Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03458 TTCATTTTCCCCTCAAATCTCAATCCACACCATTTTCTGTCTCTCTTACTTGAATCCTAATTTCCTCTCTCCACCGCGTATTTTACCAAACTAACAGTGTCGTAAAAATGGTTGCCGGAGACCGGTCGACATCCACCGCCTCAACCGCCGCGCCGCCCAATTCCAAAGAGATCCGCTACAGGGGCGTCAGAAAGAGGCCGTGGGGCCGCTACGCCGCGGAAATCCGGGACCCACGTAAGAAGACTAGGGTTTGGCTCGGCACATTCAATACCGCCGAAGAAGCGGCGCGTGCTTACGACACGGCCGCGCGTGAATTTAGGGGCGCAAATGCCAAAACCAATTTTCCCATTCAGAACGAATTCCTAATGGTTGACAACAATAACAACTTCCATAAATCCGCTTGCAGTACTAGTCCCAGCCAGAGCAGCACCGTCGACTCCTCTTCCCCGTCGCCGGCGCCGTCGGATCCTTCCCTCACTCACTTCCTCAACAGCAGCAATCACGCGCCGACTATTTCCCGCCCAATTTTCTTCTTCGACGCGTTTGCTCAGGCGGAGAGGATCAGTGAGTTTCGTCGGAACGTTACCAACGCCGTCGCCGGTGCTGGCGGATCGGTGAGCGACTCCGATTCGTCATCCGTAGTTGATTTCGACACTACGCGAAAATCTCGGCCGTTGGATTTTGACCTGAATCTTCCGGCTGTGGAAGTTGTTTGAGGATCCGTGTTTTTCATTTTGAATTGAACTAATTTTTCTAATTTAATATCCGTAAAATCCATTTAAAGGATTGAATGAAATATATATTATATAATTAATATAAGTTATGTTGTATAGATAACCAAGGAATTCCTCCTTCCAGTTTTAATGAAGAGATTTGATTTTTTTTTTTT 889 47.81 MVAGDRSTSTASTAAPPNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGANAKTNFPIQNEFLMVDNNNNFHKSACSTSPSQSSTVDSSSPSPAPSDPSLTHFLNSSNHAPTISRPIFFFDAFAQAERISEFRRNVTNAVAGAGGSVSDSDSSSVVDFDTTRKSRPLDFDLNLPAVEVV 202
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 87434055 87434943 - XM_039041073.1 Bhi09g03458 46075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03458 202 SUPERFAMILY DNA-binding domain 23 82 IPR016177 GO:0003677
Bhi09g03458 202 MobiDBLite consensus disorder prediction 1 25 - -
Bhi09g03458 202 PIRSF PTI6 139 192 IPR017392 GO:0003700
Bhi09g03458 202 PIRSF PTI6 3 132 IPR017392 GO:0003700
Bhi09g03458 202 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
Bhi09g03458 202 Pfam AP2 domain 23 72 IPR001471 GO:0003700|GO:0006355
Bhi09g03458 202 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Bhi09g03458 202 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Bhi09g03458 202 CDD AP2 23 82 IPR001471 GO:0003700|GO:0006355
Bhi09g03458 202 PANTHER ERF FAMILY PROTEIN 134 191 - -
Bhi09g03458 202 PANTHER ERF FAMILY PROTEIN 5 134 - -
Bhi09g03458 202 Gene3D AP2/ERF domain 22 82 IPR036955 GO:0003700|GO:0006355
Bhi09g03458 202 MobiDBLite consensus disorder prediction 96 126 - -
Bhi09g03458 202 MobiDBLite consensus disorder prediction 1 17 - -
Bhi09g03458 202 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 5 134 - -
Bhi09g03458 202 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 134 191 - -
Bhi09g03458 202 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00387 Bhi-Chr3:7858376 Bhi09g03458 Bhi-Chr9:87434055 5.26E-33 dispersed
Bhi05g01949 Bhi-Chr5:60407070 Bhi09g03458 Bhi-Chr9:87434055 1.36E-34 dispersed
Bhi08g02269 Bhi-Chr8:64765202 Bhi09g03458 Bhi-Chr9:87434055 5.64E-33 dispersed
Bhi09g03458 Bhi-Chr9:87434055 Bhi11g00585 Bhi-Chr11:13309705 3.34E-28 dispersed
Bhi12g02034 Bhi-Chr12:63493325 Bhi09g03458 Bhi-Chr9:87434055 1.17E-24 dispersed
Bhi09g03458 Bhi-Chr9:87434055 Bhi10g01055 Bhi-Chr10:21193586 2.95E-35 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2033 PF00847 AP2 4.20E-14 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03458 K09286 - csv:101213540 255.373