Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03313 TCTTTCTATCTTCTTCTTCCAATATTTTCTTCTTGGCTTTAATTTGAGAGAAATAATATATTTTTTCCAAAAAAAAATGGATTTGATGGAAAGTGAATTTAGTAAAAATTATGTGATATTGAAGCCAGAGAATGCAAATTTGTTGGATCTGTTTCTATTCTTACTTCCATTTGGATTAAGAAAGAGAAAGTTCATTGATTGTCCACTTGGCAAAGAAGATCCTTTCAAAAACTTCAGAGATCGATGGCTAATTTTCATCTCCATGTTGCTTCAGTTTATCCTAGCCATCATTGCCACTCCTCTTGCCAAGTTAGACTCATTTCTCCTTAAACTGTTAAACTTCATCTCCTTCAACGGCGGCGTTTCGGGGATTCTCTCTAAAATTCTCAAAGGAAAGAGTTTTCTGGAGGTTAATGAAGATTCGCCGGAGTATACATCGGTGGTCGGATTTGCAGATTGGAGGAGAGATTTGGATTCGTCAATTAAACCCGACGACACTTTCAGATATTATAGTGCCTTAACTGTAATGGCTGCCAAAGTCTCTTATGAATCCAAACCATTTGTTCAATCCGTCGTAAATGATCGTTGGAAGATGAAGTTGCTGGGTTACTTCAATTTTTGGAATGACTTTCAAGGTAAAGCAACTACTCAAGCCTTTATGTTTGAAAACACAGCCATTGATCCCAATGTAATAGTGGTTGCATTCAGAGGCACCTCCCTTCTTGACTCATACGATTGGCAAGTCGATGCTGACTTCTCTTGGTACGAGATCGAGGGCGTCGGCCGCATCCACAGTGGGTTCATGAAAGCCCTAGGCCTTCAAAAGGCCACAGGATGGCCGAAGGAGCTTCCCAAATCTCAACTACAAGAGTTTGCATATTACACCATCCGGCAAAAACTTAGAGACATTGCCAAAACCAACGACAAGGCAAGGTTCATCATCACTGGGCACAGTTTGGGTGGAGCCTTGGCTACCTTATTTGTCACTGTATTGAGCCTACATGATGAATCAACCATTTTGGAGAAATTGGAAGGCATTTACACGTATGGCCAGCCAAGAGTTGGCGACCAACAGTTCGCAAAGTTTATGGTTAACACTGTCCAAAAATATGGCTTCAAATATCATAGATATGTTTACTCTTCTGACTTGGTGCCTAGACTTCCTTCTGATGCCATCCTTTTCAAATACAAACACTTTGGTAGATGTGTCTTCTTCAACACCCTCTACAGAGGCAGGATTGTGAAGGAGCAGCCAAACAAGAACTACTTCTCGTTGGTATGGGTGATACCCAAGTATTTAAGCGCATGGTGGGAGCTAATAAGGAGTTTGATAATCCCATTGGTGAAGGGTTTTGATTACTATGAGAGTTTGTTGATGAAGGGGGGAAGGGTGGTTGGACTATTCATTCCAGGGCTCGCTGCTCATTTTCCCTTGAACTATGTTAATTCCACTCGTTTGGGTAAATTAAATGTACCCGACAAGGTCGAAGACCCCATTCTTGGAGATGATATTGAAGACGACTTTTAAATAAGTGTGAACATGCATGTCAATATCGTTAAACTAGACTCACCTTAACGGTTTATGTAACCTTCTAATTAGCTAAAACATGTGTTGAAAGATTAATTAGTATGTTGTGTGCACGTGGTATGGAATATTCAGCTTCTTAAACTTTCTCTATATAAACTAAA 1689 40.02 MDLMESEFSKNYVILKPENANLLDLFLFLLPFGLRKRKFIDCPLGKEDPFKNFRDRWLIFISMLLQFILAIIATPLAKLDSFLLKLLNFISFNGGVSGILSKILKGKSFLEVNEDSPEYTSVVGFADWRRDLDSSIKPDDTFRYYSALTVMAAKVSYESKPFVQSVVNDRWKMKLLGYFNFWNDFQGKATTQAFMFENTAIDPNVIVVAFRGTSLLDSYDWQVDADFSWYEIEGVGRIHSGFMKALGLQKATGWPKELPKSQLQEFAYYTIRQKLRDIAKTNDKARFIITGHSLGGALATLFVTVLSLHDESTILEKLEGIYTYGQPRVGDQQFAKFMVNTVQKYGFKYHRYVYSSDLVPRLPSDAILFKYKHFGRCVFFNTLYRGRIVKEQPNKNYFSLVWVIPKYLSAWWELIRSLIIPLVKGFDYYESLLMKGGRVVGLFIPGLAAHFPLNYVNSTRLGKLNVPDKVEDPILGDDIEDDF 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 84998226 85003776 + XM_039043663.1 Bhi09g03313 45930

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03313 483 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 5 468 - -
Bhi09g03313 483 CDD Lipase_3 142 381 - -
Bhi09g03313 483 Pfam Lipase (class 3) 207 365 IPR002921 GO:0006629
Bhi09g03313 483 Gene3D alpha/beta hydrolase 131 401 IPR029058 -
Bhi09g03313 483 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 5 468 IPR044819 GO:0004806|GO:0006629
Bhi09g03313 483 SUPERFAMILY alpha/beta-Hydrolases 151 396 IPR029058 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03313 - - - csv:101203640 835.869
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01838 Bhi-Chr3:38829647 Bhi09g03313 Bhi-Chr9:84998226 4.50E-122 dispersed
Bhi03g01839 Bhi-Chr3:38974979 Bhi09g03313 Bhi-Chr9:84998226 1.39E-145 dispersed
Bhi09g03311 Bhi-Chr9:84855057 Bhi09g03313 Bhi-Chr9:84998226 1.20E-112 dispersed
Bhi10g02170 Bhi-Chr10:55032222 Bhi09g03313 Bhi-Chr9:84998226 1.23E-94 dispersed
Bhi09g03312 Bhi-Chr9:84893510 Bhi09g03313 Bhi-Chr9:84998226 8.43E-166 tandem
Bhi09g03313 Bhi-Chr9:84998226 Bhi09g03314 Bhi-Chr9:85052117 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g755 . . . . . . . . . . Cma01g01835 Cma09g00234 . . . Cpe06g00163 . . . . . . . . . . . . . . . . Cone7ag1369 . . Lsi04g01552 Csa04g02414 . . . . . . . . . . Sed01g2671 Cmo01g01895 Cmo09g00228 . . . . . Cpe02g00184 Bhi09g03313 Tan01g4775 Cmetu07g1301 . . Mch11g0294 . Cla05g02045 Cam05g2196 Cec05g2214 Cco05g2259 Clacu05g2190 Cmu05g2056 Cre05g2185 . . Chy07g00138 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002909 0 2 0 1 0 2 0 2 2 2 1 2 3 3 2 4 2 1 3 2 2 1 2 4 3 2 1 1 5 0 55