Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03450 AAGATTTAGTTCTTTGGAGCTTATTGGAAGAGGATCTTTTGGTGATGTCTACAAGGGGTTTGACAAGGAGCTTAACAAAGAAGTTGCTATCAAAGTTATTGATTTGGAAGAATCTGAGGATGAAATTGAAGATATTCAAAAGTTTTGTGCCAGGAAATTTCTGTTTTGTCACAATGTCGATCACCCTACATTACTGAGTACTATGGTTCTTATCTCCACCAGACGAAATTATGGATAATAATGGAATATATGGCTGGTGGCTCTGTTGCAGATCTGCTTCAGTCTGGGCCGCCACTTGATGAAATGTCAATTGCATGCATTCTACGGGATTTGCTGCATGCAATTGATTATTTGCACACTGAAGGAAAAATTCACAGGGACATTAAAGCGGCAAACATTTTACTGAGTGAAAATGGTGATGTTAAGGTTGCAGATTTTGGTGTATCTGCTCAATTAACAAGGACAATATCAAGGAGAAAGACATTTGTAGGAACTCCATTTTGGATGGCGCCAGAGGTAATTCAGAATTCTGAAGGATACAATGAGAAGGCAGATATCTGGTCTCTAGGAATCACTGCTATTGAAATGGCAAAAGGGGAGCCTCCACTTGCCGATCTTCATCCCATGAGAGTTCTTTTTATCATACCTCGAGAAAATCCACCTCAGTTGGATGAACATTTTTCTCGCCCTATGAAAGAATTAGTGTCACTGTGTCTGAAGAAAATACCTGCTGAGAGACCCAGTGCGAAAGAGCTTCTGAAGCACCGATTCATTAAGAATGCCAGGAAGAGTCCTAGGCTTCTGGAGAGAATAAGAGAACGTCCGAAGTACCAAATAAAGGAAGAAGATGCAGCAACAAATGGCCCTAGAGCTATAGGTGAAACATCAGACACTGTGAAAGTTTCAAGAAATGTTAGAGAAGAAACTGTTCGTGCCAGCAACCAGAGTAAAACTCCAAAGAATGCTGGATGGGACTTTAGTATTGGGGGACCACATAGTACAGGTACTGTTCGAAGTGTAGTAAAACCACCTCAAATTAGGGAAAGAAAACCAGAAATTCCTTATGGTCAGGCTGCACCTAGTAGAGTTGCAGAGAGTGGTAACTGGCTAGCTGCGTCAGGATATGCACCACGCGATGTATCAGAAAACACTAGAGATTCATACAGTACTGGAGATGCTAGTGATGATGAAGAGTTATCTGTAAGTGGTTCAGGAACCGTTGTGATCCGGTCTCCAAGGCGATCTCAAGCATCTACTCAATTTCATAATGAAAGCAGTCCGTCTGGAAGTGCGCAAGCATATATCGAGGACACATCTTTTAGTGGTACTGTTGTTATGCGTGGTCAACGTGATGATTCTGATTCTCCTCAGACTCCAAAATCCAGATTGGGAATTCAAGAAAGGACTTCAAGTTTTTCTCCTGAAGATAGTGCATCAAATCTTGCGGAGGCAAAAGCTGCGATTCAAGCAGGATTGAAGAAAGCTAATGCAAGGGATAGATCAGCTAATAAACTCAACGACAGGAAGGAAAATAGAAGAACAGAGCAAACAGTGAGTAGCTCTGACTCTTCAAGGCATTCTCGTGAATTCTTTGATGCGCCAAGAGCGTTGAAACCATCTCTATCAATTGATGAGGAAGAAAGTGCAAAAATAGCATCGTCTTCTGCACCATTATCAGTTTTGTTTATGTCATCCTTGAAAGAGGTAGTTGCAGATGATTCGGAAGGATCGCCTGCTCGTAATGTAATTAATGCACTTATAAACCTGGAACATGTAAAGCCTGGATCATGTGAGGTTCTTGTTACCAAGTTGCTTCAGAAATTGGCCAGCAGTTCCAAGGAATCTTCACTGAAGGATTTACAAGACTTGGCAACTCGCTTATTCACTAAGGCAAAGACAGTTCCTGAAGATGCACAAAATGTCACAGATTCTGATAGCAGCAAAAAGCAACCGAACAGGGAACTTCATTCAAATTCTAATTTGAGCTCGCTTGCTAGATTTTTACTCTCCAGATGGCAAGGTCAGGTGTCGAGGGATCTGAGTCCAGCTTAAAAGGGAGAAAAATTGTGTATTTGTTTGATATTTTTTATTCTTGACAGTGCATTATTTGAGTTGATGTACATACGTCGTTGTAAGAAATGGTGTATTAATTATTAATTGTGATTTTTCCTTATGAAATTTTTGTTTTGCTATTCATTGCATTGACATTTGTATTATTATTAAAACCTGAGATTGATGAATAATTGCTATTGAAATGCTGTGAATAGTGGAGAGTTTGAATTTTGAACA 2289 40.06 MEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAIDYLHTEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPMKELVSLCLKKIPAERPSAKELLKHRFIKNARKSPRLLERIRERPKYQIKEEDAATNGPRAIGETSDTVKVSRNVREETVRASNQSKTPKNAGWDFSIGGPHSTGTVRSVVKPPQIRERKPEIPYGQAAPSRVAESGNWLAASGYAPRDVSENTRDSYSTGDASDDEELSVSGSGTVVIRSPRRSQASTQFHNESSPSGSAQAYIEDTSFSGTVVMRGQRDDSDSPQTPKSRLGIQERTSSFSPEDSASNLAEAKAAIQAGLKKANARDRSANKLNDRKENRRTEQTVSSSDSSRHSREFFDAPRALKPSLSIDEEESAKIASSSAPLSVLFMSSLKEVVADDSEGSPARNVINALINLEHVKPGSCEVLVTKLLQKLASSSKESSLKDLQDLATRLFTKAKTVPEDAQNVTDSDSSKKQPNRELHSNSNLSSLARFLLSRWQGQVSRDLSPA 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 87311993 87325500 + XM_039041700.1 Bhi09g03450 46067

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03450 603 MobiDBLite consensus disorder prediction 412 452 - -
Bhi09g03450 603 MobiDBLite consensus disorder prediction 200 283 - -
Bhi09g03450 603 SMART serkin_6 1 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g03450 603 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 601 - -
Bhi09g03450 603 MobiDBLite consensus disorder prediction 555 578 - -
Bhi09g03450 603 MobiDBLite consensus disorder prediction 366 400 - -
Bhi09g03450 603 MobiDBLite consensus disorder prediction 417 436 - -
Bhi09g03450 603 Pfam Protein kinase domain 1 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g03450 603 MobiDBLite consensus disorder prediction 228 242 - -
Bhi09g03450 603 MobiDBLite consensus disorder prediction 295 352 - -
Bhi09g03450 603 SUPERFAMILY Protein kinase-like (PK-like) 1 241 IPR011009 -
Bhi09g03450 603 MobiDBLite consensus disorder prediction 366 398 - -
Bhi09g03450 603 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 601 - -
Bhi09g03450 603 MobiDBLite consensus disorder prediction 300 352 - -
Bhi09g03450 603 ProSiteProfiles Protein kinase domain profile. 1 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g03450 603 Gene3D Transferase(Phosphotransferase) domain 1 1 213 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03450 K08838 STK24_25_MST4; serine/threonine-protein kinase 24/25/MST4 [EC:2.7.11.1] - csv:101214412 1075.85
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g03448 Bhi-Chr9:87311110 Bhi09g03450 Bhi-Chr9:87311993 0 dispersed
Bhi09g03450 Bhi-Chr9:87311993 Bhi07g00260 Bhi-Chr7:12030821 3.20E-60 dispersed
Bhi09g03449 Bhi-Chr9:87311112 Bhi09g03450 Bhi-Chr9:87311993 0 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi09g03449 . 1 689 MAP Kinase Kinase Kinase Kinase AT1G53165 63.7 9.3e-226 780.8
Bhi09g03448 . 1 690 MAP Kinase Kinase Kinase Kinase AT1G53165 63.6 2.3e-224 776.2
Bhi09g03450 . 1 601 MAP Kinase Kinase Kinase Kinase AT1G53165 60.5 2.7e-180 629.8
Bhi07g00260 . 268 528 MAP Kinase Kinase Kinase Kinase AT1G53165 53.1 5.2e-67 253.4
Bhi09g03449 . 1 688 MAP Kinase Kinase Kinase Kinase AT3G15220 65.6 2.8e-230 795.8
Bhi09g03448 . 1 689 MAP Kinase Kinase Kinase Kinase AT3G15220 65.5 5.3e-229 791.6
Bhi09g03450 . 1 600 MAP Kinase Kinase Kinase Kinase AT3G15220 62.3 8.9e-184 641.3
Bhi07g00260 . 268 528 MAP Kinase Kinase Kinase Kinase AT3G15220 51.5 2.3e-67 254.6
Bhi07g00260 . 3 840 MAP Kinase Kinase Kinase Kinase AT1G69220 58.1 1.4e-241 833.6
Bhi06g00519 . 1 668 MAP Kinase Kinase Kinase Kinase AT5G14720 66.6 7.2e-255 877.5
Bhi06g00521 . 1 668 MAP Kinase Kinase Kinase Kinase AT5G14720 66.6 7.2e-255 877.5
Bhi06g00523 . 1 668 MAP Kinase Kinase Kinase Kinase AT5G14720 66.6 7.2e-255 877.5
Bhi06g00520 . 1 668 MAP Kinase Kinase Kinase Kinase AT5G14720 66.6 7.2e-255 877.5
Bhi06g00522 . 1 668 MAP Kinase Kinase Kinase Kinase AT5G14720 66.6 7.2e-255 877.5
Bhi06g00524 . 1 668 MAP Kinase Kinase Kinase Kinase AT5G14720 66.6 7.2e-255 877.5
Bhi06g00517 . 1 664 MAP Kinase Kinase Kinase Kinase AT5G14720 66.3 9.7e-252 867.1
Bhi06g00518 . 1 547 MAP Kinase Kinase Kinase Kinase AT5G14720 69.2 8.8e-221 764.2
Bhi09g03450 . 1 191 MAP Kinase Kinase Kinase Kinase AT5G14720 50.5 2.6e-47 188.0
Bhi06g00518 . 6 355 MAP Kinase Kinase Kinase Kinase AT4G24100 65.4 7.7e-138 488.8
Bhi11g01446 . 2 348 MAP Kinase Kinase Kinase Kinase AT4G24100 62.8 2.3e-129 460.7
Bhi06g00518 . 7 544 MAP Kinase Kinase Kinase Kinase AT4G10730 50.4 1.0e-139 495.0
Bhi09g03450 . 1 182 MAP Kinase Kinase Kinase Kinase AT4G10730 50.3 3.0e-46 184.5
Bhi06g00518 . 1 422 MAP Kinase Kinase Kinase Kinase AT1G70430 63.4 1.9e-150 530.4
Bhi11g01445 . 4 483 MAP Kinase Kinase Kinase Kinase AT1G70430 52.4 6.2e-133 472.2
Bhi11g01447 . 4 483 MAP Kinase Kinase Kinase Kinase AT1G70430 52.4 6.2e-133 472.2
Bhi11g01446 . 4 483 MAP Kinase Kinase Kinase Kinase AT1G70430 52.4 6.2e-133 472.2
Bhi11g01447 . 1 672 MAP Kinase Kinase Kinase Kinase AT1G79640 60.9 3.1e-218 755.7
Bhi11g01445 . 1 677 MAP Kinase Kinase Kinase Kinase AT1G79640 60.5 2.2e-216 749.6
Bhi11g01446 . 1 625 MAP Kinase Kinase Kinase Kinase AT1G79640 59.3 7.9e-206 714.5
Bhi06g00518 . 6 544 MAP Kinase Kinase Kinase Kinase AT1G79640 53.1 7.0e-154 542.0
Bhi09g03450 . 1 184 MAP Kinase Kinase Kinase Kinase AT1G79640 51.3 2.4e-45 181.4
Bhi06g00519 . 1 328 MAP Kinase Kinase Kinase Kinase AT1G23700 59.2 4.1e-103 372.9
Bhi06g00521 . 1 328 MAP Kinase Kinase Kinase Kinase AT1G23700 59.2 4.1e-103 372.9
Bhi06g00523 . 1 328 MAP Kinase Kinase Kinase Kinase AT1G23700 59.2 4.1e-103 372.9
Bhi06g00520 . 1 328 MAP Kinase Kinase Kinase Kinase AT1G23700 59.2 4.1e-103 372.9
Bhi06g00522 . 1 328 MAP Kinase Kinase Kinase Kinase AT1G23700 59.2 4.1e-103 372.9
Bhi06g00524 . 1 328 MAP Kinase Kinase Kinase Kinase AT1G23700 59.2 4.1e-103 372.9
Bhi06g00517 . 1 328 MAP Kinase Kinase Kinase Kinase AT1G23700 59.2 4.1e-103 372.9
Bhi06g00518 . 1 328 MAP Kinase Kinase Kinase Kinase AT1G23700 59.2 4.1e-103 372.9
Bhi11g01445 . 6 324 MAP Kinase Kinase Kinase Kinase AT1G23700 52.2 5.4e-87 319.3
Bhi11g01447 . 6 324 MAP Kinase Kinase Kinase Kinase AT1G23700 52.2 5.4e-87 319.3
Bhi11g01446 . 6 324 MAP Kinase Kinase Kinase Kinase AT1G23700 52.2 5.4e-87 319.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005838 1 3 1 1 1 0 2 1 0 1 1 1 2 1 1 2 0 3 2 1 1 1 1 1 1 1 1 2 1 1 36
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88184 PF00069 Pkinase 1.40E-45 CL0016 Bhi PK