bhi09g03254 373 SMART Cyclin_C_2 237 360 IPR004367 -
Bhi09g03254 373 PIRSF Cyclin_A_B_D_E 4 364 IPR039361 -
Bhi09g03254 373 ProSitePatterns Cyclins signature. 139 170 IPR006671 -
Bhi09g03254 373 CDD CYCLIN 138 227 IPR013763 -
Bhi09g03254 373 Pfam Cyclin, C-terminal domain 237 360 IPR004367 -
Bhi09g03254 373 CDD CYCLIN 237 328 IPR013763 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g03254 Bhi-Chr9:83471183 Bhi09g03256 Bhi-Chr9:83471184 0 dispersed
Bhi09g03254 Bhi-Chr9:83471183 Bhi09g03255 Bhi-Chr9:83471183 0 tandem
Bhi04g01879 Bhi-Chr4:47295376 Bhi09g03254 Bhi-Chr9:83471183 6.20E-27 transposed
Bhi04g00390 Bhi-Chr4:10133246 Bhi09g03254 Bhi-Chr9:83471183 4.32E-170 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03254 K06627 - csv:101207493 687.952