Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03327 TACAAAAGGAACGGCAAAACAAAAACTAGAACAGTAGGAATCTTCCTTCCATTTGTATATATAACAACATTCAGTTCTTCTCCTGTTCAGATTTATTAACGGGGAAAGGAGGATTTGTTCGTGATTGTTTACCGCCAAATCTTTATCGCAATCATCGAGCGGAGAAACATTCAAGTTTTTTATCACCAAGGACAGCAATGCCGCCGTTTCTGTCTACCTCGAAGGTCGTTGAGTCATTGATTTCGCGTAGAGGTGGTATCAGACATGCGATCAAATACGCTAGGTGTAATGCCGAGTCGTGGAAGTATCAAAACGTTCGACATTTAAGGTGTATTCCCGGCGTTCAGACCTCGACGATTTATAGACTGTTCGATCAGGACCGTAAGATTTCCGAGAGCTTCCGTGATATTAGTGCTGTACAATCGAGACGATTTCTTGGCTGTGGAGACGGGGCAGAGACCGGCGTTTTATCCAAAATTTATGAAGAGAGGCGCGTAATGGGGTATTCTCCGGAACAGTTATTTGACGTAGTTGCTGCTGTAGACATGTACCATGATTTTGTTCCTTGGTGCCAGCGGTCAGAGGTACTAAAAAAGTATCCTGATGGATCCTTTGATGCTGAACTAGAGATTGGCTTTAAATTTCTTGTTGAGAGTTACATTTCACACGTAGAGATGAACAGACCAAAATCTATAAAGACTACAGTATCTCGAAGTGCGCTTTTTGACCACTTGATAAATACTTGGGAGTTCAATCCGGGACCGATTCCAGGGACTTGCAACCTTTACTTTTTGGTAGATTTTAAGTTCCAGTCTCCACTTTATCGACAGGTGGCTTCAGTGTTCTTTAAGGAGGTCGTCTCAAAACTGGTTGGTTCATTTAATGAACGCTGCCGTTTGATATATGGTCCAGGGGTTCCAGTCCTTGAAAATTCATACAGCCAACGAGCTTAAATTTGTTGAAATTTTTCATAAGATGTATCATTTGATTGAGGATATTTAGCGAGAATGAATTTAGAATTGACAGAATCCTCATAGAGAGCAGATAGGGAAGTAGAAGTATCCTAAATTTGACTGATTAATGCACCTTCTGGGTAACTTGCAGCTTGCTTATTTTGCTGTGGCCCATCAAAAGACATTAATTATTTGGTTGAATTTTCATTTGTTTTCTTTTATTTCTAGTTCTTGTAATTGTTCACCTTTTCTTGTTTAACATTTAGAGTATGATTCGACACCTT 1237 40.02 MPPFLSTSKVVESLISRRGGIRHAIKYARCNAESWKYQNVRHLRCIPGVQTSTIYRLFDQDRKISESFRDISAVQSRRFLGCGDGAETGVLSKIYEERRVMGYSPEQLFDVVAAVDMYHDFVPWCQRSEVLKKYPDGSFDAELEIGFKFLVESYISHVEMNRPKSIKTTVSRSALFDHLINTWEFNPGPIPGTCNLYFLVDFKFQSPLYRQVASVFFKEVVSKLVGSFNERCRLIYGPGVPVLENSYSQRA 251
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 85169577 85173687 + XM_039041217.1 Bhi09g03327 45944

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03327 251 CDD COQ10p_like 95 233 IPR044996 GO:0006744|GO:0045333|GO:0048039
Bhi09g03327 251 Pfam Polyketide cyclase / dehydrase and lipid transport 101 228 IPR005031 -
Bhi09g03327 251 PANTHER COENZYME Q-BINDING PROTEIN COQ10, MITOCHONDRIAL 1 250 - -
Bhi09g03327 251 SUPERFAMILY Bet v1-like 95 237 - -
Bhi09g03327 251 Gene3D - 93 237 IPR023393 -
Bhi09g03327 251 PANTHER SPERM PROTEIN HOMOLOG 1 250 IPR044996 GO:0006744|GO:0045333|GO:0048039
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03327 K18588 COQ10; coenzyme Q-binding protein COQ10 - csv:101214157 484.182
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g764 Blo01g01530 Blo12g00957 Bda01g00566 . Bpe02g00427 . . Bma01g02276 . . Cma01g01839 Cma09g00228 Car01g01433 . . Cpe06g00159 . . . . . . . . . . . . . . . Cone4ag1575 . Cone17ag0844 Cone20ag0191 . Csa04g02407 . . . . . . . . . . . Cmo01g01898 Cmo09g00220 . . . Car09g00196 . . Bhi09g03327 . . . Hepe01g1761 Mch11g0287 . . . . . . . . . . Chy07g00131 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008704 0 1 2 1 0 1 2 1 1 1 1 1 1 1 1 2 1 3 1 1 1 1 1 1 1 0 1 4 0 1 34