Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03300 TCTTCTCACTTGTTATATATATAATCTCAAACCCAAACCCAAACCCAAACCCAAACCTTATGTATTTAAAGTACACCCATACAGCGTCCCTATCTTTTTCTGGTTCAAACGGCTGGTCCTCCTTTTTGTTTTTATATACCGAATTCACAAGAAAATCAGAACCCGAGAACTAATACCACCCCCAAGTACAAGTAGTTACCCGCTTTTCATATTCAGCGTTTTCCTCATGGCCCTTCCCTAGTTACCTCTCAACTTGAATTTTTTACCTCAACCTTCTTATATATTACATACACCCAAAAGGGTGTGTGTTTGGGTTGGATTTTATTTTATTCTTTTCGCTCTAAGATGGAAGGAGAAGTTTGCTCCGCTGTAAATTCATCACCGAAGAGGAAGCAAAGACATAGTCAGAATCATCTCCAACAAGAAAAGCCTTACAGAGGAATAAGGATGAGGAAGTGGGGAAAGTGGGTTGCAGAAATCAGAGAACCCAACAAACGCTCCAGGATTTGGCTTGGTTCATACACAACCCCCGTCGCCGCCGCTAGAGCTTATGACACCGCCGTCTTCTATCTCCGTGGCCCTACCGCCCGCCTTAACTTCCCCGAGTTGATGTTCGAAGCAGACCAGCTACACGACATGTCGGCCGCCTCCATACGCAAACGAGCCACCGAAGTCGGCGCTAGGGTTGACGCCATCCAGACCTCCCTCAACGCCTCTAATTCCGGTACTCAAATTTCCGACAAGCCCGATTTAAACGAGTACCCCAACCCTGAAACCTCAGACGACGATTGATTTCTCTACCGTAAAACCGAAATTATGAAAAAGAGAAACGGAATAAAAAAATGATTCCGTTTTGCTCGGTTGTAGTTGTGCGATTGTAACCGCCCCCCTACACGGCTTTATACAAATACTTGATCATCTCGCCTAATTTTGGATGTTCCTTTTTATTCTTGGTATTTGTGGTTTATTTTAATTGGTAGGAATAGCAATTTTTTTGTTAGGAGGGGTGGCGCCGCCGTGTGGACGAGTGGACGCCCACCGGAGAAATTTGGGATAAGGGATGAAGATCTCAATTAAAAAAAAAAAAAAAATTAAAAATAAAGTTTGGAGCAAGGGGGGACAACAACTGGTGCACATGACATGCTTGTGGAGTCCACAAGAAGGCACAATGAAAAGAGAAGCCCAATATTATGTGAGAGCGAGAGAAAGCGATGTTATATTAGTGGCCTTCATATTAGGTTCTAAATTGTGAAGCTTTTGCCGGA 1265 43.64 MEGEVCSAVNSSPKRKQRHSQNHLQQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPTARLNFPELMFEADQLHDMSAASIRKRATEVGARVDAIQTSLNASNSGTQISDKPDLNEYPNPETSDDD 148
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 84293432 84294696 + XM_039041154.1 Bhi09g03300 45917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03300 148 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Bhi09g03300 148 PRINTS Ethylene responsive element binding protein signature 68 88 IPR001471 GO:0003700|GO:0006355
Bhi09g03300 148 Pfam AP2 domain 30 78 IPR001471 GO:0003700|GO:0006355
Bhi09g03300 148 MobiDBLite consensus disorder prediction 120 148 - -
Bhi09g03300 148 Gene3D AP2/ERF domain 29 88 IPR036955 GO:0003700|GO:0006355
Bhi09g03300 148 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Bhi09g03300 148 CDD AP2 30 88 IPR001471 GO:0003700|GO:0006355
Bhi09g03300 148 MobiDBLite consensus disorder prediction 120 135 - -
Bhi09g03300 148 SUPERFAMILY DNA-binding domain 29 87 IPR016177 GO:0003677
Bhi09g03300 148 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Bhi09g03300 148 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 11 146 - -
Bhi09g03300 148 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 11 146 - -
Bhi09g03300 148 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g02597 Bhi-Chr4:69666324 Bhi09g03300 Bhi-Chr9:84293432 1.11E-24 dispersed
Bhi09g03300 Bhi-Chr9:84293432 Bhi10g01799 Bhi-Chr10:45162547 9.20E-47 dispersed
Bhi09g03062 Bhi-Chr9:79176680 Bhi09g03300 Bhi-Chr9:84293432 1.02E-24 transposed
Bhi03g00951 Bhi-Chr3:17911018 Bhi09g03300 Bhi-Chr9:84293432 5.21E-53 wgd
Bhi04g00376 Bhi-Chr4:9233057 Bhi09g03300 Bhi-Chr9:84293432 7.94E-65 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2027 PF00847 AP2 2.10E-11 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03300 K09286 - csv:101219005 285.804