Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03309 ATGATAGCGTGTTCTTTGTATATTGTTAGTTTTTCTTCCTTCTCTCTCTGTTTCGCTCTCCCCAATTTTCTGAAACTTGGTCACTTGCAAAAATATGACACAGGATCTGATCGGATCGGATCGGTTCAGAGATTTCAATCCTATGGAAAATGATGATCTAAAATCGGAAGATCAGATGGAGATTATGATGATGATGCAACAAATGGAAAAAATCCCTGAATTTTACAATGATTTCTCACCGCCATCCTCTGATTTCAGCTCAAGCACCACCGATCACCCACATTGCCACCTGGACTCCTCCTCCTCACCGCCTCCATTATTCATCAACAACCCACCTTATAATTTCCCCCAACAATCTACTGTTCCATTCCCGGCCACCACGTCACGGTGGCGAAACTCCGGTGGTGAAACGGAGAGTTTACGGAAACAGAGGTCAGTAGCGGCGATGAGAGAGATGATATTCCGAATAGCAGTGATGCAACCAATTCACATAGACCCAGAAGCGGTGAAGCCACCAAAAAGAAGGAACGTCAAGATTTCAACTGACCCACAGAGCGTAGCGGCTCGGCATAGGAGAGAGAGAATTAGCGAAAGAATTAGAATACTTCAAAGATTAGTCCCTGGAGGTACTAAAATGGACACTGCTTCCATGTTGGATGAAGCTATTCATTACGTTAAATTCTTAAAGACCCAAGTTCAGTCCCTTGAAAGAGCCGCCGCCGCCGGTGCCGGTGCCGGGAACCGCCCAATTACTGGTGGTGCTGCAATAGCACCTAGCGTTGGGTTCCCTTTGGAAACGTCAACCGGGAGCTACATCCCTAATCACTCACAACCTTGACCAATTTGGAGATGTTGCTTAATTATATTATTATTCTAATTAAGAAATTAGGATGAATTTAAGGGTTGTGAAAAATGAAAGCCCTCTATTATATCTCTCTCCGT 942 44.37 MTQDLIGSDRFRDFNPMENDDLKSEDQMEIMMMMQQMEKIPEFYNDFSPPSSDFSSSTTDHPHCHLDSSSSPPPLFINNPPYNFPQQSTVPFPATTSRWRNSGGETESLRKQRSVAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAAAGAGAGNRPITGGAAIAPSVGFPLETSTGSYIPNHSQP 247
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 84666961 84667902 + XM_039043906.1 Bhi09g03309 45926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03309 247 Pfam Helix-loop-helix DNA-binding domain 158 197 IPR011598 GO:0046983
Bhi09g03309 247 MobiDBLite consensus disorder prediction 89 103 - -
Bhi09g03309 247 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 17 221 IPR045843 GO:0003700|GO:0006355
Bhi09g03309 247 MobiDBLite consensus disorder prediction 1 20 - -
Bhi09g03309 247 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 148 197 IPR011598 GO:0046983
Bhi09g03309 247 PANTHER BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN 17 221 - -
Bhi09g03309 247 Gene3D - 151 212 IPR036638 GO:0046983
Bhi09g03309 247 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 153 206 IPR036638 GO:0046983
Bhi09g03309 247 MobiDBLite consensus disorder prediction 89 111 - -
Bhi09g03309 247 MobiDBLite consensus disorder prediction 48 71 - -
Bhi09g03309 247 MobiDBLite consensus disorder prediction 48 66 - -
Bhi09g03309 247 SMART finulus 154 203 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi04g00360 Bhi09g03309 CCT
Bhi04g00360 Bhi09g03309 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g00406 Bhi-Chr9:8382627 Bhi09g03309 Bhi-Chr9:84666961 4.30E-31 dispersed
Bhi09g00407 Bhi-Chr9:8382627 Bhi09g03309 Bhi-Chr9:84666961 4.30E-31 dispersed
Bhi09g03309 Bhi-Chr9:84666961 Bhi09g03235 Bhi-Chr9:83139325 6.02E-21 dispersed
Bhi03g01358 Bhi-Chr3:28323433 Bhi09g03309 Bhi-Chr9:84666961 7.65E-36 transposed
Bhi03g02167 Bhi-Chr3:47069768 Bhi09g03309 Bhi-Chr9:84666961 1.09E-19 transposed
Bhi04g00360 Bhi-Chr4:8864528 Bhi09g03309 Bhi-Chr9:84666961 6.29E-42 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2030 PF00010 HLH 1.70E-06 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03309 - - bhj:120087062 454.907